Residue	Ribonucleotide	Distance	Base Pair	Hbond nuc:res	Base Stack Type	Residue conservation
[GLY]Aw:2	[G]A2:666	4.94	[C]A2:1163			59.7
[GLY]Aw:2	[A]A2:672	4.23	[U]A2:1162			59.7
[GLY]Aw:2	[G]A2:1090	3.28	[U]A2:1161	base:BB		59.7
[GLY]Aw:2	[U]A2:1161	3.11	[G]A2:1090	base:BB		59.7
[GLY]Aw:2	[U]A2:1162	2.84	[A]A2:672	base:BB		59.7
[GLY]Aw:2	[C]A2:1163	4.0	[G]A2:666			59.7
[LYS]Aw:3	[G]A2:660	3.38	[G]A2:1166	sugar:SC		76.62
[LYS]Aw:3	[C]A2:661	3.31				76.62
[LYS]Aw:3	[U]A2:662	2.92	[G]A2:421			76.62
[LYS]Aw:3	[G]A2:663	3.92	[G]A2:420			76.62
[LYS]Aw:3	[C]A2:664	2.68	[G]A2:1165			76.62
[LYS]Aw:3	[U]A2:1161	3.85	[G]A2:1090			76.62
[CYS]Aw:4	[PSU]A2:682	4.77	[A]A2:1025			11.49
[CYS]Aw:4	[U]A2:1161	3.54	[G]A2:1090			11.49
[CYS]Aw:4	[U]A2:1162	3.29	[A]A2:672			11.49
[ARG]Aw:5	[C]A2:661	4.9				28.41
[ARG]Aw:5	[U]A2:662	3.05	[G]A2:421			28.41
[ARG]Aw:5	[G]A2:1158	3.18				28.41
[ARG]Aw:5	[G]A2:1159	4.57	[C]A2:1092			28.41
[ARG]Aw:5	[G]A2:1160	3.29	[C]A2:1091			28.41
[ARG]Aw:5	[U]A2:1161	2.85	[G]A2:1090			28.41
[GLY]Aw:6	[PSU]A2:682	4.29	[A]A2:1025			76.94
[GLY]Aw:6	[U]A2:683	3.54	[A]A2:1024			76.94
[GLY]Aw:6	[G]A2:1160	4.86	[C]A2:1091			76.94
[GLY]Aw:6	[U]A2:1161	3.17	[G]A2:1090			76.94
[LEU]Aw:7	[PSU]A2:682	4.89	[A]A2:1025			34.4
[LEU]Aw:7	[U]A2:683	3.17	[A]A2:1024			34.4
[ARG]Aw:8	[PSU]A2:682	3.15	[A]A2:1025			9.91
[ARG]Aw:8	[U]A2:683	2.85	[A]A2:1024			9.91
[ARG]Aw:8	[OMG]A2:684	4.44				9.91
[THR]Aw:9	[PSU]A2:682	3.34	[A]A2:1025			67.81
[THR]Aw:9	[U]A2:683	4.7	[A]A2:1024			67.81
[THR]Aw:9	[U]A2:1161	3.81	[G]A2:1090			67.81
[ARG]Aw:11	[C]A2:400	3.31				64.88
[ARG]Aw:11	[C]A2:401	4.22	[A]A2:364			64.88
[LYS]Aw:12	[U]A2:1162	3.75	[A]A2:672			58.39
[LYS]Aw:12	[C]A2:1163	2.73	[G]A2:666			58.39
[LEU]Aw:13	[C]A2:661	4.24				78.78
[ARG]Aw:14	[C]A2:358	3.56	[G]A2:406			8.65
[HIS]Aw:16	[C]A2:1164	3.43	[A]A2:665			38.6
[ARG]Aw:17	[U]A2:659	3.22				66.88
[ARG]Aw:17	[G]A2:660	3.17	[G]A2:1166	base:SC		66.88
[ARG]Aw:17	[C]A2:661	2.9				66.88
[ARG]Aw:17	[C]A2:664	4.74	[G]A2:1165			66.88
[ARG]Aw:17	[G]A2:1166	4.4	[G]A2:660			66.88
[ARG]Aw:18	[C]A2:359	3.24	[G]A2:405			32.6
[ARG]Aw:18	[U]A2:360	3.09	[G]A2:404			32.6
[ASP]Aw:19	[U]A2:360	4.54	[G]A2:404			4.08
[GLN]Aw:20	[U]A2:659	2.92		base:BB		8.07
[GLN]Aw:20	[G]A2:1165	3.61	[C]A2:664			8.07
