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All interfaces > All interologs > Interface groups > group100 > 4Y4O_1c_1a vs 7K00_C_A

Interface analysis


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Common contacts -

4Y4O_1c
4Y4O_1a
7K00_C
7K00_A
Conserved?
1c:184 [TYR] 1a:1059 [C] C:184 [TYR] A:1059 [C] ✔
1c:164 [ARG] 1a:1057 [G] C:164 [ARG] A:1057 [G] ✔
1c:195 [VAL] 1a:1056 [U] C:195 [VAL] A:1056 [U] ✔
1c:195 [VAL] 1a:1057 [G] C:195 [VAL] A:1057 [G] ✔
1c:195 [VAL] 1a:1205 [U] C:195 [VAL] A:1205 [U] ✔
1c:5 [ILE] 1a:1189 [C] C:5 [VAL] A:1189 [U] ✔
1c:5 [ILE] 1a:1190 [G] C:5 [VAL] A:1190 [G] ✔
1c:14 [ILE] 1a:1113 [C] C:14 [ILE] A:1113 [C] ✔
1c:26 [LYS] 1a:1255 [G] C:26 [THR] A:1255 [G] ✔
1c:172 [ARG] 1a:1106 [G] C:172 [ARG] A:1106 [G] ✔
1c:172 [ARG] 1a:1107 [C] C:172 [ARG] A:1107 [C] ✔
1c:155 [GLY] 1a:1056 [U] C:155 [GLY] A:1056 [U] ✔
1c:155 [GLY] 1a:1057 [G] C:155 [GLY] A:1057 [G] ✔
1c:165 [THR] 1a:1057 [G] C:165 [THR] A:1057 [G] ✔
1c:193 [TYR] 1a:532 [A] C:193 [TYR] A:532 [A] ✔
1c:193 [TYR] 1a:1055 [A] C:193 [TYR] A:1055 [A] ✔
1c:193 [TYR] 1a:1206 [G] C:193 [TYR] A:1206 [G] ✔
1c:199 [LYS] 1a:1058 [G] C:199 [LYS] A:1058 [G] ✔
1c:199 [LYS] 1a:1059 [C] C:199 [LYS] A:1059 [C] ✔
1c:167 [TRP] 1a:1192 [C] C:167 [TRP] A:1192 [C] ✔
1c:167 [TRP] 1a:1193 [G] C:167 [TRP] A:1193 [G] ✔
1c:178 [LEU] 1a:1112 [C] C:178 [LEU] A:1112 [C] ✔
1c:178 [LEU] 1a:1113 [C] C:178 [LEU] A:1113 [C] ✔
1c:178 [LEU] 1a:1188 [A] C:178 [LEU] A:1188 [A] ✔
1c:179 [ARG] 1a:1111 [A] C:179 [ARG] A:1111 [A] ✔
1c:179 [ARG] 1a:1112 [C] C:179 [ARG] A:1112 [C] ✔
1c:192 [THR] 1a:421 [U] C:192 [THR] A:421 [U] ✔
1c:192 [THR] 1a:1206 [G] C:192 [THR] A:1206 [G] ✔
1c:192 [THR] 1a:1207 [2MG] C:192 [THR] A:1207 [2MG] ✔
1c:197 [GLY] 1a:1057 [G] C:197 [GLY] A:1057 [G] ✔
1c:197 [GLY] 1a:1058 [G] C:197 [GLY] A:1058 [G] ✔
1c:162 [GLN] 1a:1055 [A] C:162 [ILE] A:1055 [A] ✔
1c:162 [GLN] 1a:1056 [U] C:162 [ILE] A:1056 [U] ✔
1c:162 [GLN] 1a:1196 [U] C:162 [ILE] A:1196 [A] ✔
1c:154 [SER] 1a:1057 [G] C:154 [SER] A:1057 [G] ✔
1c:154 [SER] 1a:1058 [G] C:154 [SER] A:1058 [G] ✔
1c:160 [ALA] 1a:1055 [A] C:160 [ALA] A:1055 [A] ✔
1c:3 [ASN] 1a:1060 [C] C:3 [GLN] A:1060 [U] ✔
1c:3 [ASN] 1a:1061 [G] C:3 [GLN] A:1061 [G] ✔
1c:3 [ASN] 1a:1062 [U] C:3 [GLN] A:1062 [U] ✔
1c:3 [ASN] 1a:1190 [G] C:3 [GLN] A:1190 [G] ✔
1c:3 [ASN] 1a:1191 [A] C:3 [GLN] A:1191 [A] ✔
1c:180 [ALA] 1a:1112 [C] C:180 [ALA] A:1112 [C] ✔
1c:198 [VAL] 1a:1058 [G] C:198 [VAL] A:1058 [G] ✔
1c:4 [LYS] 1a:1060 [C] C:4 [LYS] A:1060 [U] ✔
1c:4 [LYS] 1a:1190 [G] C:4 [LYS] A:1190 [G] ✔
1c:4 [LYS] 1a:1191 [A] C:4 [LYS] A:1191 [A] ✔
1c:4 [LYS] 1a:1192 [C] C:4 [LYS] A:1192 [C] ✔
1c:196 [LEU] 1a:1057 [G] C:196 [ILE] A:1057 [G] ✔
1c:2 [GLY] 1a:1062 [U] C:2 [GLY] A:1062 [U] ✔
