Residue	Ribonucleotide	Distance	Base Pair	Hbond nuc:res	Base Stack Type	Residue conservation
[GLN]A:222	[A]B:10	2.82		sugar:SC		97.01
[CYS]A:225	[A]B:10	4.42				95.84
[ARG]A:226	[A]B:10	3.06		sugar:SC	base/AA stacks	96.95
[GLN]A:229	[A]B:10	2.82		base:SC,  base:SC		98.29
[PRO]A:260	[U]B:9	3.82				85.06
[PRO]A:260	[A]B:10	4.75				85.06
[PHE]A:261	[A]B:10	3.66				90.13
[ASN]A:263	[U]B:9	2.73		base:SC,  base:SC		97.58
[TYR]A:264	[U]B:9	3.08			base/AA stacks	96.3
[TYR]A:264	[A]B:10	3.32			base/AA stacks	96.3
[GLN]A:267	[U]B:9	2.82		base:SC		97.69
[TYR]A:297	[U]B:9	3.11				94.11
[THR]A:299	[U]B:7	3.88				97.83
[ARG]A:300	[U]B:7	3.26		sugar:SC	base/AA stacks	98.26
[ARG]A:300	[U]B:9	2.97			base/AA stacks	98.26
[GLN]A:303	[U]B:7	2.92		base:SC		98.97
[LEU]A:339	[U]B:6	3.54				66.55
[LEU]A:339	[U]B:7	3.69				66.55
[ASN]A:340	[U]B:7	4.59				94.62
[ASN]A:342	[U]B:6	2.76		base:SC,  base:SC		96.38
[HIS]A:343	[U]B:6	3.12			base/AA stacks	98.83
[HIS]A:343	[U]B:7	3.33			base/AA stacks	98.83
[GLN]A:346	[U]B:6	2.94		base:SC		97.72
[LYS]A:377	[A]B:4	3.96				80.81
[HIS]A:378	[U]B:6	3.58		sugar:SC	base/AA stacks	91.29
[CYS]A:380	[A]B:4	3.69				98.69
[CYS]A:381	[A]B:4	4.18				96.75
[CYS]A:381	[U]B:5	3.59				96.75
[CYS]A:381	[U]B:6	3.75				96.75
[GLN]A:384	[A]B:4	2.94		base:SC		97.72
[GLN]A:384	[U]B:5	4.87				97.72
[LYS]A:385	[U]B:6	4.94				91.35
[GLN]A:413	[U]B:3	3.5				82.87
[GLN]A:413	[A]B:4	4.73				82.87
[PHE]A:414	[A]B:4	3.54				75.07
[ASN]A:416	[U]B:3	2.78		base:SC,  base:SC		99.0
[TYR]A:417	[U]B:3	2.95			base/AA stacks	97.24
[TYR]A:417	[A]B:4	3.2			base/AA stacks	97.24
[GLN]A:420	[U]B:3	2.85		base:SC		98.97
[LYS]A:451	[G]B:2	3.11		sugar:SC		98.91
[LYS]A:451	[U]B:3	3.44				98.91
[PHE]A:452	[U]B:3	3.13				84.89
[SER]A:454	[G]B:2	2.93		base:SC		98.97
[ASN]A:455	[G]B:2	3.28				98.18
[ASN]A:455	[U]B:3	3.33			base/AA stacks	98.18
[GLU]A:458	[G]B:2	2.57		base:SC,  base:SC		98.94
[ASN]A:516	[U]B:1	3.45				63.91
[ASN]A:516	[G]B:2	4.86				63.91
[PHE]A:517	[G]B:2	3.44				66.63
[ASN]A:519	[U]B:1	2.8		base:SC,  base:SC		99.0
[TYR]A:520	[U]B:1	3.0			base/AA stacks	93.54
[TYR]A:520	[G]B:2	3.33			base/AA stacks	93.54
[GLN]A:523	[U]B:1	2.88		base:SC		98.32
[SER]A:583	[U]B:1	3.12		sugar:SC		72.44
[TYR]A:584	[U]B:1	3.39			base/AA stacks	69.34
[LYS]A:587	[U]B:1	2.86		base:SC		89.13