Residue Ribonucleotide Distance Base Pair Hbond nuc:res Base Stack Type Residue conservation [ARG]Ao:18 [G]A2:1612 4.33 [C]A2:1629 74.14 [ARG]Ao:18 [G]A2:1613 2.66 [C]A2:1628 74.14 [GLN]Ao:35 [G]A2:1614 4.84 [C]A2:1627 51.63 [TYR]Ao:37 [G]A2:1614 3.6 [C]A2:1627 38.39 [SER]Ao:38 [G]A2:1613 3.84 [C]A2:1628 59.95 [SER]Ao:38 [G]A2:1614 3.22 [C]A2:1627 59.95 [ALA]Ao:39 [G]A2:1614 2.83 [C]A2:1627 85.84 [ALA]Ao:39 [A]A2:1615 3.41 [PSU]A2:1626 85.84 [ARG]Ao:40 [A]A2:1615 4.37 [PSU]A2:1626 82.78 [ARG]Ao:40 [U]A2:1616 2.9 [U]A2:1625 base:SC 82.78 [ARG]Ao:40 [U]A2:1617 2.63 [A]A2:1621 base:SC 82.78 [ARG]Ao:40 [G]A2:1618 2.77 base:SC 82.78 [ARG]Ao:40 [A]A2:1621 2.9 [U]A2:1617 sugar:SC 82.78 [ARG]Ao:40 [U]A2:1622 3.24 82.78 [ARG]Ao:40 [U]A2:1625 3.49 [U]A2:1616 base:SC 82.78 [ARG]Ao:40 [PSU]A2:1626 4.98 [A]A2:1615 82.78 [GLN]Ao:41 [U]A2:1622 4.69 11.12 [ARG]Ao:42 [G]A2:1614 2.92 [C]A2:1627 91.47 [ARG]Ao:42 [A]A2:1615 3.08 [PSU]A2:1626 91.47 [ARG]Ao:43 [U]A2:1616 3.24 [U]A2:1625 base/AA stacks 97.28 [ARG]Ao:43 [U]A2:1617 3.12 [A]A2:1621 base/AA stacks 97.28 [ARG]Ao:43 [G]A2:1618 2.7 base:SC, base:SC 97.28 [ARG]Ao:44 [A]A2:1620 3.07 68.8 [ARG]Ao:44 [A]A2:1621 2.99 [U]A2:1617 68.8 [ARG]Ao:47 [G]A2:1618 3.31 base/AA stacks 93.72 [ARG]Ao:47 [C]A2:1619 3.38 93.72 [ARG]Ao:47 [A]A2:1620 2.7 93.72 [ARG]Ao:50 [C]A2:1619 3.35 56.22 [ARG]Ao:51 [U]A2:1301 3.16 sugar:SC base/AA stacks 7.63 [LYS]Ao:52 [G]A2:1299 3.71 48.05 [LYS]Ao:52 [A]A2:1300 4.37 48.05 [LYS]Ao:52 [G]A2:1515 3.83 [C]A2:1269 48.05 [SER]Ao:55 [A]A2:1300 4.59 44.15 [SER]Ao:55 [U]A2:1301 3.84 44.15 [LYS]Ao:58 [U]A2:1301 4.9 51.43 [ARG]Ao:59 [U]A2:1297 4.67 [C]A2:1304 59.65 [ARG]Ao:59 [U]A2:1298 3.72 [A]A2:1302 base:SC 59.65 [ARG]Ao:59 [A]A2:1300 3.55 59.65 [LYS]Ao:62 [A]A2:1296 3.19 [U]A2:1305 37.68 [LYS]Ao:77 [G]A2:1299 3.29 71.32 [LYS]Ao:77 [A]A2:1300 4.84 71.32 [THR]Ao:78 [G]A2:1299 3.56 86.9 [HIS]Ao:79 [G]A2:1299 