1c:2 [GLY] 1a:1194 [U] C:2 [GLY] A:1194 [U] ✔
1c:171 [GLY] 1a:1106 [G] C:171 [GLY] A:1106 [G] ✔
1c:171 [GLY] 1a:1107 [C] C:171 [GLY] A:1107 [C] ✔
1c:194 [GLY] 1a:1055 [A] C:194 [GLY] A:1055 [A] ✔
1c:194 [GLY] 1a:1205 [U] C:194 [GLY] A:1205 [U] ✔
1c:194 [GLY] 1a:1206 [G] C:194 [GLY] A:1206 [G] ✔
1c:190 [ARG] 1a:1204 [A] C:190 [HIS] A:1204 [A] ✔
1c:190 [ARG] 1a:1205 [U] C:190 [HIS] A:1205 [U] ✔
1c:174 [PRO] 1a:1107 [C] C:174 [PRO] A:1107 [C] ✔
1c:174 [PRO] 1a:1108 [G] C:174 [PRO] A:1108 [G] ✔
1c:176 [HIS] 1a:1065 [U] C:176 [HIS] A:1065 [U] ✔
1c:176 [HIS] 1a:1108 [G] C:176 [HIS] A:1108 [G] ✔
1c:176 [HIS] 1a:1109 [C] C:176 [HIS] A:1109 [C] ✔
1c:176 [HIS] 1a:1111 [A] C:176 [HIS] A:1111 [A] ✔
1c:176 [HIS] 1a:1112 [C] C:176 [HIS] A:1112 [C] ✔
1c:176 [HIS] 1a:1189 [C] C:176 [HIS] A:1189 [U] ✔
1c:176 [HIS] 1a:1190 [G] C:176 [HIS] A:1190 [G] ✔
1c:188 [LEU] 1a:1057 [G] C:188 [GLU] A:1057 [G] ✔
1c:188 [LEU] 1a:1204 [A] C:188 [GLU] A:1204 [A] ✔
1c:175 [LEU] 1a:1107 [C] C:175 [LEU] A:1107 [C] ✔
1c:175 [LEU] 1a:1108 [G] C:175 [LEU] A:1108 [G] ✔
1c:191 [THR] 1a:1206 [G] C:191 [THR] A:1206 [G] ✔
1c:163 [ALA] 1a:1055 [A] C:163 [ALA] A:1055 [A] ✔
1c:163 [ALA] 1a:1056 [U] C:163 [ALA] A:1056 [U] ✔
1c:163 [ALA] 1a:1057 [G] C:163 [ALA] A:1057 [G] ✔
1c:177 [THR] 1a:1110 [A] C:177 [THR] A:1110 [A] ✔
1c:177 [THR] 1a:1111 [A] C:177 [THR] A:1111 [A] ✔
1c:177 [THR] 1a:1112 [C] C:177 [THR] A:1112 [C] ✔
1c:173 [VAL] 1a:1106 [G] C:173 [VAL] A:1106 [G] ✔
1c:173 [VAL] 1a:1107 [C] C:173 [VAL] A:1107 [C] ✔
1c:173 [VAL] 1a:1108 [G] C:173 [VAL] A:1108 [G] ✔
1c:156 [ARG] 1a:532 [A] C:156 [ARG] A:532 [A] ✔
1c:156 [ARG] 1a:1055 [A] C:156 [ARG] A:1055 [A] ✔
1c:156 [ARG] 1a:1056 [U] C:156 [ARG] A:1056 [U] ✔
1c:156 [ARG] 1a:1206 [G] C:156 [ARG] A:1206 [G] ✔
1c:161 [GLU] 1a:532 [A] C:161 [GLU] A:532 [A] ✔
1c:161 [GLU] 1a:1055 [A] C:161 [GLU] A:1055 [A] ✔
1c:161 [GLU] 1a:1056 [U] C:161 [GLU] A:1056 [U] ✔
1c:10 [PHE] 1a:1188 [A] C:10 [ILE] A:1188 [A] ✔
1c:10 [PHE] 1a:1189 [C] C:10 [ILE] A:1189 [U] ✔
1c:195 [VAL] 1a:1055 [A] C:195 [VAL] A:1055 [A] ❌ 7K00_C_A
1c:195 [VAL] 1a:1206 [G] C:195 [VAL] A:1206 [G] ❌ 7K00_C_A
1c:150 [LYS] 1a:1107 [C] C:150 [LYS] A:1107 [C] ❌ 7K00_C_A
1c:5 [ILE] 1a:1060 [C] C:5 [VAL] A:1060 [U] ❌ 7K00_C_A
1c:154 [SER] 1a:1056 [U] C:154 [SER] A:1056 [U] ❌ 7K00_C_A
1c:3 [ASN] 1a:1063 [C] C:3 [GLN] A:1063 [C] ❌ 7K00_C_A
1c:3 [ASN] 1a:1064 [G] C:3 [GLN] A:1064 [G] ❌ 7K00_C_A
1c:3 [ASN] 1a:1193 [G] C:3 [GLN] A:1193 [G] ❌ 7K00_C_A
1c:2 [GLY] 1a:1060 [C] C:2 [GLY] A:1060 [U] ❌ 7K00_C_A
1c:2 [GLY] 1a:1061 [G] C:2 [GLY] A:1061 [G] ❌ 7K00_C_A
1c:150 [LYS] 1a:1192 [C] C:150 [LYS] A:1192 [C] ❌ 4Y4O_1c_1a
1c:176 [HIS] 1a:1191 [A] C:176 [HIS] A:1191 [A] ❌ 4Y4O_1c_1a
