MSA-tools


/!\ Please note that services will be unavailable for 3 days (17/11/2025 to 19/11/2025) for technical reasons. Sorry for the inconvenience.


Format conversion

Convert your Multiple (protein) Sequence Alignment file (a3m <-> fasta)


This tool uses the reformat.pl script from Soeding's lab's hh-suite software package to convert a3m formatted protein MSA files to fasta format and vice versa. Please just upload your file in the field below.

Example output: DHS-ERK2 complex; see Help pages for more information.


Reset fields

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