[GLN]Aw:20	[G]A2:1166	2.68	[G]A2:660	base:SC		8.07
[LYS]Aw:21	[U]A2:423	4.69	[A]A2:416			67.3
[LYS]Aw:21	[U]A2:424	4.64	[A]A2:415			67.3
[LYS]Aw:21	[U]A2:659	3.61				67.3
[TRP]Aw:22	[C]A2:359	3.23	[G]A2:405			5.87
[TRP]Aw:22	[U]A2:360	2.64	[G]A2:404			5.87
[HIS]Aw:23	[U]A2:659	3.42				27.55
[HIS]Aw:23	[G]A2:1165	4.0	[C]A2:664			27.55
[HIS]Aw:23	[G]A2:1166	3.09	[G]A2:660	sugar:BB		27.55
[HIS]Aw:23	[G]A2:1167	4.73	[U]A2:1194			27.55
[ASP]Aw:24	[U]A2:658	4.23				25.4
[ASP]Aw:24	[U]A2:659	3.35				25.4
[ASP]Aw:24	[G]A2:1166	3.84	[G]A2:660			25.4
[LYS]Aw:25	[G]A2:1166	4.56	[G]A2:660			24.38
[LYS]Aw:25	[G]A2:1167	2.98	[U]A2:1194	base:SC		24.38
[LYS]Aw:25	[G]A2:1168	3.98	[U]A2:1193	base:SC		24.38
[LYS]Aw:25	[U]A2:1193	4.48	[G]A2:1168			24.38
[LYS]Aw:25	[U]A2:1194	4.8	[G]A2:1167			24.38
[GLN]Aw:26	[C]A2:18	3.53	[G]A2:6			0.03
[TYR]Aw:27	[C]A2:359	4.55	[G]A2:405			32.72
[TYR]Aw:27	[U]A2:424	4.86	[A]A2:415			32.72
[LYS]Aw:28	[A]A2:1189	3.26	[U]A2:1173			16.98
[LYS]Aw:28	[A]A2:1190	3.13	[A]A2:1171			16.98
[LYS]Aw:29	[A]A2:651	4.11	[C]A2:24			25.53
[ALA]Aw:30	[PSU]A2:652	3.65	[G]A2:23			42.65
[HIS]Aw:31	[U]A2:424	4.78	[A]A2:415			41.24
[LEU]Aw:32	[A]A2:1189	4.7	[U]A2:1173			13.45
[LEU]Aw:32	[A]A2:1190	3.62	[A]A2:1171			13.45
[THR]Aw:34	[A]A2:1190	3.04	[A]A2:1171			23.89
[THR]Aw:34	[A]A2:1191	3.7	[G]A2:1170			23.89
[ALA]Aw:35	[A]A2:1190	4.9	[A]A2:1171			9.37
[ALA]Aw:35	[A]A2:1191	3.67	[G]A2:1170			9.37
[LEU]Aw:36	[G]A2:408	3.42				4.52
[LYS]Aw:37	[G]A2:408	4.41				42.52
[LYS]Aw:37	[U]A2:1811	3.48	[A]A2:1725			42.52
[LYS]Aw:37	[C]A2:1812	2.47	[G]A2:1724			42.52
[ALA]Aw:38	[A]A2:1191	3.67	[G]A2:1170			3.7
[ALA]Aw:38	[C]A2:1192	4.04	[G]A2:1169			3.7
[GLY]Aw:42	[G]A2:408	3.76		base:BB		7.84
[GLY]Aw:43	[PSU]A2:650	3.86	[A]A2:25			69.02
[ALA]Aw:44	[C]A2:484	3.69				51.87
[ALA]Aw:44	[PSU]A2:650	4.79	[A]A2:25			51.87
[SER]Aw:45	[U]A2:26	4.42	[A]A2:649			75.88
[SER]Aw:45	[A2M]A2:27	4.33	[U]A2:648			75.88
[SER]Aw:45	[C]A2:484	4.18				75.88
[SER]Aw:45	[A]A2:649	2.84	[U]A2:26	sugar:BB		75.88
[SER]Aw:45	[PSU]A2:650	3.61	[A]A2:25			75.88
[HIS]Aw:46	[A2M]A2:27	3.33	[U]A2:648			66.81
[HIS]Aw:46	[U]A2:28	4.77	[G]A2:647			66.81
[HIS]Aw:46	[C]A2:484	3.42				66.81
[HIS]Aw:46	[U]A2:648	4.8	[A2M]A2:27			66.81
[HIS]Aw:46	[A]A2:649	3.42	[U]A2:26			66.81