1c:188 [LEU] 1a:1058 [G] C:188 [GLU] A:1058 [G] ❌ 4Y4O_1c_1a
1c:192 [THR] 1a:532 [A] C:192 [THR] A:532 [A] ❌ 4Y4O_1c_1a
1c:194 [GLY] 1a:1056 [U] C:194 [GLY] A:1056 [U] ❌ 4Y4O_1c_1a
1c:195 [VAL] 1a:1204 [A] C:195 [VAL] A:1204 [A] ❌ 4Y4O_1c_1a
1c:2 [GLY] 1a:1191 [A] C:2 [GLY] A:1191 [A] ❌ 4Y4O_1c_1a
1c:2 [GLY] 1a:1064 [G] C:2 [GLY] A:1064 [G] ❌ 4Y4O_1c_1a
1c:2 [GLY] 1a:1193 [G] C:2 [GLY] A:1193 [G] ❌ 4Y4O_1c_1a
1c:2 [GLY] 1a:1190 [G] C:2 [GLY] A:1190 [G] ❌ 4Y4O_1c_1a
1c:2 [GLY] 1a:1063 [C] C:2 [GLY] A:1063 [C] ❌ 4Y4O_1c_1a
1c:27 [LYS] 1a:1256 [A] C:27 [LYS] A:1256 [A] ❌ 7K00_C:27, 7K00_A:1256 no longer at interface
1c:27 [LYS] 1a:1257 [U] C:27 [LYS] A:1257 [A] ❌ 7K00_C:27, 7K00_A:1257 no longer at interface
1c:26 [LYS] 1a:1256 [A] C:26 [THR] A:1256 [A] ❌ 7K00_A:1256 no longer at interface
1c:26 [LYS] 1a:1279 [A] C:26 [THR] A:1279 [G] ❌ 7K00_A:1279 no longer at interface
1c:2 [GLY] 1a:1197 [G] C:2 [GLY] A:1197 [A] ❌ 7K00_A:1197 no longer at interface
1c:161 [GLU] 1a:534 [U] C:161 [GLU] A:534 [U] ❌ 4Y4O_1a:534 no longer at interface
1c:25 [GLY] 1a:1278 [U] C:25 [ASN] A:1278 [G] ❌ 4Y4O_1c:25, 4Y4O_1a:1278 no longer at interface
1c:186 [PHE] 1a:1057 [G] C:186 [THR] A:1057 [G] ❌ 7K00_C:186 no longer at interface
1c:186 [PHE] 1a:1058 [G] C:186 [THR] A:1058 [G] ❌ 7K00_C:186 no longer at interface
1c:127 [ARG] 1a:421 [U] C:127 [ARG] A:421 [U] ❌ 4Y4O_1c:127 no longer at interface
1c:169 [ALA] 1a:1106 [G] C:169 [ARG] A:1106 [G] ❌ 4Y4O_1c:169 no longer at interface
1c:169 [ALA] 1a:1107 [C] C:169 [ARG] A:1107 [C] ❌ 4Y4O_1c:169 no longer at interface
1c:206 [GLU] 1a:1111 [A] C:206 [GLU] A:1111 [A] ❌ 4Y4O_1c:206 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA 0.98 0.9 0.76 0.98 0.98 0.95 0.94 0.83 0.78 0.46 0.38


Other pairs involving 4Y4O_1c_1a or 7K00_C_A

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1c_1a 6S0X_c_a 0.52 0.95 3.84 0.64 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA compare
6S0X_c_a 7K00_C_A 0.54 0.96 3.49 0.7 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA compare
4Y4O_1c_1a 7K00_C_A 0.83 0.98 0.9 0.76 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA compare
4Y4O_1c_1a 7O7Y_Ac_A2 0.75 0.92 2.16 0.21 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare
7K00_C_A 7O7Y_Ac_A2 0.75 0.91 1.98 0.18 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare
4Y4O_1c_1a 7O7Z_Ac_A2 0.76 0.92 2.2 0.21 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare
7K00_C_A 7O7Z_Ac_A2 0.75 0.91 2.03 0.19 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare
4Y4O_1c_1a 7RYG_c_a 0.47 0.91 5.12 0.26 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA compare
7K00_C_A 7RYG_c_a 0.70 0.93 4.95 0.51 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA compare