Residue	Ribonucleotide	Distance	Base Pair	Hbond nuc:res	Base Stack Type	Residue conservation
[LYS]BX:39	[C]B5:1	3.31	[U]B8:4964			69.26
[LYS]BX:39	[G]B5:2	4.59	[C]B8:4963			69.26
[ARG]BX:41	[A]B8:4956	4.17	[U]B5:8			44.08
[ARG]BX:41	[G]B8:4957	3.27	[C]B5:7			44.08
[THR]BX:42	[G]B5:3814	3.83				16.54
[PRO]BX:44	[G]B5:3812	3.51				45.91
[PRO]BX:44	[A]B5:3813	3.93	[U]B5:3811			45.91
[PRO]BX:44	[G]B5:3814	3.56				45.91
[THR]BX:45	[G]B5:3812	3.11				43.01
[THR]BX:45	[A]B5:3813	2.76	[U]B5:3811			43.01
[PHE]BX:46	[A]B5:2315	3.51				66.85
[PHE]BX:46	[A]B5:2316	3.68	[U]B5:2311			66.85
[PHE]BX:46	[A]B5:3813	4.99	[U]B5:3811			66.85
[PHE]BX:46	[A]B8:4956	3.48	[U]B5:8			66.85
[PHE]BX:46	[G]B8:4957	4.81	[C]B5:7			66.85
[ARG]BX:47	[A]B5:2315	4.08				31.99
[ARG]BX:47	[A]B5:2316	3.04	[U]B5:2311			31.99
[ARG]BX:47	[G]B5:2317	3.4		sugar:SC	base/AA stacks	31.99
[ARG]BX:48	[A]B5:10	3.99	[U]B8:4954			52.3
[ARG]BX:48	[G]B5:11	3.82	[C]B8:4953			52.3
[ARG]BX:48	[A]B5:2315	3.31				52.3
[ARG]BX:48	[A]B5:2316	3.16	[U]B5:2311			52.3
[ARG]BX:48	[G]B5:2317	2.72				52.3
[ARG]BX:48	[G]B5:2318	2.74		base:SC,  base:SC		52.3
[PRO]BX:49	[A]B5:2315	3.77				64.53
[PRO]BX:49	[G]B5:2318	4.86				64.53
[PRO]BX:49	[G]B8:4955	3.26	[C]B5:9			64.53
[PRO]BX:49	[A]B8:4956	3.9	[U]B5:8			64.53
[LYS]BX:50	[G]B5:2317	3.08		sugar:SC		61.64
[LYS]BX:50	[G]B5:2318	3.18		sugar:SC		61.64
[LYS]BX:50	[G]B5:2319	3.78	[C]B5:2344			61.64
[LYS]BX:50	[U]B8:4954	4.72	[A]B5:10			61.64
[LYS]BX:50	[G]B8:4955	4.97	[C]B5:9			61.64
[THR]BX:51	[A]B5:10	4.68	[U]B8:4954			33.68
[THR]BX:51	[G]B5:11	3.54	[C]B8:4953	base:SC		33.68
[THR]BX:51	[G]B5:2318	2.73		base:SC,  base:BB,  base:BB		33.68
[THR]BX:51	[U]B8:4954	3.34	[A]B5:10			33.68
[THR]BX:51	[G]B8:4955	3.73	[C]B5:9			33.68
[LEU]BX:52	[G]B5:11	3.28	[C]B8:4953	base:BB		19.34
[LEU]BX:52	[A]B5:12	4.82	[U]B8:4952			19.34
[LEU]BX:52	[G]B5:2318	4.56				19.34
[LEU]BX:52	[C]B5:2340	3.7	[G]B5:2324			19.34
[LEU]BX:52	[C]B8:4953	3.68	[G]B5:11			19.34
[LEU]BX:52	[U]B8:4954	2.98	[A]B5:10	sugar:BB		19.34
[ARG]BX:53	[G]B5:11	3.8	[C]B8:4953	sugar:SC		52.67
[ARG]BX:53	[A]B5:12	3.54	[U]B8:4952			52.67
[ARG]BX:53	[U]B5:13	4.32				52.67
[ARG]BX:53	[G]B5:2318	3.14			base/AA stacks	52.67
[LEU]BX:54	[A]B5:12	4.0	[U]B8:4952	sugar:BB		3.71
[LEU]BX:54	[U]B5:13	4.06				3.71
[LEU]BX:54	[C]B5:14	3.45	[G]B8:4951			3.71
