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All interfaces > All interologs > Interface groups > group10 > 3X1L_C_I

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

3X1L_C
3X1L_I
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
C:20 [HIS] I:10 [U] 3.56 J:30 [DA] 98.82
C:21 [ALA] I:10 [U] 3.99 J:30 [DA] 81.03
C:22 [GLY] I:9 [U] 3.47 J:31 [DA] 98.56
C:22 [GLY] I:10 [U] 3.15 J:30 [DA] 98.56
C:23 [SER] I:9 [U] 4.62 J:31 [DA] 75.93
C:24 [GLY] I:9 [U] 4.63 J:31 [DA] 95.09
C:32 [LEU] I:13 [A] 4.85 J:27 [DT] 82.74
C:35 [GLN] I:9 [U] 4.28 J:31 [DA] 90.08
C:35 [GLN] I:10 [U] 4.82 J:30 [DA] 90.08
C:46 [TRP] I:9 [U] 3.58 J:31 [DA] 75.22
C:48 [GLN] I:8 [G] 3.64 96.22
C:48 [GLN] I:9 [U] 3.16 J:31 [DA] 96.22
C:49 [SER] I:8 [G] 3.37 87.54
C:49 [SER] I:9 [U] 2.46 J:31 [DA] 87.54
C:51 [LYS] I:6 [A] 3.86 96.51
C:51 [LYS] I:7 [A] 2.77 96.51
C:52 [GLY] I:8 [G] 3.2 98.87
C:53 [VAL] I:8 [G] 3.54 83.85
C:55 [ARG] I:6 [A] 3.42 94.53
C:55 [ARG] I:7 [A] 2.94 94.53
C:55 [ARG] I:8 [G] 4.05 94.53
C:56 [SER] I:8 [G] 2.81 base:SC 77.48
C:59 [ARG] I:8 [G] 5.0 44.24
C:109 [PHE] I:6 [A] 3.54 95.48
C:109 [PHE] I:7 [A] 3.58 95.48
C:110 [GLY] I:6 [A] 3.74 98.54
C:111 [PRO] I:5 [A] 4.47 64.55
C:111 [PRO] I:6 [A] 2.66 sugar:BB 64.55
C:112 [ALA] I:6 [A] 3.45 66.27
C:113 [THR] I:6 [A] 3.25 8.12
C:113 [THR] I:7 [A] 3.52 8.12
C:116 [ALA] I:5 [A] 2.63 sugar:BB 21.05
C:116 [ALA] I:6 [A] 3.51 21.05
C:117 [SER] I:4 [G] 4.16 13.6
C:117 [SER] I:5 [A] 3.45 13.6
C:119 [HIS] I:5 [A] 2.75 sugar:BB 56.97
C:119 [HIS] I:6 [A] 4.93 56.97
C:120 [ALA] I:5 [A] 3.48 87.49
C:120 [ALA] I:6 [A] 4.07 87.49
C:121 [GLY] I:5 [A] 3.75 87.82
C:121 [GLY] I:6 [A] 2.98 87.82
C:123 [VAL] I:6 [A] 4.91 67.48
C:263 [ALA] I:15 [U] 3.56 J:25 [DA] 83.81
C:264 [ARG] I:13 [A] 4.11 J:27 [DT] 93.53
C:264 [ARG] I:15 [U] 3.64 J:25 [DA] 93.53
C:265 [VAL] I:13 [A] 2.74 J:27 [DT] sugar:BB 84.04
C:265 [VAL] I:14 [G] 3.09 84.04
C:265 [VAL] I:15 [U] 3.43 J:25 [DA] 84.04
C:265 [VAL] I:16 [A] 4.59 J:24 [DT] 84.04
C:266 [ARG] I:13 [A] 3.68 J:27 [DT] 77.44
C:266 [ARG] I:14 [G] 3.65 77.44
C:267 [ILE] I:13 [A] 4.28 J:27 [DT] 86.36
C:267 [ILE] I:14 [G] 2.71 86.36
C:267 [ILE] I:16 [A] 3.83 J:24 [DT] 86.36
C:272 [GLY] I:16 [A] 4.03 J:24 [DT] 78.45
C:272 [GLY] I:17 [U] 3.47 J:23 [DA] 78.45
C:273 [THR] I:16 [A] 4.4 J:24 [DT] 89.57
C:273 [THR] I:17 [U] 3.5 J:23 [DA] 89.57
C:274 [VAL] I:15 [U] 4.37 J:25 [DA] 86.66
C:274 [VAL] I:16 [A] 3.4 J:24 [DT] 86.66
C:279 [LEU] I:15 [U] 4.02 J:25 [DA] 94.61
C:280 [TRP] I:13 [A] 3.14 J:27 [DT] base/AA stacks 86.56
C:281 [TYR] I:15 [U] 3.52 J:25 [DA] base:SC 73.89
C:329 [GLN] I:8 [G] 2.61 base:SC 85.92
C:330 [ILE] I:8 [G] 3.9 69.09
C:331 [GLY] I:8 [G] 2.81 base:BB 98.54
C:331 [GLY] I:10 [U] 3.46 J:30 [DA] 98.54
C:331 [GLY] I:11 [G] 4.62 J:29 [DC] 98.54
C:332 [GLY] I:10 [U] 3.21 J:30 [DA] 95.25
C:332 [GLY] I:11 [G] 3.18 J:29 [DC] 95.25
C:333 [ASP] I:10 [U] 4.66 J:30 [DA] 80.38
C:333 [ASP] I:11 [G] 2.84 J:29 [DC] 80.38
C:334 [GLU] I:11 [G] 3.41 J:29 [DC] 80.24
C:335 [THR] I:11 [G] 4.92 J:29 [DC] 92.88
C:335 [THR] I:12 [U] 3.0 J:28 [DA] 92.88
C:335 [THR] I:13 [A] 4.21 J:27 [DT] 92.88
C:336 [VAL] I:13 [A] 4.78 J:27 [DT] 76.23

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group10 3X1L_C_I C: Cmr4, Archaeoglobus fulgidus dsm 4304 (genetically engineered) I: RNA (32-mer), Pyrococcus furiosus com1 (synthetic) O28416 CRISPR-associated protein Cas7/Csa2-related ✘

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
3X1L_C_I 6S8B_D_U,V 0.92 0.72 0.88 0.36 CRISPR-associated protein Cas7/Csa2-related compare