Residue Ribonucleotide Distance Base Pair Hbond nuc:res Base Stack Type Residue conservation [PRO]1s:2 [G]1a:1312 3.08 [C]1a:1325 46.65 [PRO]1s:2 [U]1a:1313 2.73 [A]1a:1324 base:BB, base:BB 46.65 [PRO]1s:2 [C]1a:1314 3.24 [G]1a:1323 46.65 [PRO]1s:2 [G]1a:1323 4.42 [C]1a:1314 46.65 [PRO]1s:2 [A]1a:1324 4.33 [U]1a:1313 46.65 [ARG]1s:3 [U]1a:1313 4.18 [A]1a:1324 95.04 [ARG]1s:3 [C]1a:1314 4.04 [G]1a:1323 95.04 [ARG]1s:3 [U]1a:1315 4.9 [A]1a:1319 95.04 [ARG]1s:3 [G]1a:1316 3.75 base:SC 95.04 [ARG]1s:3 [C]1a:1317 4.96 95.04 [ARG]1s:3 [A]1a:1318 2.81 95.04 [ARG]1s:3 [A]1a:1319 3.4 [U]1a:1315 95.04 [SER]1s:4 [U]1a:1313 3.7 [A]1a:1324 81.6 [SER]1s:4 [C]1a:1314 2.83 [G]1a:1323 81.6 [SER]1s:4 [U]1a:1315 4.83 [A]1a:1319 81.6 [SER]1s:4 [G]1a:1316 4.84 81.6 [LEU]1s:5 [G]1a:1312 4.06 [C]1a:1325 35.02 [LEU]1s:5 [U]1a:1313 2.81 [A]1a:1324 35.02 [LEU]1s:5 [C]1a:1314 4.86 [G]1a:1323 35.02 [LYS]1s:6 [G]1a:1271 4.48 [C]1a:1264 40.67 [LYS]1s:6 [G]1a:1272 4.88 [C]1a:1263 40.67 [LYS]1s:6 [U]1a:1313 3.95 [A]1a:1324 40.67 [LYS]1s:6 [C]1a:1314 3.2 [G]1a:1323 40.67 [LYS]1s:6 [U]1a:1315 4.92 [A]1a:1319 40.67 [LYS]1s:7 [G]1a:1316 3.15 base:SC 91.82 [LYS]1s:7 [C]1a:1317 4.68 91.82 [LYS]1s:7 [A]1a:1318 2.97 91.82 [PHE]1s:10 [C]1a:1317 3.72 43.63 [PHE]1s:10 [A]1a:1318 3.32 43.63 [PHE]1s:10 [A]1a:1319 4.36 [U]1a:1315 43.63 [HIS]1s:14 [A]1a:1014 3.33 41.69 [HIS]1s:14 [A]1a:1015 4.39 41.69 [LYS]1s:18 [A]1a:1014 3.09 50.2 [LYS]1s:32 [A]1a:1014 4.45 58.19 [TRP]1s:34 [G]1a:987 4.83 [C]1a:1218 54.97 [TRP]1s:34 [A]1a:1014 3.13 base/AA stacks 54.97 [TRP]1s:34 [U]1a:1219 3.42 [A]1a:986 54.97 [TRP]1s:34 [G]1a:1220 3.49 [C]1a:985 54.97 [ARG]1s:36 [G]1a:1220 3.15 [C]1a:985 98.91 [ARG]1s:36 [G]1a:1221 3.69 [C]1a:984 98.91 [ARG]1s:36 [C]1a:1320 2.89 base:SC, base:SC 98.91 [ARG]1s:36 [C]1a:1321 3.86 98.91 [ARG]1s:37 [G]1a:1220 4.27 [C]1a:985 71.57 [ARG]1s:37 [C]1a:1317 2.71 base:SC, base:SC, base:SC 71.57 [ARG]1s:37 [A]1a:1318 3.12 71.57 [ARG]1s:37 [C]1a:1320 4.19 71.57 [TYR]1s:52 [A]1a:986 2.4 [U]1a:1219 base:SC 79.71 [TYR]1s:52 [G]1a:987 3.33 [C]1a:1218 sugar:SC 79.71 [TYR]1s:52 [G]1a:1220 3.48 [C]1a:985 79.71 [ASN]1s:53 [A]1a:958 3.33 base:BB 88.54 [ASN]1s:53 [G]1a:1220 4.06 [C]1a:985 88.54 [ASN]1s:53 [G]1a:1221 3.24 [C]1a:984 sugar:BB 88.54 [GLY]1s:54 [A]1a:958 3.19 97.8 [GLY]1s:54 [C]1a:985 4.45 [G]1a:1220 97.8 [GLY]1s:54 [A]1a:986 3.12 [U]1a:1219 97.8 [GLY]1s:54 [G]1a:1220 2.66 [C]1a:985 base:BB 97.8 [GLY]1s:54 [G]1a:1221 3.37 [C]1a:984 97.8 [LYS]1s:55 [A]1a:958 3.33 sugar:SC 73.86 [LYS]1s:55 [A]1a:986 3.13 [U]1a:1219 sugar:BB 73.86 [LYS]1s:55 [G]1a:987 4.92 [C]1a:1218 73.86 [LYS]1s:55 [G]1a:1220 4.7 [C]1a:985 73.86 [LYS]1s:70 [A]1a:1318 4.62 83.27 [LYS]1s:70 [A]1a:1319 3.28 [U]1a:1315 83.27 [LYS]1s:70 [C]1a:1320 3.16 83.27 [GLY]1s:72 [C]1a:1320 3.15 93.27 [GLU]1s:73 [C]1a:1320 3.24 91.96 [THR]1s:77 [A]1a:958 3.24 base:BB 99.0 [THR]1s:77 [A]1a:959 2.83 base:BB 99.0 [THR]1s:77 [G]1a:1221 3.11 [C]1a:984 99.0 [THR]1s:77 [G]1a:1222 2.64 [U]1a:982 99.0 [THR]1s:77 [C]1a:1321 3.39 sugar:SC 99.0 [ARG]1s:78 [A]1a:959 4.08 87.03 [ARG]1s:78 [U]1a:960 3.91 [U]1a:956 87.03 [ARG]1s:78 [G]1a:1222 3.61 [U]1a:982 87.03 [ARG]1s:78 [C]1a:1223 3.04 87.03 [ARG]1s:78 [G]1a:1224 3.19 87.03 [ARG]1s:78 [A]1a:1225 3.06 [U]1a:955 87.03 [ARG]1s:78 [C]1a:1321 2.91 sugar:SC 87.03 [ARG]1s:78 [C]1a:1322 2.65 87.03 [THR]1s:79 [U]1a:956 4.01 [U]1a:960 69.78 [THR]1s:79 [U]1a:957 3.17 69.78 [THR]1s:79 [A]1a:958 3.89 69.78 [THR]1s:79 [A]1a:959 4.87 69.78 [THR]1s:79 [U]1a:960 4.36 [U]1a:956 69.78 [TYR]1s:80 [U]1a:956 3.69 [U]1a:960 3.13 [TYR]1s:80 [A]1a:1225 4.94 [U]1a:955 3.13 [TYR]1s:80 [C]1a:1226 3.31 [G]1a:954 3.13 [TYR]1s:80 [A]1a:1227 2.38 3.13 [ARG]1s:81 [U]1a:957 4.27 47.57 [GLY]1s:82 [U]1a:956 4.29 [U]1a:960 21.0 [HIS]1s:83 [G]1a:954 3.76 [C]1a:1226 77.86 [HIS]1s:83 [U]1a:955 2.71 [A]1a:1225 base:SC 77.86 [HIS]1s:83 [U]1a:956 3.88 [U]1a:960 77.86 [HIS]1s:83 [C]1a:1226 2.89 [G]1a:954 77.86 [HIS]1s:83 [A]1a:1227 3.3 base/AA stacks 77.86 [GLY]1s:84 [U]1a:955 4.81 [A]1a:1225 53.92 [GLY]1s:84 [A]1a:1227 4.44 53.92