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All interfaces > All interologs > Interface groups > group100 > 4Y4O_1c_1a vs 6S0X_c_a

Interface analysis


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Common contacts -

4Y4O_1c
4Y4O_1a
6S0X_c
6S0X_a
Conserved?
1c:184 [TYR] 1a:1059 [C] c:183 [TYR] a:1070 [U] ✔
1c:195 [VAL] 1a:1055 [A] c:194 [LYS] a:1066 [A] ✔
1c:195 [VAL] 1a:1056 [U] c:194 [LYS] a:1067 [U] ✔
1c:195 [VAL] 1a:1057 [G] c:194 [LYS] a:1068 [G] ✔
1c:195 [VAL] 1a:1205 [U] c:194 [LYS] a:1215 [U] ✔
1c:5 [ILE] 1a:1060 [C] c:5 [ILE] a:1071 [U] ✔
1c:5 [ILE] 1a:1190 [G] c:5 [ILE] a:1200 [G] ✔
1c:14 [ILE] 1a:1113 [C] c:14 [ILE] a:1124 [C] ✔
1c:172 [ARG] 1a:1106 [G] c:171 [THR] a:1117 [G] ✔
1c:172 [ARG] 1a:1107 [C] c:171 [THR] a:1118 [C] ✔
1c:186 [PHE] 1a:1057 [G] c:185 [HIS] a:1068 [G] ✔
1c:193 [TYR] 1a:1055 [A] c:192 [TYR] a:1066 [A] ✔
1c:199 [LYS] 1a:1058 [G] c:198 [LYS] a:1069 [G] ✔
1c:199 [LYS] 1a:1059 [C] c:198 [LYS] a:1070 [U] ✔
1c:178 [LEU] 1a:1112 [C] c:177 [LEU] a:1123 [C] ✔
1c:178 [LEU] 1a:1113 [C] c:177 [LEU] a:1124 [C] ✔
1c:179 [ARG] 1a:1111 [A] c:178 [ARG] a:1122 [A] ✔
1c:179 [ARG] 1a:1112 [C] c:178 [ARG] a:1123 [C] ✔
1c:192 [THR] 1a:1207 [2MG] c:191 [THR] a:1216 [G] ✔
1c:197 [GLY] 1a:1057 [G] c:196 [GLY] a:1068 [G] ✔
1c:197 [GLY] 1a:1058 [G] c:196 [GLY] a:1069 [G] ✔
1c:162 [GLN] 1a:1056 [U] c:161 [ILE] a:1067 [U] ✔
1c:154 [SER] 1a:1058 [G] c:153 [SER] a:1069 [G] ✔
1c:3 [ASN] 1a:1060 [C] c:3 [GLN] a:1071 [U] ✔
1c:3 [ASN] 1a:1061 [G] c:3 [GLN] a:1072 [G] ✔
1c:3 [ASN] 1a:1062 [U] c:3 [GLN] a:1073 [U] ✔
1c:4 [LYS] 1a:1060 [C] c:4 [LYS] a:1071 [U] ✔
1c:4 [LYS] 1a:1190 [G] c:4 [LYS] a:1200 [G] ✔
1c:4 [LYS] 1a:1191 [A] c:4 [LYS] a:1201 [A] ✔
1c:4 [LYS] 1a:1192 [C] c:4 [LYS] a:1202 [C] ✔
1c:2 [GLY] 1a:1060 [C] c:2 [GLY] a:1071 [U] ✔
1c:2 [GLY] 1a:1194 [U] c:2 [GLY] a:1204 [U] ✔
1c:171 [GLY] 1a:1106 [G] c:170 [GLY] a:1117 [G] ✔
1c:194 [GLY] 1a:1055 [A] c:193 [GLY] a:1066 [A] ✔
1c:174 [PRO] 1a:1107 [C] c:173 [PRO] a:1118 [C] ✔
1c:174 [PRO] 1a:1108 [G] c:173 [PRO] a:1119 [G] ✔
1c:176 [HIS] 1a:1108 [G] c:175 [HIS] a:1119 [G] ✔
1c:176 [HIS] 1a:1189 [C] c:175 [HIS] a:1199 [U] ✔
1c:176 [HIS] 1a:1190 [G] c:175 [HIS] a:1200 [G] ✔
1c:188 [LEU] 1a:1204 [A] c:187 [GLU] a:1214 [A] ✔
1c:175 [LEU] 1a:1107 [C] c:174 [LEU] a:1118 [C] ✔
1c:175 [LEU] 1a:1108 [G] c:174 [LEU] a:1119 [G] ✔
1c:177 [THR] 1a:1112 [C] c:176 [THR] a:1123 [C] ✔
1c:173 [VAL] 1a:1106 [G] c:172 [VAL] a:1117 [G] ✔
1c:173 [VAL] 1a:1107 [C] c:172 [VAL] a:1118 [C] ✔
1c:173 [VAL] 1a:1108 [G] c:172 [VAL] a:1119 [G] ✔
1c:156 [ARG] 1a:1055 [A] c:155 [ARG] a:1066 [A] ✔
1c:156 [ARG] 1a:1056 [U] c:155 [ARG] a:1067 [U] ✔
1c:161 [GLU] 1a:532 [A] c:160 [ASP] a:540 [A] ✔
1c:161 [GLU] 1a:1055 [A] c:160 [ASP] a:1066 [A] ✔
1c:161 [GLU] 1a:1056 [U] c:160 [ASP] a:1067 [U] ✔
1c:10 [PHE] 1a:1188 [A] c:10 [LEU] a:1198 [A] ✔
1c:10 [PHE] 1a:1189 [C] c:10 [LEU] a:1199 [U] ✔
1c:5 [ILE] 1a:1189 [C] c:5 [ILE] a:1199 [U] ❌ 6S0X_c_a
1c:186 [PHE] 1a:1058 [G] c:185 [HIS] a:1069 [G] ❌ 6S0X_c_a
1c:193 [TYR] 1a:532 [A] c:192 [TYR] a:540 [A] ❌ 6S0X_c_a
1c:178 [LEU] 1a:1188 [A] c:177 [LEU] a:1198 [A] ❌ 6S0X_c_a
1c:162 [GLN] 1a:1055 [A] c:161 [ILE] a:1066 [A] ❌ 6S0X_c_a
1c:154 [SER] 1a:1056 [U] c:153 [SER] a:1067 [U] ❌ 6S0X_c_a
1c:154 [SER] 1a:1057 [G] c:153 [SER] a:1068 [G] ❌ 6S0X_c_a
1c:160 [ALA] 1a:1055 [A] c:159 [ALA] a:1066 [A] ❌ 6S0X_c_a
1c:3 [ASN] 1a:1190 [G] c:3 [GLN] a:1200 [G] ❌ 6S0X_c_a
1c:3 [ASN] 1a:1191 [A] c:3 [GLN] a:1201 [A] ❌ 6S0X_c_a
1c:3 [ASN] 1a:1193 [G] c:3 [GLN] a:1203 [G] ❌ 6S0X_c_a
1c:2 [GLY] 1a:1061 [G] c:2 [GLY] a:1072 [G] ❌ 6S0X_c_a
1c:2 [GLY] 1a:1062 [U] c:2 [GLY] a:1073 [U] ❌ 6S0X_c_a
1c:2 [GLY] 1a:1197 [G] c:2 [GLY] a:1207 [A] ❌ 6S0X_c_a
1c:171 [GLY] 1a:1107 [C] c:170 [GLY] a:1118 [C] ❌ 6S0X_c_a
1c:194 [GLY] 1a:1205 [U] c:193 [GLY] a:1215 [U] ❌ 6S0X_c_a
1c:190 [ARG] 1a:1204 [A] c:189 [ASP] a:1214 [A] ❌ 6S0X_c_a
1c:190 [ARG] 1a:1205 [U] c:189 [ASP] a:1215 [U] ❌ 6S0X_c_a
1c:176 [HIS] 1a:1111 [A] c:175 [HIS] a:1122 [A] ❌ 6S0X_c_a
1c:176 [HIS] 1a:1112 [C] c:175 [HIS] a:1123 [C] ❌ 6S0X_c_a
1c:188 [LEU] 1a:1057 [G] c:187 [GLU] a:1068 [G] ❌ 6S0X_c_a
1c:177 [THR] 1a:1111 [A] c:176 [THR] a:1122 [A] ❌ 6S0X_c_a
1c:156 [ARG] 1a:532 [A] c:155 [ARG] a:540 [A] ❌ 6S0X_c_a
1c:160 [ALA] 1a:532 [A] c:159 [ALA] a:540 [A] ❌ 4Y4O_1c_1a
1c:175 [LEU] 1a:1192 [C] c:174 [LEU] a:1202 [C] ❌ 4Y4O_1c_1a
1c:176 [HIS] 1a:1107 [C] c:175 [HIS] a:1118 [C] ❌ 4Y4O_1c_1a
1c:176 [HIS] 1a:1192 [C] c:175 [HIS] a:1202 [C] ❌ 4Y4O_1c_1a
1c:176 [HIS] 1a:1191 [A] c:175 [HIS] a:1201 [A] ❌ 4Y4O_1c_1a
1c:177 [THR] 1a:1108 [G] c:176 [THR] a:1119 [G] ❌ 4Y4O_1c_1a
1c:178 [LEU] 1a:1189 [C] c:177 [LEU] a:1199 [U] ❌ 4Y4O_1c_1a
1c:188 [LEU] 1a:1205 [U] c:187 [GLU] a:1215 [U] ❌ 4Y4O_1c_1a
