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All interfaces > All interologs > Interface groups > group1 > 1F7U_A_B

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

1F7U_A
1F7U_B
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:36 [ARG] B:916 [H2U] 4.94 52.5
A:58 [LEU] B:916 [H2U] 3.9 57.56
A:59 [GLU] B:916 [H2U] 3.21 40.68
A:59 [GLU] B:918 [G] 2.52 B:956 [C] sugar:SC 40.68
A:60 [TRP] B:916 [H2U] 3.09 base:BB base/AA stacks 0.0
A:62 [ASN] B:916 [H2U] 4.54 42.33
A:62 [ASN] B:919 [H2U] 3.52 42.33
A:62 [ASN] B:922 [C] 4.58 B:913 [C] 42.33
A:63 [THR] B:922 [C] 3.53 B:913 [C] 10.1
A:66 [ARG] B:919 [H2U] 3.16 base/AA stacks 4.09
A:66 [ARG] B:921 [A] 4.16 4.09
A:70 [LEU] B:918 [G] 4.14 B:956 [C] 67.22
A:70 [LEU] B:919 [H2U] 3.71 67.22
A:72 [PRO] B:918 [G] 3.61 B:956 [C] 65.51
A:74 [PRO] B:918 [G] 3.69 B:956 [C] 59.5
A:74 [PRO] B:956 [C] 3.53 B:918 [G] 59.5
A:75 [ARG] B:918 [G] 3.5 B:956 [C] 6.01
A:77 [ARG] B:956 [C] 3.18 B:918 [G] base/AA stacks 63.03
A:106 [ASN] B:919 [H2U] 2.74 base:SC 60.32
A:107 [GLY] B:919 [H2U] 4.4 66.13
A:108 [PRO] B:919 [H2U] 4.41 59.2
A:109 [PHE] B:918 [G] 3.42 B:956 [C] 62.99
A:109 [PHE] B:919 [H2U] 3.33 base/AA stacks 62.99
A:111 [GLN] B:919 [H2U] 2.75 base:SC 88.26
A:153 [ASN] B:976 [A] 2.84 sugar:SC, sugar:SC 99.0
A:190 [GLY] B:976 [A] 4.3 98.6
A:192 [TRP] B:976 [A] 4.79 83.81
A:193 [GLY] B:976 [A] 3.85 98.92
A:194 [LYS] B:975 [C] 4.11 89.8
A:194 [LYS] B:976 [A] 4.66 89.8
A:195 [GLN] B:976 [A] 3.8 92.33
A:294 [GLU] B:976 [A] 2.38 98.95
A:318 [ASP] B:973 [G] 4.59 49.94
A:319 [LYS] B:973 [G] 3.4 60.12
A:319 [LYS] B:974 [C] 3.3 base:BB 60.12
A:321 [ALA] B:974 [C] 3.85 84.94
A:323 [LEU] B:973 [G] 4.22 75.62
A:332 [LYS] B:903 [C] 3.14 B:970 [G] 56.89
A:332 [LYS] B:904 [C] 3.39 B:969 [G] 56.89
A:335 [LYS] B:973 [G] 4.35 55.34
A:337 [ILE] B:973 [G] 2.84 60.94
A:337 [ILE] B:974 [C] 4.31 60.94
A:339 [GLN] B:974 [C] 4.59 51.1
A:340 [LYS] B:974 [C] 2.96 90.28
A:340 [LYS] B:975 [C] 3.44 90.28
A:341 [SER] B:974 [C] 2.83 base:BB, base:SC 86.59
A:345 [THR] B:976 [A] 4.88 88.37
A:346 [LEU] B:974 [C] 3.47 74.63
A:346 [LEU] B:975 [C] 4.21 74.63
A:346 [LEU] B:976 [A] 3.67 74.63
A:347 [TYR] B:976 [A] 2.95 base/AA stacks 98.95
A:350 [ARG] B:976 [A] 2.85 98.87
