Run the DENSE pipeline
Note: Due to resource limitations, the interactive web server does not currently execute the
phylostratygraphy step of DENSE. Instead, users must provide their own TRG list, which consists in a
simple file containing CDS IDs (which can be found in the genome GFF3 file). For the model organisms
included in DeNovoDB, users can readily select and download this list, including the option to modify
the phylostratum threshold used to define TRGs. Also, please note that this web server is limited to a
total upload of 1Gb. If your files are large, we recommend you to use DENSE through command line instead.
Submission form
Fill in the form below to submit a job with DENSE. Fields marked with a star (*) are mandatory.