1c:190 [ARG] 1a:1207 [2MG] c:189 [ASP] a:1216 [G] ❌ 4Y4O_1c_1a
1c:193 [TYR] 1a:1207 [2MG] c:192 [TYR] a:1216 [G] ❌ 4Y4O_1c_1a
1c:194 [GLY] 1a:1056 [U] c:193 [GLY] a:1067 [U] ❌ 4Y4O_1c_1a
1c:194 [GLY] 1a:1207 [2MG] c:193 [GLY] a:1216 [G] ❌ 4Y4O_1c_1a
1c:195 [VAL] 1a:1204 [A] c:194 [LYS] a:1214 [A] ❌ 4Y4O_1c_1a
1c:195 [VAL] 1a:1207 [2MG] c:194 [LYS] a:1216 [G] ❌ 4Y4O_1c_1a
1c:199 [LYS] 1a:1057 [G] c:198 [LYS] a:1068 [G] ❌ 4Y4O_1c_1a
1c:2 [GLY] 1a:1193 [G] c:2 [GLY] a:1203 [G] ❌ 4Y4O_1c_1a
1c:2 [GLY] 1a:1059 [C] c:2 [GLY] a:1070 [U] ❌ 4Y4O_1c_1a
1c:3 [ASN] 1a:1197 [G] c:3 [GLN] a:1207 [A] ❌ 4Y4O_1c_1a
1c:3 [ASN] 1a:1059 [C] c:3 [GLN] a:1070 [U] ❌ 4Y4O_1c_1a
1c:3 [ASN] 1a:1194 [U] c:3 [GLN] a:1204 [U] ❌ 4Y4O_1c_1a
1c:4 [LYS] 1a:1059 [C] c:4 [LYS] a:1070 [U] ❌ 4Y4O_1c_1a
1c:4 [LYS] 1a:1193 [G] c:4 [LYS] a:1203 [G] ❌ 4Y4O_1c_1a
1c:27 [LYS] 1a:1256 [A] c:27 [ASP] a:1266 [C] ❌ 6S0X_c:27, 6S0X_a:1266 no longer at interface
1c:27 [LYS] 1a:1257 [U] c:27 [ASP] a:1267 [A] ❌ 6S0X_c:27, 6S0X_a:1267 no longer at interface
1c:26 [LYS] 1a:1255 [G] c:26 [LYS] a:1265 [G] ❌ 6S0X_c:26, 6S0X_a:1265 no longer at interface
1c:26 [LYS] 1a:1256 [A] c:26 [LYS] a:1266 [C] ❌ 6S0X_c:26, 6S0X_a:1266 no longer at interface
1c:26 [LYS] 1a:1279 [A] c:26 [LYS] a:1289 [A] ❌ 6S0X_c:26, 6S0X_a:1289 no longer at interface
1c:192 [THR] 1a:421 [U] c:191 [THR] a:429 [U] ❌ 6S0X_a:429 no longer at interface
1c:162 [GLN] 1a:1196 [U] c:161 [ILE] a:1206 [A] ❌ 6S0X_a:1206 no longer at interface
1c:3 [ASN] 1a:1063 [C] c:3 [GLN] a:1074 [C] ❌ 6S0X_a:1074 no longer at interface
1c:3 [ASN] 1a:1064 [G] c:3 [GLN] a:1075 [G] ❌ 6S0X_a:1075 no longer at interface
1c:176 [HIS] 1a:1065 [U] c:175 [HIS] a:1076 [U] ❌ 6S0X_a:1076 no longer at interface
1c:176 [HIS] 1a:1109 [C] c:175 [HIS] a:1120 [C] ❌ 6S0X_a:1120 no longer at interface
1c:177 [THR] 1a:1110 [A] c:176 [THR] a:1121 [A] ❌ 6S0X_a:1121 no longer at interface
1c:171 [GLY] 1a:1105 [A] c:170 [GLY] a:1116 [A] ❌ 4Y4O_1a:1105 no longer at interface
1c:172 [ARG] 1a:1105 [A] c:171 [THR] a:1116 [A] ❌ 4Y4O_1a:1105 no longer at interface
1c:3 [ASN] 1a:1195 [C] c:3 [GLN] a:1205 [C] ❌ 4Y4O_1a:1195 no longer at interface
1c:164 [ARG] 1a:1057 [G] c:163 [ARG] a:1068 [G] ❌ 6S0X_c:163 no longer at interface
1c:150 [LYS] 1a:1107 [C] c:148 [ILE] a:1118 [C] ❌ 6S0X_c:148 no longer at interface