A:373 [SER] B:970 [G] 4.31 B:903 [C] 65.42
A:374 [GLN] B:970 [G] 2.86 B:903 [C] sugar:BB 69.96
A:374 [GLN] B:971 [A] 2.77 B:902 [U] 69.96
A:375 [GLN] B:976 [A] 3.61 base/AA stacks 99.0
A:376 [ASP] B:904 [C] 4.65 B:969 [G] 46.46
A:377 [LEU] B:971 [A] 3.51 B:902 [U] 55.12
A:377 [LEU] B:972 [A] 3.69 B:901 [PSU] 55.12
A:378 [HIS] B:976 [A] 4.4 94.16
A:404 [MET] B:969 [G] 4.5 B:904 [C] 69.06
A:404 [MET] B:970 [G] 3.43 B:903 [C] 69.06
A:406 [GLN] B:969 [G] 3.21 B:904 [C] sugar:SC 30.59
A:429 [MET] B:938 [A] 4.0 86.06
A:432 [VAL] B:938 [A] 3.64 46.43
A:433 [MET] B:938 [A] 3.87 76.45
A:436 [ASN] B:936 [G] 3.85 66.77
A:439 [LYS] B:936 [G] 2.76 71.99
A:453 [VAL] B:938 [A] 4.05 86.24
A:464 [GLN] B:913 [C] 4.03 B:922 [C] 66.6
A:464 [GLN] B:914 [A] 3.97 B:908 [U] 66.6
A:465 [GLY] B:913 [C] 3.45 B:922 [C] 59.59
A:465 [GLY] B:914 [A] 3.77 B:908 [U] 59.59
A:466 [LYS] B:913 [C] 4.08 B:922 [C] 64.28
A:466 [LYS] B:914 [A] 2.83 B:908 [U] 64.28
A:466 [LYS] B:915 [A] 2.58 B:948 [U] 64.28
A:468 [ILE] B:905 [U] 3.72 B:968 [G] 30.7
A:468 [ILE] B:906 [C] 4.09 B:967 [G] 30.7
A:469 [ASN] B:906 [C] 4.41 B:967 [G] 67.35
A:469 [ASN] B:913 [C] 3.54 B:922 [C] 67.35
A:469 [ASN] B:914 [A] 2.96 B:908 [U] 67.35
A:470 [ASN] B:913 [C] 4.09 B:922 [C] 81.66
A:470 [ASN] B:968 [G] 3.92 B:905 [U] 81.66
A:470 [ASN] B:969 [G] 3.69 B:904 [C] 81.66
A:477 [ARG] B:912 [C] 4.16 B:923 [G] 54.97
A:481 [PHE] B:938 [A] 3.36 68.31
A:481 [PHE] B:939 [C] 4.3 B:931 [G] 68.31
A:482 [GLU] B:924 [G] 4.78 B:911 [C] 65.31
A:482 [GLU] B:925 [C] 4.29 B:910 [2MG] 65.31
A:482 [GLU] B:938 [A] 4.31 65.31
A:482 [GLU] B:939 [C] 3.66 B:931 [G] 65.31
A:483 [GLY] B:924 [G] 3.18 B:911 [C] 88.95
A:483 [GLY] B:925 [C] 3.55 B:910 [2MG] 88.95
A:483 [GLY] B:939 [C] 3.17 B:931 [G] 88.95
A:484 [ASP] B:923 [G] 2.51 B:912 [C] sugar:SC 75.18
A:484 [ASP] B:924 [G] 3.2 B:911 [C] sugar:BB 75.18
A:487 [PRO] B:938 [A] 3.77 79.49
A:488 [TYR] B:938 [A] 4.43 83.16
A:488 [TYR] B:939 [C] 3.6 B:931 [G] 83.16
A:488 [TYR] B:940 [C] 2.64 B:930 [G] 83.16
A:491 [TYR] B:936 [G] 2.61 90.1
A:491 [TYR] B:937 [A] 3.41 90.1
A:491 [TYR] B:938 [A] 2.69 base/AA stacks 90.1
A:491 [TYR] B:939 [C] 3.94 B:931 [G] 90.1
A:494 [SER] B:936 [G] 3.81 85.66
A:495 [ARG] B:936 [G] 3.19 sugar:SC 98.84
A:495 [ARG] B:937 [A] 3.56 98.84
A:495 [ARG] B:939 [C] 2.64 B:931 [G] sugar:SC 98.84
A:495 [ARG] B:940 [C] 4.84 B:930 [G] 98.84
A:498 [SER] B:935 [C] 3.87 95.25
A:498 [SER] B:936 [G] 2.63 95.25
A:499 [VAL] B:935 [C] 3.83 87.04
A:499 [VAL] B:936 [G] 4.28 87.04
A:502 [ASN] B:935 [C] 3.41 67.35
A:540 [ASN] B:916 [H2U] 4.59 38.58
A:543 [LYS] B:916 [H2U] 3.36 base:SC 38.02
A:548 [THR] B:914 [A] 4.02 B:908 [U] 74.01
A:548 [THR] B:915 [A] 4.28 B:948 [U] 74.01
A:549 [THR] B:915 [A] 4.89 B:948 [U] 29.74
A:552 [THR] B:914 [A] 3.86 B:908 [U] 52.69
A:552 [THR] B:922 [C] 4.96 B:913 [C] 52.69
A:556 [LYS] B:922 [C] 4.26 B:913 [C] 47.03
A:559 [HIS] B:923 [G] 3.15 B:912 [C] sugar:SC 63.1
A:559 [HIS] B:924 [G] 4.18 B:911 [C] 63.1
A:559 [HIS] B:940 [C] 4.35 B:930 [G] 63.1
A:562 [SER] B:939 [C] 3.86 B:931 [G] 88.61
A:562 [SER] B:940 [C] 3.44 B:930 [G] 88.61
A:563 [SER] B:940 [C] 3.84 B:930 [G] 56.76
A:563 [SER] B:941 [A] 2.81 B:929 [U] 56.76
A:564 [CYS] B:935 [C] 4.68 74.44
A:565 [TYR] B:935 [C] 2.91 base:BB base/AA stacks 70.0
A:565 [TYR] B:936 [G] 3.37 70.0
A:565 [TYR] B:937 [A] 3.46 70.0
A:566 [ASP] B:931 [G] 4.67 B:939 [C] 42.28
A:566 [ASP] B:935 [C] 4.97 42.28
A:566 [ASP] B:940 [C] 3.09 B:930 [G] 42.28
A:568 [LEU] B:935 [C] 2.91 base:BB 44.14
A:569 [TRP] B:934 [I] 3.33 base/AA stacks 60.28
A:569 [TRP] B:935 [C] 3.03 base/AA stacks 60.28
A:570 [VAL] B:935 [C] 3.12 base:BB 89.27
A:571 [ALA] B:934 [I] 4.08 70.86
A:571 [ALA] B:935 [C] 3.06 base:BB 70.86
A:573 [GLN] B:934 [I] 4.6 39.61
A:585 [TYR] B:935 [C] 3.88 83.7
A:605 [GLU] B:936 [G] 4.67 65.88
A:606 [ARG] B:936 [G] 3.58 60.23
A:607 [MET] B:936 [G] 2.77 base:BB, base:BB 91.11
A:607 [MET] B:938 [A] 2.92 base:SC 91.11
A:800 [ARG] B:976 [A] 3.18 0.0

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group1 1F7U_A_B A: Arginyl-tRNA synthetase, Saccharomyces cerevisiae (genetically engineered) B: tRNA(arg) Q05506 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases & HUP domains & Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain tRNA ✘

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1F7U_A_B 2ZUE_A_B 0.58 0.85 3.03 0.21 HUP domains & Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain tRNA compare