3.24 base/AA stacks 66.48 [HIS]Ao:79 [G]A2:1515 3.05 [C]A2:1269 sugar:SC 66.48 [HIS]Ao:79 [G]A2:1516 3.5 [C]A2:1268 66.48 [ARG]Ao:81 [G]A2:1516 3.29 [C]A2:1268 96.42 [ARG]Ao:81 [G]A2:1517 3.42 [C]A2:1267 96.42 [ARG]Ao:81 [U]A2:1622 3.37 96.42 [ARG]Ao:81 [U]A2:1623 3.89 96.42 [ASP]Ao:82 [A]A2:1620 2.8 sugar:SC 58.52 [ASP]Ao:82 [A]A2:1621 4.97 [U]A2:1617 58.52 [ASP]Ao:82 [U]A2:1622 3.15 58.52 [TYR]Ao:97 [C]A2:1269 2.57 [G]A2:1515 base:SC 77.44 [TYR]Ao:97 [G]A2:1270 4.65 [C]A2:1514 77.44 [TYR]Ao:97 [G]A2:1515 3.62 [C]A2:1269 77.44 [TYR]Ao:97 [G]A2:1516 3.55 [C]A2:1268 77.44 [ASN]Ao:98 [A]A2:1241 3.5 base:BB 86.72 [ASN]Ao:98 [G]A2:1516 3.96 [C]A2:1268 86.72 [ASN]Ao:98 [G]A2:1517 3.5 [C]A2:1267 86.72 [GLY]Ao:99 [A]A2:1241 3.27 99.0 [GLY]Ao:99 [C]A2:1268 4.63 [G]A2:1516 99.0 [GLY]Ao:99 [C]A2:1269 3.32 [G]A2:1515 99.0 [GLY]Ao:99 [G]A2:1516 3.16 [C]A2:1268 base:BB 99.0 [GLY]Ao:99 [G]A2:1517 3.5 [C]A2:1267 99.0 [LYS]Ao:100 [A]A2:1241 3.06 sugar:SC 67.14 [LYS]Ao:100 [C]A2:1269 3.19 [G]A2:1515 sugar:BB 67.14 [PHE]Ao:102 [G]A2:1299 3.64 76.87 [TYR]Ao:115 [A]A2:1620 4.93 80.37 [TYR]Ao:115 [A]A2:1621 2.88 [U]A2:1617 80.37 [TYR]Ao:115 [U]A2:1622 3.09 base/AA stacks 80.37 [GLY]Ao:117 [U]A2:1622 3.36 92.41 [GLY]Ao:117 [U]A2:1623 4.31 92.41 [GLU]Ao:118 [U]A2:1622 3.15 93.37 [SER]Ao:120 [U]A2:1623 3.74 75.04 [ILE]Ao:121 [U]A2:1623 3.33 30.77 [THR]Ao:122 [A]A2:1241 2.97 base:BB 94.63 [THR]Ao:122 [A]A2:1242 3.04 [U]A2:1240 base:BB 94.63 [THR]Ao:122 [G]A2:1517 3.14 [C]A2:1267 94.63 [THR]Ao:122 [G]A2:1518 2.82 [A]A2:1266 94.63 [THR]Ao:122 [U]A2:1623 3.0 base:SC, base:BB 94.63 [TYR]Ao:123 [A]A2:1242 3.93 [U]A2:1240 82.47 [TYR]Ao:123 [U]A2:1243 4.38 [PSU]A2:1239 82.47 [TYR]Ao:123 [G]A2:1521 3.29 [C]A2:1238 82.47 [TYR]Ao:123 [U]A2:1623 3.4 82.47 [LYS]Ao:124 [PSU]A2:1239 4.65 [U]A2:1243 74.75 [LYS]Ao:124 [U]A2:1240 3.65 [A]A2:1242 74.75 [LYS]Ao:124 [A]A2:1241 4.82 74.75 [LYS]Ao:124 [U]A2:1243 4.43 [PSU]A2:1239 74.75 [LYS]Ao:124 [G]A2:1521 4.92 [C]A2:1238 74.75 [PRO]Ao:125 [PSU]A2:1239 4.49 [U]A2:1243 0.91 [VAL]Ao:126 [C]A2:1238 4.84 [G]A2:1521 54.51 [VAL]Ao:126 [PSU]A2:1239 3.83 [U]A2:1243 54.51 [VAL]Ao:126 [U]A2:1243 4.81 [PSU]A2:1239 54.51 [VAL]Ao:126 [G]A2:1521 3.5 [C]A2:1238 54.51 [VAL]Ao:126 [C]A2:1522 3.4 [G]A2:1237 54.51 [VAL]Ao:126 [A]A2:1523 4.87 54.51 [LYS]Ao:127 [C]A2:1238 4.71 [G]A2:1521 17.78 [LYS]Ao:127 [PSU]A2:1239 3.37 [U]A2:1243 17.78 [HIS]Ao:128 [G]A2:1237 3.86 [C]A2:1522 82.87 [HIS]Ao:128 [C]A2:1238 2.99 [G]A2:1521 sugar:SC 82.87 [HIS]Ao:128 [PSU]A2:1239 4.58 [U]A2:1243 82.87 [HIS]Ao:128 [G]A2:1521 4.23 [C]A2:1238 82.87 [HIS]Ao:128 [C]A2:1522 3.1 [G]A2:1237 82.87 [HIS]Ao:128 [A]A2:1523 3.32 base/AA stacks 82.87 [GLY]Ao:129 [C]A2:1238 3.13 [G]A2:1521 sugar:BB 69.1 [GLY]Ao:129 [PSU]A2:1239 4.11 [U]A2:1243 69.1 [GLY]Ao:129 [A]A2:1523 3.19 base:BB 69.1 [ARG]Ao:130 [C]A2:1238 3.37 [G]A2:1521 49.4 [ARG]Ao:130 [A]A2:1523 4.6 49.4 [PRO]Ao:131 [G]A2:1237 3.54 [C]A2:1522 73.14 [PRO]Ao:131 [C]A2:1238 3.96 [G]A2:1521 73.14 [PRO]Ao:131 [A]A2:1523 3.56 73.14 [GLY]Ao:132 [G]A2:1237 3.2 [C]A2:1522 sugar:BB 96.25 [GLY]Ao:132 [C]A2:1238 3.47 [G]A2:1521 96.25 [ILE]Ao:133 [G]A2:1236 4.71 [C]A2:1524 73.02 [ILE]Ao:133 [G]A2:1237 3.36 [C]A2:1522 73.02 [GLY]Ao:134 [G]A2:1236 2.49 [C]A2:1524 89.5 [GLY]Ao:134 [G]A2:1237 4.34 [C]A2:1522 89.5 [ALA]Ao:135 [G]A2:1236 3.05 [C]A2:1524 base:BB 95.69 [ALA]Ao:135 [G]A2:1237 3.3 [C]A2:1522 95.69 [ALA]Ao:135 [C]A2:1524 4.26 [G]A2:1236 95.69 [ALA]Ao:135 [G]A2:1525 3.35 [C]A2:1235 95.69 [THR]Ao:136 [G]A2:1525 3.92 [C]A2:1235 87.03 [HIS]Ao:137 [G]A2:1525 3.29 [C]A2:1235 79.86 [HIS]Ao:137 [C]A2:1526 3.54 [G]A2:1234 79.86 [SER]Ao:138 [A]A2:1252 3.97 85.84 [SER]Ao:138 [G]A2:1525 4.64 [C]A2:1235 85.84 [SER]Ao:138 [C]A2:1526 3.06 [G]A2:1234 sugar:SC 85.84 [SER]Ao:138 [G]A2:1527 4.79 [PSU]A2:1233 85.84