[LEU]BX:54	[C]B8:4953	4.12	[G]B5:11			3.71
[ARG]BX:55	[U]B5:13	4.95				19.49
[ARG]BX:55	[C]B5:14	4.02	[G]B8:4951			19.49
[ARG]BX:55	[A]B5:15	4.95	[U]B8:4950			19.49
[ARG]BX:55	[C]B8:4924	3.16	[G]B8:4942	sugar:SC		19.49
[ARG]BX:55	[C]B8:4925	3.7	[G]B8:4941			19.49
[ARG]BX:56	[U]B5:13	2.75				79.45
[ARG]BX:56	[C]B5:14	2.91	[G]B8:4951			79.45
[ARG]BX:56	[A]B5:15	3.34	[U]B8:4950			79.45
[ARG]BX:56	[C]B8:4943	3.35	[G]B8:4923			79.45
[ARG]BX:56	[U]B8:4944	2.91	[G]B8:4922			79.45
[ARG]BX:56	[A]B8:4945	4.34				79.45
[GLN]BX:57	[C]B5:14	3.98	[G]B8:4951			19.34
[GLN]BX:57	[A]B5:15	2.86	[U]B8:4950			19.34
[PRO]BX:58	[A]B5:15	3.58	[U]B8:4950			68.81
[PRO]BX:58	[G]B5:16	3.55	[C]B8:4949			68.81
[LYS]BX:59	[A]B5:15	3.43	[U]B8:4950	sugar:SC		52.15
[LYS]BX:59	[G]B5:16	2.73	[C]B8:4949			52.15
[LYS]BX:59	[C]B5:126	4.33	[G]B5:142			52.15
[LYS]BX:59	[G]B5:127	4.37	[C]B5:141			52.15
[TYR]BX:60	[G]B5:16	3.79	[C]B8:4949			24.98
[TYR]BX:60	[A]B5:17	3.07	[C]B8:4948			24.98
[ARG]BX:62	[G]B5:16	3.06	[C]B8:4949			40.01
[ARG]BX:62	[A]B5:17	4.24	[C]B8:4948			40.01
[ARG]BX:62	[C]B8:4943	4.05	[G]B8:4923			40.01
[LYS]BX:63	[G]B8:4942	4.42	[C]B8:4924			36.58
[LYS]BX:63	[C]B8:4943	3.48	[G]B8:4923			36.58
[ALA]BX:65	[G]B8:4942	4.63	[C]B8:4924			30.34
[PRO]BX:66	[G]B8:4941	3.33	[C]B8:4925			26.22
[PRO]BX:66	[G]B8:4942	3.57	[C]B8:4924			26.22
[ARG]BX:67	[C]B8:4906	4.78				3.3
[ARG]BX:67	[U]B8:4907	4.67	[A]B8:4852			3.3
[ARG]BX:67	[G]B8:4941	3.63	[C]B8:4925			3.3
[ARG]BX:67	[G]B8:4942	2.9	[C]B8:4924			3.3
[ARG]BX:68	[G]B8:4868	2.82	[C]B8:4904			17.12
[ARG]BX:68	[G]B8:4941	4.51	[C]B8:4925			17.12
[ASN]BX:69	[G]B8:4940	3.85	[C]B8:4926			21.4
[ASN]BX:69	[G]B8:4941	3.99	[C]B8:4925			21.4
[LYS]BX:70	[A]B8:4867	3.21				19.29
[LYS]BX:70	[G]B8:4868	3.48	[C]B8:4904			19.29
[LYS]BX:70	[A]B8:4905	4.18				19.29
[LYS]BX:70	[C]B8:4906	2.87				19.29
[LEU]BX:81	[G]B5:2278	3.74				54.53
[THR]BX:83	[G]B5:2277	3.56	[C]B5:2253			93.76
[THR]BX:83	[G]B5:2278	2.76				93.76
[GLU]BX:84	[C]B5:2369	3.83		base:SC		93.61
[SER]BX:85	[G]B5:2277	4.33	[C]B5:2253			90.15
[SER]BX:85	[G]B5:2278	3.62				90.15
[SER]BX:85	[C]B5:2369	4.33				90.15
[SER]BX:85	[A]B5:2370	2.68		base:SC		90.15
[ALA]BX:86	[G]B5:2278	4.65				78.05
[LYS]BX:89	[C]B5:2280	2.84		base:SC		42.38
[LYS]BX:89	[C]B5:2375	3.22	[G]B5:2366	sugar:SC		42.38
[ASN]BX:93	[C]B5:2375	3.58	[G]B5:2366			26.65
[ASN]BX:93	[C]B5:2376	3.48	[G]B5:2365			26.65
[ASP]BX:101	[A]B8:4867	4.75				51.68
[VAL]BX:102	[C]B5:2623	4.01	[G]B5:2285			30.7
[VAL]BX:102	[U]B8:4919	3.64				30.7
[LYS]BX:103	[A]B8:4867	4.64				47.07
[LYS]BX:103	[U]B8:4919	3.91				47.07
[ALA]BX:104	[C]B5:2622	4.56	[G]B5:2286			92.34
[ASN]BX:105	[G]B5:2621	3.51				87.38
[ASN]BX:105	[C]B5:2622	3.24	[G]B5:2286			87.38
[ASN]BX:105	[G]B8:4939	2.87	[C]B8:4927			87.38
[LYS]BX:106	[A]B5:2281	2.69	[U]B5:2625			99.0
[LYS]BX:106	[G]B5:2282	4.32	[U]B5:2381			99.0
[LYS]BX:106	[G]B5:2621	3.44				99.0
[LYS]BX:106	[C]B5:2622	2.8	[G]B5:2286			99.0
[HIS]BX:107	[G]B5:2619	4.44	[C]B5:2383			40.57
[HIS]BX:107	[G]B5:2620	3.14	[C]B5:2382			40.57
[HIS]BX:107	[G]B5:2621	3.47				40.57
[HIS]BX:107	[C]B8:4938	3.56	[G]B8:4928			40.57
[HIS]BX:107	[G]B8:4939	4.26	[C]B8:4927			40.57
[GLN]BX:108	[G]B8:4939	3.13	[C]B8:4927			65.88
[GLN]BX:108	[G]B8:4940	2.64	[C]B8:4926			65.88
[LYS]BX:123	[C]B5:2375	3.41	[G]B5:2366			52.49
[LYS]BX:123	[C]B5:2376	2.81	[G]B5:2365			52.49
[VAL]BX:124	[A]B5:2281	4.66	[U]B5:2625			89.82
[ASN]BX:125	[C]B5:2280	2.8		sugar:SC		81.98
[ASN]BX:125	[A]B5:2281	3.47	[U]B5:2625			81.98
[ASN]BX:125	[C]B5:2374	3.97				81.98
[ASN]BX:125	[C]B5:2375	2.61	[G]B5:2366			81.98
[THR]BX:126	[C]B5:2280	3.46				89.52
[THR]BX:126	[A]B5:2281	3.14	[U]B5:2625			89.52
[THR]BX:126	[C]B5:2622	4.15	[G]B5:2286			89.52
[THR]BX:126	[C]B5:2623	4.63	[G]B5:2285			89.52
[LEU]BX:127	[U]B5:2279	3.83	[U]B5:2251			51.43
[LEU]BX:127	[C]B5:2280	3.32				51.43
[ILE]BX:128	[U]B5:2279	4.67	[U]B5:2251			67.73
[ILE]BX:128	[C]B5:2623	3.96	[G]B5:2285			67.73
[ILE]BX:128	[G]B5:2624	3.24	[C]B5:2284			67.73
[ILE]BX:128	[U]B5:2625	4.6	[A]B5:2281			67.73
[ARG]BX:129	[G]B5:2278	4.3				60.22
[PRO]BX:130	[U]B5:2251	4.36	[U]B5:2279			49.48
[PRO]BX:130	[G]B5:2278	4.0				49.48
[PRO]BX:130	[U]B5:2279	3.14	[U]B5:2251			49.48
[ASP]BX:131	[G]B8:4854	4.87	[C]B8:4865			49.01
[GLU]BX:133	[C]B8:4855	4.26	[G]B8:4864			7.94
[LYS]BX:134	[C]B5:2622	4.37	[G]B5:2286			95.9
[LYS]BX:134	[C]B5:2623	2.56	[G]B5:2285			95.9
[LYS]BX:135	[G]B5:2278	4.12				86.12
[LYS]BX:135	[U]B5:2279	2.86	[U]B5:2251			86.12
[TYR]BX:137	[G]B5:2278	4.45				64.22
[TYR]BX:137	[U]B5:2279	2.7	[U]B5:2251			64.22
[TYR]BX:137	[C]B5:2280	3.25			base/AA stacks	64.22
[ARG]BX:139	[C]B5:2376	2.7	[G]B5:2365			65.72
[ARG]BX:139	[C]B5:2377	3.03	[G]B5:2364			65.72