[ALA]Aw:47	[C]A2:484	3.2				57.76
[LYS]Aw:48	[C]A2:484	3.1				47.0
[LYS]Aw:48	[A2M]A2:485	3.73				47.0
[LYS]Aw:60	[U]A2:1193	4.87	[G]A2:1168			70.66
[LYS]Aw:60	[U]A2:1194	2.45	[G]A2:1167			70.66
[LYS]Aw:60	[A]A2:1195	4.82				70.66
[GLN]Aw:61	[A]A2:1825	2.8				86.82
[HY3]Aw:62	[C]A2:615	3.91				0.0
[HY3]Aw:62	[G]A2:626	4.41				0.0
[ASN]Aw:63	[C]A2:615	4.43				96.29
[ASN]Aw:63	[C]A2:619	4.2	[G]A2:624			96.29
[ASN]Aw:63	[A]A2:620	4.76				96.29
[ASN]Aw:63	[G]A2:624	2.85	[C]A2:619	base:SC		96.29
[ASN]Aw:63	[C]A2:625	2.99	[G]A2:618	base:SC		96.29
[ASN]Aw:63	[G]A2:626	3.2	[A]A2:617	base:SC		96.29
[SER]Aw:64	[C]A2:615	2.56		base:SC, sugar:SC		98.72
[SER]Aw:64	[C]A2:616	3.61				98.72
[SER]Aw:64	[A]A2:617	4.86	[G]A2:626			98.72
[SER]Aw:64	[G]A2:626	3.13	[A]A2:617	base:BB,  base:BB		98.72
[SER]Aw:64	[G]A2:627	4.65				98.72
[ALA]Aw:65	[C]A2:616	4.54				82.64
[ALA]Aw:65	[A]A2:617	3.49	[G]A2:626			82.64
[ALA]Aw:65	[G]A2:618	3.89	[C]A2:625			82.64
[ALA]Aw:65	[G]A2:626	4.24	[A]A2:617			82.64
[ILE]Aw:66	[A]A2:617	3.15	[G]A2:626			40.28
[ILE]Aw:66	[G]A2:618	3.87	[C]A2:625			40.28
[ARG]Aw:67	[G]A2:618	2.91	[C]A2:625	base:SC,  base:SC		88.28
[ARG]Aw:67	[C]A2:619	2.94	[G]A2:624	base:SC		88.28
[ARG]Aw:67	[A]A2:620	4.05				88.28
[ARG]Aw:67	[C]A2:625	4.75	[G]A2:618			88.28
[LYS]Aw:68	[C]A2:616	4.98				75.35
[LYS]Aw:68	[A]A2:617	2.71	[G]A2:626			75.35
[LYS]Aw:68	[G]A2:618	3.11	[C]A2:625			75.35
[ILE]Aw:75	[G]A2:483	3.97	[U]A2:44			54.35
[LYS]Aw:76	[G]A2:483	3.41	[U]A2:44			74.16
[LYS]Aw:76	[C]A2:484	3.79				74.16
[PHE]Aw:84	[C]A2:619	3.44	[G]A2:624			63.51
[PRO]Aw:86	[C]A2:619	3.6	[G]A2:624			73.93
[ASN]Aw:87	[G]A2:618	3.71	[C]A2:625			58.36
[ASN]Aw:87	[C]A2:619	2.56	[G]A2:624			58.36
[ASN]Aw:87	[C]A2:634	4.88	[G]A2:611			58.36
[ASP]Aw:88	[A]A2:617	2.57	[G]A2:626	sugar:SC,  sugar:SC		51.12
[ASP]Aw:88	[G]A2:618	3.08	[C]A2:625			51.12
[ASP]Aw:88	[C]A2:619	4.86	[G]A2:624			51.12
[ASP]Aw:88	[C]A2:634	4.32	[G]A2:611			51.12
[GLY]Aw:89	[A]A2:617	4.67	[G]A2:626			57.88
[GLY]Aw:89	[G]A2:618	3.44	[C]A2:625			57.88
[LEU]Aw:101	[U]A2:28	4.45	[G]A2:647			62.97
[LEU]Aw:101	[C]A2:484	3.93				62.97
[ALA]Aw:103	[A]A2:649	3.73	[U]A2:26			71.91
[GLY]Aw:104	[A]A2:649	3.08	[U]A2:26	sugar:BB		82.38
[GLY]Aw:104	[PSU]A2:650	4.11	[A]A2:25			82.38
[PHE]Aw:105	[A]A2:649	4.18	[U]A2:26			57.97
[PHE]Aw:105	[PSU]A2:650	4.13	[A]A2:25			57.97
[GLY]Aw:106	[G]A2:20	4.74	[C]A2:4			81.86
[GLY]Aw:106	[G]A2:621	4.61	[G]A2:603			81.86
[GLY]Aw:106	[A]A2:649	3.2	[U]A2:26			81.86
[GLY]Aw:106	[PSU]A2:650	3.27	[A]A2:25			81.86
[ARG]Aw:107	[C]A2:18	3.01	[G]A2:6			64.23
[ARG]Aw:107	[A]A2:19	3.29	[U]A2:5			64.23
[ARG]Aw:107	[G]A2:621	3.27	[G]A2:603			64.23
[ARG]Aw:107	[C]A2:622	3.46	[OMG]A2:602			64.23
[ARG]Aw:107	[PSU]A2:650	3.44	[A]A2:25			64.23
[LYS]Aw:108	[PSU]A2:650	2.83	[A]A2:25			41.49
[LYS]Aw:108	[A]A2:651	3.13	[C]A2:24			41.49
[GLY]Aw:109	[PSU]A2:650	4.45	[A]A2:25			68.93
[HIS]Aw:110	[U]A2:1194	3.55	[G]A2:1167			65.86
[HIS]Aw:110	[A]A2:1195	4.81				65.86
[ALA]Aw:111	[C]A2:622	4.6	[OMG]A2:602			69.01
[ALA]Aw:111	[U]A2:1194	4.24	[G]A2:1167			69.01
[VAL]Aw:112	[G]A2:621	3.66	[G]A2:603			39.59
[VAL]Aw:112	[C]A2:622	3.73	[OMG]A2:602			39.59
[GLY]Aw:113	[A]A2:620	3.46				68.96
[GLY]Aw:113	[G]A2:621	4.64	[G]A2:603			68.96
[GLY]Aw:113	[C]A2:622	2.8	[OMG]A2:602			68.96
[ASP]Aw:114	[C]A2:619	3.21	[G]A2:624	base:SC		99.0
[ASP]Aw:114	[A]A2:620	2.92		base:BB	base/AA stacks	99.0
[ASP]Aw:114	[G]A2:624	3.36	[C]A2:619			99.0
[ASP]Aw:114	[C]A2:625	4.64	[G]A2:618			99.0
[ILE]Aw:115	[A]A2:620	3.73				70.87
[GLY]Aw:117	[U]A2:1193	4.1	[G]A2:1168			93.31
[GLY]Aw:117	[U]A2:1194	4.86	[G]A2:1167			93.31
[ARG]Aw:119	[C]A2:1192	4.82	[G]A2:1169			73.52
[ARG]Aw:119	[U]A2:1193	2.74	[G]A2:1168			73.52
[ARG]Aw:119	[U]A2:1194	4.95	[G]A2:1167			73.52
[LYS]Aw:121	[U]A2:648	2.92	[A2M]A2:27	sugar:SC		60.71
[LYS]Aw:121	[A]A2:649	3.91	[U]A2:26			60.71
[VAL]Aw:123	[U]A2:28	4.0	[G]A2:647			70.01
[LYS]Aw:124	[U]A2:28	3.72	[G]A2:647			83.71
[LYS]Aw:124	[G]A2:29	2.9	[C]A2:646			83.71
[SER]Aw:129	[G]A2:29	3.15	[C]A2:646			72.17
[SER]Aw:129	[C]A2:30	3.78	[OMG]A2:645			72.17
[LEU]Aw:131	[G]A2:29	4.07	[C]A2:646			0.0
[LEU]Aw:131	[G]A2:598	3.37	[C]A2:640			0.0
[ALA]Aw:132	[G]A2:29	4.84	[C]A2:646			63.86
[ALA]Aw:132	[C]A2:30	3.85	[OMG]A2:645			63.86
[TYR]Aw:134	[C]A2:634	3.84	[G]A2:611			5.51
[TYR]Aw:134	[A]A2:635	3.79	[PSU]A2:610			5.51
[LYS]Aw:135	[G]A2:598	3.54	[C]A2:640			45.33
[LYS]Aw:137	[C]A2:30	3.37	[OMG]A2:645			75.73
[LYS]Aw:137	[U]A2:31	3.22	[A]A2:517			75.73
[LYS]Aw:137	[U]A2:597	3.9	[A]A2:641			75.73
[LYS]Aw:138	[C]A2:30	3.37	[OMG]A2:645			58.15