Residue	Ribonucleotide	Distance	Base Pair	Hbond nuc:res	Base Stack Type	Residue conservation
[THR]B:11	[A]V:70	4.58				95.54
[TYR]B:13	[G]V:68	3.3				84.86
[TYR]B:13	[C]V:69	3.35			base/AA stacks	84.86
[ASN]B:15	[U]V:67	3.72				69.01
[ASN]B:15	[G]V:68	2.93		base:SC		69.01
[ASN]B:16	[U]V:67	2.67		base:SC		98.92
[ASN]B:16	[G]V:68	2.83		base:BB		98.92
[LEU]B:17	[G]V:68	4.13				84.68
[GLU]B:19	[A]V:65	4.52				54.19
[GLU]B:19	[U]V:66	3.09		base:SC		54.19
[GLU]B:19	[U]V:67	4.77				54.19
[GLU]B:19	[G]V:68	2.7		base:SC		54.19
[LYS]B:22	[GTP]V:59	3.32	[C]V:80			55.04
[LYS]B:22	[G]V:60	3.65	[C]V:79			55.04
[LYS]B:23	[GTP]V:59	3.39	[C]V:80			13.55
[ASP]B:24	[GTP]V:59	4.49	[C]V:80			17.95
[LEU]B:44	[A]V:70	3.69				58.08
[LEU]B:44	[C]V:71	4.3				58.08
[SER]B:46	[C]V:73	4.92				16.25
[SER]B:46	[C]V:74	3.07				16.25
[ARG]B:47	[GTP]V:59	2.77	[C]V:80			55.93
[ARG]B:47	[C]V:74	4.35				55.93
[ARG]B:47	[G]V:75	4.83	[C]V:64			55.93
[SER]B:48	[C]V:74	3.84				64.45
[SER]B:48	[G]V:75	3.51	[C]V:64			64.45
[LEU]B:49	[A]V:65	3.74				6.48
[LEU]B:49	[U]V:66	4.5				6.48
[LEU]B:49	[G]V:68	4.81				6.48
[LEU]B:49	[G]V:75	3.17	[C]V:64			6.48
[LYS]B:50	[G]V:68	2.9		sugar:BB		59.03
[LYS]B:50	[A]V:70	3.83				59.03
[LYS]B:50	[C]V:71	4.59				59.03
[MET]B:51	[G]V:68	4.9				76.21
[MET]B:51	[C]V:69	4.26				76.21
[MET]B:51	[A]V:70	3.52				76.21
[ARG]B:52	[A]V:65	2.98		base:SC		88.8
[ARG]B:52	[U]V:66	3.59				88.8
[ARG]B:52	[G]V:68	3.24				88.8
[ARG]B:52	[G]V:75	3.06	[C]V:64	base:SC,  base:SC		88.8
[GLY]B:53	[G]V:68	3.48				97.65
[GLN]B:54	[G]V:68	3.1			base/AA stacks	97.55
[GLN]B:54	[C]V:69	3.65				97.55
[PHE]B:56	[C]V:69	3.56				73.28
[PHE]B:56	[A]V:70	3.35			base/AA stacks	73.28
[LYS]B:80	[U]V:67	2.82		base:SC		86.18
[GLN]B:85	[C]V:69	3.66				39.98
[TYR]B:86	[C]V:69	3.02		base:BB		67.32
[ALA]B:87	[C]V:69	3.55				90.25
[ALA]B:87	[A]V:70	4.12				90.25
[LYS]B:88	[C]V:69	3.14		base:BB, sugar:SC		64.74
[THR]B:89	[C]V:69	4.55				48.02
[THR]B:89	[A]V:70	2.91		base:SC,  base:BB		48.02
[THR]B:89	[C]V:71	3.66				48.02
[ASP]B:90	[A]V:70	3.62				44.29
[ASP]B:90	[C]V:71	3.21		base:BB		44.29
[SER]B:91	[A]V:70	2.87		base:SC,  base:SC		91.37
[SER]B:91	[C]V:71	3.65				91.37
[ASP]B:92	[C]V:71	3.06		base:BB,  base:BB	base/AA stacks	57.54
[ASP]B:92	[U]V:72	4.41				57.54
[GLU]B:129	[A]V:84	4.97	[U]V:110			3.51
[MET]B:132	[G]V:85	3.59	[U]V:109			36.49
[MET]B:132	[A]V:86	4.13	[U]V:108			36.49
[ARG]B:136	[A]V:86	2.81	[U]V:108			39.72
[ARG]B:136	[G]V:102	4.1				39.72
[ARG]B:136	[G]V:103	3.04	[U]V:92			39.72
[LYS]B:139	[U]V:87	4.33	[U]V:107			50.83
[LYS]B:139	[A]V:101	4.01				50.83
[LYS]B:139	[G]V:102	2.76				50.83
[ARG]B:143	[A]V:100	2.79		base:SC,  base:SC		26.09
[ARG]B:143	[A]V:101	3.28				26.09
[VAL]B:147	[A]V:100	3.95				4.35
[TRP]B:154	[C]V:96	4.04				11.98
[TRP]B:154	[A]V:97	2.78				11.98
[PRO]B:156	[A]V:97	4.34				56.18
[ASP]B:159	[A]V:97	2.42		sugar:SC		13.96
[ASP]B:159	[C]V:98	4.87				13.96
[ASN]B:161	[A]V:97	3.14		sugar:SC		19.66
[ASN]B:161	[C]V:98	3.47				19.66
[ALA]B:162	[A]V:97	3.53				36.45
[GLN]B:163	[A]V:97	4.69				10.04
[THR]B:169	[A]V:97	4.98				85.47
[PHE]B:171	[U]V:95	3.4				81.96
[PHE]B:171	[C]V:96	3.3			base/AA stacks	81.96
[ALA]B:173	[U]V:95	3.56				44.11
[ARG]B:174	[G]V:93	3.78				75.43
[ARG]B:174	[A]V:94	4.88				75.43
[ARG]B:174	[U]V:95	2.58				75.43
[VAL]B:175	[G]V:93	2.72		base:BB,  base:BB		76.45
[ASN]B:176	[G]V:93	3.46				73.38
[TYR]B:177	[G]V:93	2.88		base:BB	base/AA stacks	13.58
[TYR]B:177	[A]V:94	4.1				13.58
[ASP]B:178	[G]V:93	4.84				29.92
[ARG]B:196	[A]V:97	4.45				52.76
[HIS]B:198	[A]V:97	3.33				72.92
[VAL]B:200	[A]V:97	3.93				76.06
[VAL]B:200	[C]V:98	3.55				76.06
[TYR]B:201	[C]V:98	3.39				47.98
[SER]B:202	[C]V:98	3.5				82.29
[LYS]B:203	[C]V:98	2.9		sugar:BB		57.56
[ARG]B:204	[C]V:98	3.12		base:SC		27.21
[ARG]B:204	[G]V:99	3.72			base/AA stacks	27.21
[ARG]B:209	[G]V:93	4.81				55.45
[ARG]B:209	[A]V:94	4.82				55.45
[ARG]B:209	[C]V:98	3.4				55.45
[ARG]B:209	[G]V:99	3.23				55.45
[ARG]B:209	[A]V:100	3.56				55.45
[GLY]B:210	[G]V:93	3.89				70.41
[TYR]B:211	[C]V:96	3.61				71.4
[TYR]B:211	[A]V:97	3.58				71.4
[TYR]B:211	[C]V:98	3.84				71.4
[TYR]B:211	[G]V:99	2.33				71.4
[PHE]B:213	[C]V:96	3.46				98.08
[PHE]B:213	[A]V:97	3.3			base/AA stacks	98.08
[ARG]B:237	[G]V:93	3.46		sugar:SC	base/AA stacks	56.35
[LEU]B:240	[U]V:95	3.39				11.06
[ASP]B:242	[U]V:95	2.8		base:SC		72.06
[ASP]B:242	[C]V:96	3.7				72.06
[VAL]B:243	[C]V:96	2.9		base:BB		23.5
[GLU]B:244	[C]V:96	3.5				79.77
[GLU]B:244	[A]V:97	3.1		base:SC,  base:SC		79.77
[ARG]B:245	[U]V:95	4.97				64.32
[ARG]B:245	[C]V:96	2.99		base:BB		64.32
[GLY]B:246	[C]V:96	3.07		base:BB		48.67
[ARG]B:247	[A]V:97	3.77				68.08
[TRP]B:252	[U]V:95	3.73				41.11
[TRP]B:252	[C]V:96	2.89		sugar:SC	base/AA stacks	41.11
[PRO]B:254	[C]V:96	3.78				78.09
[PRO]B:254	[A]V:97	3.56				78.09
[ARG]B:255	[A]V:94	3.66			base/AA stacks	73.2
[ARG]B:255	[C]V:96	3.16				73.2
[ARG]B:255	[A]V:100	3.06				73.2
[ARG]B:256	[A]V:97	3.45				80.41
[ARG]B:256	[G]V:99	3.11			base/AA stacks	80.41
[ARG]B:256	[A]V:100	3.41				80.41
[GLY]B:258	[A]V:100	3.62				77.71
[GLY]B:260	[U]V:95	3.75				73.77
[GLY]B:260	[C]V:96	3.88				73.77
[LEU]B:261	[A]V:94	4.48				11.7
[LEU]B:261	[U]V:95	3.16		sugar:BB		11.7
[LEU]B:261	[C]V:96	4.7				11.7
[GLY]B:262	[U]V:95	3.65				72.88
[GLY]B:263	[U]V:95	4.56				64.54
[THR]B:264	[U]V:92	4.14	[G]V:103			32.91
[THR]B:264	[G]V:93	2.61				32.91
[THR]B:264	[A]V:94	3.38		sugar:SC		32.91
[THR]B:264	[U]V:95	4.78				32.91
[THR]B:264	[G]V:103	4.69	[U]V:92			32.91
[ARG]B:265	[U]V:92	3.15	[G]V:103		base/AA stacks	52.42
[ARG]B:265	[G]V:93	2.73				52.42
[ARG]B:265	[A]V:94	3.28			base/AA stacks	52.42
[ARG]B:265	[G]V:102	3.0		base:BB,  base:BB		52.42
[ARG]B:265	[G]V:103	3.63	[U]V:92			52.42
[ARG]B:266	[G]V:102	3.42				32.67
[ARG]B:266	[G]V:103	4.52	[U]V:92			32.67
[GLY]B:267	[G]V:102	4.73				78.48
[GLY]B:267	[G]V:103	3.68	[U]V:92			78.48
[GLY]B:267	[U]V:104	3.4	[A]V:91			78.48