1c:155 [GLY] 1a:1056 [U] c:154 [GLY] a:1067 [U] ❌ 6S0X_c:154 no longer at interface
1c:155 [GLY] 1a:1057 [G] c:154 [GLY] a:1068 [G] ❌ 6S0X_c:154 no longer at interface
1c:165 [THR] 1a:1057 [G] c:164 [ALA] a:1068 [G] ❌ 6S0X_c:164 no longer at interface
1c:167 [TRP] 1a:1192 [C] c:166 [GLN] a:1202 [C] ❌ 6S0X_c:166 no longer at interface
1c:167 [TRP] 1a:1193 [G] c:166 [GLN] a:1203 [G] ❌ 6S0X_c:166 no longer at interface
1c:180 [ALA] 1a:1112 [C] c:179 [ALA] a:1123 [C] ❌ 6S0X_c:179 no longer at interface
1c:198 [VAL] 1a:1058 [G] c:197 [VAL] a:1069 [G] ❌ 6S0X_c:197 no longer at interface
1c:196 [LEU] 1a:1057 [G] c:195 [LEU] a:1068 [G] ❌ 6S0X_c:195 no longer at interface
1c:163 [ALA] 1a:1055 [A] c:162 [ALA] a:1066 [A] ❌ 6S0X_c:162 no longer at interface
1c:163 [ALA] 1a:1056 [U] c:162 [ALA] a:1067 [U] ❌ 6S0X_c:162 no longer at interface
1c:163 [ALA] 1a:1057 [G] c:162 [ALA] a:1068 [G] ❌ 6S0X_c:162 no longer at interface
1c:159 [GLY] 1a:532 [A] c:158 [GLY] a:540 [A] ❌ 4Y4O_1c:159 no longer at interface
1c:187 [ALA] 1a:1057 [G] c:186 [ALA] a:1068 [G] ❌ 4Y4O_1c:187 no longer at interface
1c:6 [HIS] 1a:1060 [C] c:6 [ASN] a:1071 [U] ❌ 4Y4O_1c:6 no longer at interface
1c:6 [HIS] 1a:1059 [C] c:6 [ASN] a:1070 [U] ❌ 4Y4O_1c:6 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA 0.95 3.84 0.64 0.88 0.95 0.91 0.93 0.52 0.39 0.11 0.42


Other pairs involving 4Y4O_1c_1a or 6S0X_c_a

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0X_c_a 7O7Y_Ac_A2 0.47 0.89 2.86 0.15 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare
6S0X_c_a 7K00_C_A 0.54 0.96 3.49 0.7 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA compare
6S0X_c_a 7RYG_c_a 0.55 0.96 3.4 0.67 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA compare
6S0X_c_a 7O7Z_Ac_A2 0.48 0.89 2.84 0.15 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare
4Y4O_1c_1a 6S0X_c_a 0.52 0.95 3.84 0.64 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA compare
4Y4O_1c_1a 7K00_C_A 0.83 0.98 0.9 0.76 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA compare
4Y4O_1c_1a 7O7Y_Ac_A2 0.75 0.92 2.16 0.21 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare
4Y4O_1c_1a 7RYG_c_a 0.47 0.91 5.12 0.26 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA compare
4Y4O_1c_1a 7O7Z_Ac_A2 0.76 0.92 2.2 0.21 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare