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All interfaces > All interologs > Interface groups > group100 > 6S0X_c_a vs 7O7Y_Ac_A2

Interface analysis


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Licorice
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Licorice
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Common contacts -

6S0X_c
6S0X_a
7O7Y_Ac
7O7Y_A2
Conserved?
c:178 [ARG] a:1122 [A] Ac:163 [PRO] A2:1389 [A] ✔
c:178 [ARG] a:1123 [C] Ac:163 [PRO] A2:1390 [C] ✔
c:198 [LYS] a:1069 [G] Ac:185 [LYS] A2:1336 [G] ✔
c:198 [LYS] a:1070 [U] Ac:185 [LYS] A2:1337 [C] ✔
c:175 [HIS] a:1119 [G] Ac:160 [SER] A2:1386 [G] ✔
c:175 [HIS] a:1199 [U] Ac:160 [SER] A2:1483 [C] ✔
c:175 [HIS] a:1200 [G] Ac:160 [SER] A2:1484 [A] ✔
c:155 [ARG] a:1066 [A] Ac:141 [LYS] A2:1333 [A] ✔
c:155 [ARG] a:1067 [U] Ac:141 [LYS] A2:1334 [U] ✔
c:160 [ASP] a:540 [A] Ac:145 [GLN] A2:629 [A] ✔
c:160 [ASP] a:1066 [A] Ac:145 [GLN] A2:1333 [A] ✔
c:160 [ASP] a:1067 [U] Ac:145 [GLN] A2:1334 [U] ✔
c:173 [PRO] a:1118 [C] Ac:158 [ILE] A2:1385 [C] ✔
c:173 [PRO] a:1119 [G] Ac:158 [ILE] A2:1386 [G] ✔
c:186 [ALA] a:1068 [G] Ac:173 [ARG] A2:1335 [G] ✔
c:170 [GLY] a:1117 [G] Ac:155 [GLY] A2:1384 [A2M] ✔
c:194 [LYS] a:1067 [U] Ac:181 [VAL] A2:1334 [U] ✔
c:194 [LYS] a:1068 [G] Ac:181 [VAL] A2:1335 [G] ✔
c:194 [LYS] a:1215 [U] Ac:181 [VAL] A2:1500 [U] ✔
c:192 [TYR] a:1066 [A] Ac:179 [GLN] A2:1333 [A] ✔
c:192 [TYR] a:1216 [G] Ac:179 [GLN] A2:1501 [G] ✔
c:189 [ASP] a:1216 [G] Ac:176 [LEU] A2:1501 [G] ✔
c:171 [THR] a:1117 [G] Ac:156 [LEU] A2:1384 [A2M] ✔
c:171 [THR] a:1118 [C] Ac:156 [LEU] A2:1385 [C] ✔
c:196 [GLY] a:1068 [G] Ac:183 [GLY] A2:1335 [G] ✔
c:196 [GLY] a:1069 [G] Ac:183 [GLY] A2:1336 [G] ✔
c:193 [GLY] a:1066 [A] Ac:180 [GLY] A2:1333 [A] ✔
c:193 [GLY] a:1216 [G] Ac:180 [GLY] A2:1501 [G] ✔
c:177 [LEU] a:1123 [C] Ac:162 [ASP] A2:1390 [C] ✔
c:177 [LEU] a:1124 [C] Ac:162 [ASP] A2:1391 [U] ✔
c:177 [LEU] a:1199 [U] Ac:162 [ASP] A2:1483 [C] ✔
c:174 [LEU] a:1118 [C] Ac:159 [HIS] A2:1385 [C] ✔
c:174 [LEU] a:1119 [G] Ac:159 [HIS] A2:1386 [G] ✔
c:174 [LEU] a:1202 [C] Ac:159 [HIS] A2:1486 [U] ✔
c:191 [THR] a:1216 [G] Ac:178 [ARG] A2:1501 [G] ✔
c:161 [ILE] a:1067 [U] Ac:146 [ARG] A2:1334 [U] ✔
c:176 [THR] a:1123 [C] Ac:161 [GLY] A2:1390 [C] ✔
c:172 [VAL] a:1117 [G] Ac:157 [MET] A2:1384 [A2M] ✔
c:172 [VAL] a:1118 [C] Ac:157 [MET] A2:1385 [C] ✔
c:172 [VAL] a:1119 [G] Ac:157 [MET] A2:1386 [G] ✔
c:153 [SER] a:1069 [G] Ac:139 [SER] A2:1336 [G] ✔
c:198 [LYS] a:1068 [G] Ac:185 [LYS] A2:1335 [G] ❌ 7O7Y_Ac_A2
c:175 [HIS] a:1118 [C] Ac:160 [SER] A2:1385 [C] ❌ 7O7Y_Ac_A2
c:175 [HIS] a:1201 [A] Ac:160 [SER] A2:1485 [A] ❌ 7O7Y_Ac_A2
c:175 [HIS] a:1202 [C] Ac:160 [SER] A2:1486 [U] ❌ 7O7Y_Ac_A2
c:185 [HIS] a:1068 [G] Ac:172 [VAL] A2:1335 [G] ❌ 7O7Y_Ac_A2
c:194 [LYS] a:1066 [A] Ac:181 [VAL] A2:1333 [A] ❌ 7O7Y_Ac_A2
c:194 [LYS] a:1214 [A] Ac:181 [VAL] A2:1498 [G] ❌ 7O7Y_Ac_A2
c:194 [LYS] a:1216 [G] Ac:181 [VAL] A2:1501 [G] ❌ 7O7Y_Ac_A2
c:187 [GLU] a:1214 [A] Ac:174 [HIS] A2:1498 [G] ❌ 7O7Y_Ac_A2
c:187 [GLU] a:1215 [U] Ac:174 [HIS] A2:1500 [U] ❌ 7O7Y_Ac_A2
c:193 [GLY] a:1067 [U] Ac:180 [GLY] A2:1334 [U] ❌ 7O7Y_Ac_A2
c:176 [THR] a:1119 [G] Ac:161 [GLY] A2:1386 [G] ❌ 7O7Y_Ac_A2
c:153 [SER] a:1068 [G] Ac:139 [SER] A2:1335 [G] ❌ 6S0X_c_a
c:155 [ARG] a:540 [A] Ac:141 [LYS] A2:629 [A] ❌ 6S0X_c_a
c:155 [ARG] a:1216 [G] Ac:141 [LYS] A2:1501 [G] ❌ 6S0X_c_a
c:161 [ILE] a:1066 [A] Ac:146 [ARG] A2:1333 [A] ❌ 6S0X_c_a
c:170 [GLY] a:1118 [C] Ac:155 [GLY] A2:1385 [C] ❌ 6S0X_c_a
c:174 [LEU] a:1201 [A] Ac:159 [HIS] A2:1485 [A] ❌ 6S0X_c_a
c:174 [LEU] a:1199 [U] Ac:159 [HIS] A2:1483 [C] ❌ 6S0X_c_a
c:174 [LEU] a:1200 [G] Ac:159 [HIS] A2:1484 [A] ❌ 6S0X_c_a
c:175 [HIS] a:1122 [A] Ac:160 [SER] A2:1389 [A] ❌ 6S0X_c_a
c:176 [THR] a:1198 [A] Ac:161 [GLY] A2:1482 [G] ❌ 6S0X_c_a
c:176 [THR] a:1199 [U] Ac:161 [GLY] A2:1483 [C] ❌ 6S0X_c_a
c:176 [THR] a:1200 [G] Ac:161 [GLY] A2:1484 [A] ❌ 6S0X_c_a
c:176 [THR] a:1122 [A] Ac:161 [GLY] A2:1389 [A] ❌ 6S0X_c_a
c:177 [LEU] a:1198 [A] Ac:162 [ASP] A2:1482 [G] ❌ 6S0X_c_a
c:177 [LEU] a:1122 [A] Ac:162 [ASP] A2:1389 [A] ❌ 6S0X_c_a
c:185 [HIS] a:1069 [G] Ac:172 [VAL] A2:1336 [G] ❌ 6S0X_c_a
c:185 [HIS] a:1070 [U] Ac:172 [VAL] A2:1337 [C] ❌ 6S0X_c_a
c:187 [GLU] a:1068 [G] Ac:174 [HIS] A2:1335 [G] ❌ 6S0X_c_a
c:187 [GLU] a:1069 [G] Ac:174 [HIS] A2:1336 [G] ❌ 6S0X_c_a
c:189 [ASP] a:1215 [U] Ac:176 [LEU] A2:1500 [U] ❌ 6S0X_c_a
c:192 [TYR] a:540 [A] Ac:179 [GLN] A2:629 [A] ❌ 6S0X_c_a
c:193 [GLY] a:1215 [U] Ac:180 [GLY] A2:1500 [U] ❌ 6S0X_c_a
c:170 [GLY] a:1116 [A] Ac:155 [GLY] A2:1383 [A] ❌ 7O7Y_A2:1383 no longer at interface
c:171 [THR] a:1116 [A] Ac:156 [LEU] A2:1383 [A] ❌ 7O7Y_A2:1383 no longer at interface
c:161 [ILE] a:1206 [A] Ac:146 [ARG] A2:1490 [A] ❌ 6S0X_a:1206 no longer at interface
c:175 [HIS] a:1120 [C] Ac:160 [SER] A2:1387 [A] ❌ 6S0X_a:1120 no longer at interface
c:191 [THR] a:521 [A] Ac:178 [ARG] A2:610 [PSU] ❌ 6S0X_a:521 no longer at interface
c:23 [TYR] a:1289 [A] Ac:5 [ILE] A2:1580 [A] ❌ 6S0X_c:23, 6S0X_a:1289 no longer at interface
c:23 [TYR] a:1288 [A] Ac:5 [ILE] A2:1579 [U] ❌ 6S0X_c:23, 6S0X_a:1288 no longer at interface
c:24 [ALA] a:1289 [A] Ac:6 [SER] A2:1580 [A] ❌ 6S0X_c:24, 6S0X_a:1289 no longer at interface
c:24 [ALA] a:1266 [C] Ac:6 [SER] A2:1552 [U] ❌ 6S0X_c:24, 6S0X_a:1266 no longer at interface
c:24 [ALA] a:1288 [A] Ac:6 [SER] A2:1579 [U] ❌ 6S0X_c:24, 6S0X_a:1288 no longer at interface
c:25 [GLU] a:1289 [A] Ac:7 [LYS] A2:1580 [A] ❌ 6S0X_c:25, 6S0X_a:1289 no longer at interface
c:25 [GLU] a:1288 [A] Ac:7 [LYS] A2:1579 [U] ❌ 6S0X_c:25, 6S0X_a:1288 no longer at interface
c:26 [LYS] a:1263 [G] Ac:8 [LYS] A2:1549 [G] ❌ 6S0X_c:26, 6S0X_a:1263 no longer at interface
c:26 [LYS] a:1265 [G] Ac:8 [LYS] A2:1551 [G] ❌ 6S0X_c:26, 6S0X_a:1265 no longer at interface
c:26 [LYS] a:1264 [G] Ac:8 [LYS] A2:1550 [U] ❌ 6S0X_c:26, 6S0X_a:1264 no longer at interface
c:27 [ASP] a:1266 [C] Ac:9 [ARG] A2:1552 [U] ❌ 6S0X_c:27, 6S0X_a:1266 no longer at interface
c:27 [ASP] a:1265 [G] Ac:9 [ARG] A2:1551 [G] ❌ 6S0X_c:27, 6S0X_a:1265 no longer at interface
c:159 [ALA] a:540 [A] Ac:144 [GLY] A2:629 [A] ❌ 7O7Y_Ac:144 no longer at interface
c:183 [TYR] a:1070 [U] Ac:170 [THR] A2:1337 [C] ❌ 7O7Y_Ac:170 no longer at interface
c:149 [LYS] a:1202 [C] Ac:135 [GLU] A2:1486 [U] ❌ 6S0X_c:149 no longer at interface
c:154 [GLY] a:1067 [U] Ac:140 [GLY] A2:1334 [U] ❌ 6S0X_c:154 no longer at interface
c:154 [GLY] a:1068 [G] Ac:140 [GLY] A2:1335 [G] ❌ 6S0X_c:154 no longer at interface
c:162 [ALA] a:1067 [U] Ac:147 [ALA] A2:1334 [U] ❌ 6S0X_c:162 no longer at interface
c:162 [ALA] a:1068 [G] Ac:147 [ALA] A2:1335 [G] ❌ 6S0X_c:162 no longer at interface
c:162 [ALA] a:1066 [A] Ac:147 [ALA] A2:1333 [A] ❌ 6S0X_c:162 no longer at interface
c:163 [ARG] a:1068 [G] Ac:148 [LYS] A2:1335 [G] ❌ 6S0X_c:163 no longer at interface
c:166 [GLN] a:1201 [A] Ac:151 [LYS] A2:1485 [A] ❌ 6S0X_c:166 no longer at interface
c:166 [GLN] a:1202 [C] Ac:151 [LYS] A2:1486 [U] ❌ 6S0X_c:166 no longer at interface
c:166 [GLN] a:1203 [G] Ac:151 [LYS] A2:1487 [A] ❌ 6S0X_c:166 no longer at interface
c:179 [ALA] a:1123 [C] Ac:166 [TYR] A2:1390 [C] ❌ 6S0X_c:179 no longer at interface
c:190 [THR] a:1216 [G] Ac:177 [LEU] A2:1501 [G] ❌ 6S0X_c:190 no longer at interface
c:195 [LEU] a:1068 [G] Ac:182 [LEU] A2:1335 [G] ❌ 6S0X_c:195 no longer at interface
c:197 [VAL] a:1068 [G] Ac:184 [ILE] A2:1335 [G] ❌ 6S0X_c:197 no longer at interface
c:197 [VAL] a:1069 [G] Ac:184 [ILE] A2:1336 [G] ❌ 6S0X_c:197 no longer at interface
c:202 [TYR] a:1118 [C] Ac:189 [MET] A2:1385 [C] ❌ 6S0X_c:202 no longer at interface
c:44 [ASN] a:1214 [A] Ac:27 [ARG] A2:1498 [G] ❌ 6S0X_c:44 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) 0.89 2.86 0.15 0.7 0.89 0.7 0.75 0.47 0.41 0.19 0.51


Other pairs involving 6S0X_c_a or 7O7Y_Ac_A2

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0X_c_a 7O7Y_Ac_A2 0.47 0.89 2.86 0.15 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare
6S0X_c_a 7K00_C_A 0.54 0.96 3.49 0.7 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA compare
6S0X_c_a 7RYG_c_a 0.55 0.96 3.4 0.67 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA compare
6S0X_c_a 7O7Z_Ac_A2 0.48 0.89 2.84 0.15 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare
4Y4O_1c_1a 6S0X_c_a 0.52 0.95 3.84 0.64 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Bacterial small subunit ribosomal RNA compare
4Y4O_1c_1a 7O7Y_Ac_A2 0.75 0.92 2.16 0.21 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare
7K00_C_A 7O7Y_Ac_A2 0.75 0.91 1.98 0.18 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare