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All interfaces > All interologs > Interface groups > group100 > 7O7Z_Ac_A2

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Licorice
Surface

RNA

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Licorice
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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

7O7Z_Ac
7O7Z_A2
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
Ac:4 [GLN] A2:1553 [G] 3.91 0.0
Ac:4 [GLN] A2:1579 [U] 3.22 0.0
Ac:5 [ILE] A2:1554 [C] 4.67 0.0
Ac:5 [ILE] A2:1579 [U] 2.96 0.0
Ac:5 [ILE] A2:1580 [A] 4.46 0.0
Ac:6 [SER] A2:1552 [U] 4.49 0.0
Ac:6 [SER] A2:1579 [U] 3.52 0.0
Ac:6 [SER] A2:1580 [A] 3.77 0.0
Ac:7 [LYS] A2:1579 [U] 4.38 0.0
Ac:7 [LYS] A2:1580 [A] 2.97 0.0
Ac:8 [LYS] A2:1549 [G] 4.86 A2:1585 [G] 0.0
Ac:8 [LYS] A2:1550 [U] 2.69 A2:1584 [C] 0.0
Ac:8 [LYS] A2:1551 [G] 3.54 A2:1583 [C] 0.0
Ac:9 [ARG] A2:1551 [G] 4.72 A2:1583 [C] 0.0
Ac:9 [ARG] A2:1552 [U] 3.36 0.0
Ac:9 [ARG] A2:1553 [G] 3.2 0.0
Ac:9 [ARG] A2:1554 [C] 4.15 0.0
Ac:27 [ARG] A2:1498 [G] 4.4 0.0
Ac:27 [ARG] A2:1499 [A] 3.08 A2:1334 [U] 0.0
Ac:135 [GLU] A2:1486 [U] 4.24 A2:1342 [C] 0.0
Ac:139 [SER] A2:1334 [U] 4.99 A2:1499 [A] 0.0
Ac:139 [SER] A2:1335 [G] 3.35 A2:1497 [U] 0.0
Ac:139 [SER] A2:1336 [G] 3.95 A2:1493 [U] 0.0
Ac:140 [GLY] A2:1334 [U] 3.7 A2:1499 [A] 0.0
Ac:140 [GLY] A2:1335 [G] 3.69 A2:1497 [U] 0.0
Ac:141 [LYS] A2:629 [A] 3.23 0.0
Ac:141 [LYS] A2:1333 [A] 3.28 A2:1494 [C] base:SC 0.0
Ac:141 [LYS] A2:1334 [U] 4.08 A2:1499 [A] 0.0
Ac:141 [LYS] A2:1501 [G] 4.45 A2:1330 [U] 0.0
Ac:143 [ARG] A2:608 [U] 3.14 sugar:SC base/AA stacks 0.0
Ac:145 [GLN] A2:629 [A] 3.53 0.0
Ac:145 [GLN] A2:1333 [A] 2.59 A2:1494 [C] sugar:BB 0.0
Ac:145 [GLN] A2:1334 [U] 3.7 A2:1499 [A] 0.0
Ac:146 [ARG] A2:1333 [A] 4.45 A2:1494 [C] 0.0
Ac:146 [ARG] A2:1334 [U] 3.49 A2:1499 [A] 0.0
Ac:146 [ARG] A2:1490 [A] 3.19 base/AA stacks 0.0
Ac:147 [ALA] A2:1333 [A] 4.75 A2:1494 [C] 0.0
Ac:147 [ALA] A2:1334 [U] 2.9 A2:1499 [A] 0.0
Ac:147 [ALA] A2:1335 [G] 4.21 A2:1497 [U] 0.0
Ac:151 [LYS] A2:1485 [A] 4.68 0.0
Ac:151 [LYS] A2:1486 [U] 2.53 A2:1342 [C] 0.0
Ac:151 [LYS] A2:1487 [A] 3.38 A2:1341 [U] 0.0
Ac:155 [GLY] A2:1384 [A2M] 4.07 A2:1347 [U] 0.0
Ac:156 [LEU] A2:1384 [A2M] 3.32 A2:1347 [U] 0.0
Ac:156 [LEU] A2:1385 [C] 3.29 A2:1346 [G] 0.0
Ac:157 [MET] A2:1384 [A2M] 4.5 A2:1347 [U] 0.0
Ac:157 [MET] A2:1385 [C] 2.88 A2:1346 [G] 0.0
Ac:157 [MET] A2:1386 [G] 4.78 0.0
Ac:158 [ILE] A2:1385 [C] 4.22 A2:1346 [G] 0.0
Ac:158 [ILE] A2:1386 [G] 3.55 0.0
Ac:159 [HIS] A2:1385 [C] 3.5 A2:1346 [G] 0.0
Ac:159 [HIS] A2:1386 [G] 2.64 0.0
Ac:159 [HIS] A2:1483 [C] 3.93 sugar:BB 0.0
Ac:159 [HIS] A2:1484 [A] 3.14 0.0
Ac:159 [HIS] A2:1485 [A] 3.6 0.0
Ac:159 [HIS] A2:1486 [U] 3.99 A2:1342 [C] 0.0
Ac:160 [SER] A2:1386 [G] 3.18 0.0
Ac:160 [SER] A2:1387 [A] 2.3 0.0
Ac:160 [SER] A2:1389 [A] 3.34 base:BB 0.0
Ac:160 [SER] A2:1483 [C] 3.89 0.0
Ac:160 [SER] A2:1484 [A] 3.31 0.0
Ac:161 [GLY] A2:1389 [A] 3.38 0.0
Ac:161 [GLY] A2:1390 [C] 3.31 A2:1482 [G] 0.0
Ac:161 [GLY] A2:1482 [G] 4.19 A2:1390 [C] 0.0
Ac:161 [GLY] A2:1483 [C] 2.96 base:BB 0.0
Ac:161 [GLY] A2:1484 [A] 4.83 0.0
Ac:162 [ASP] A2:1389 [A] 4.98 0.0
Ac:162 [ASP] A2:1390 [C] 3.12 A2:1482 [G] base:BB 0.0
Ac:162 [ASP] A2:1391 [U] 3.1 A2:1481 [A] 0.0
Ac:162 [ASP] A2:1482 [G] 3.84 A2:1390 [C] 0.0
Ac:163 [PRO] A2:1389 [A] 4.37 0.0
Ac:163 [PRO] A2:1390 [C] 3.5 A2:1482 [G] 0.0
Ac:164 [VAL] A2:1483 [C] 4.9 0.0
Ac:166 [TYR] A2:1390 [C] 4.6 A2:1482 [G] 0.0
Ac:172 [VAL] A2:1336 [G] 3.67 A2:1493 [U] 0.0
Ac:172 [VAL] A2:1337 [C] 4.23 A2:1492 [G] 0.0
Ac:173 [ARG] A2:1335 [G] 4.89 A2:1497 [U] 0.0
Ac:174 [HIS] A2:1335 [G] 3.04 A2:1497 [U] 0.0
Ac:174 [HIS] A2:1336 [G] 3.45 A2:1493 [U] 0.0
Ac:174 [HIS] A2:1499 [A] 4.08 A2:1334 [U] 0.0
Ac:176 [LEU] A2:1500 [U] 3.46 0.0
Ac:176 [LEU] A2:1501 [G] 4.23 A2:1330 [U] 0.0
Ac:177 [LEU] A2:1501 [G] 4.41 A2:1330 [U] 0.0
Ac:178 [ARG] A2:610 [PSU] 4.69 A2:635 [A] 0.0
Ac:178 [ARG] A2:1501 [G] 3.44 A2:1330 [U] 0.0
Ac:178 [ARG] A2:1502 [C] 4.73 A2:1329 [OMG] 0.0
Ac:179 [GLN] A2:629 [A] 3.13 base:SC 0.0
Ac:179 [GLN] A2:1333 [A] 4.01 A2:1494 [C] 0.0
Ac:179 [GLN] A2:1501 [G] 3.34 A2:1330 [U] 0.0
Ac:180 [GLY] A2:1333 [A] 4.27 A2:1494 [C] 0.0
Ac:180 [GLY] A2:1500 [U] 4.02 0.0
Ac:180 [GLY] A2:1501 [G] 3.41 A2:1330 [U] 0.0
Ac:181 [VAL] A2:1334 [U] 2.76 A2:1499 [A] sugar:BB 0.0
Ac:181 [VAL] A2:1335 [G] 3.58 A2:1497 [U] 0.0
Ac:181 [VAL] A2:1499 [A] 4.29 A2:1334 [U] 0.0
Ac:181 [VAL] A2:1500 [U] 3.27 0.0
Ac:182 [LEU] A2:1334 [U] 5.0 A2:1499 [A] 0.0
Ac:182 [LEU] A2:1335 [G] 4.19 A2:1497 [U] 0.0
Ac:183 [GLY] A2:1335 [G] 3.15 A2:1497 [U] 0.0
Ac:183 [GLY] A2:1336 [G] 3.9 A2:1493 [U] 0.0
Ac:184 [ILE] A2:1335 [G] 4.99 A2:1497 [U] 0.0
Ac:184 [ILE] A2:1336 [G] 4.64 A2:1493 [U] 0.0
Ac:185 [LYS] A2:1336 [G] 3.21 A2:1493 [U] 0.0
Ac:185 [LYS] A2:1337 [C] 2.59 A2:1492 [G] 0.0
Ac:189 [MET] A2:1385 [C] 4.76 A2:1346 [G] 0.0
Ac:205 [PRO] A2:1389 [A] 3.83 0.0
Ac:205 [PRO] A2:1390 [C] 3.61 A2:1482 [G] 0.0
Ac:206 [ASP] A2:1388 [G] 3.18 base:SC 0.0
Ac:206 [ASP] A2:1389 [A] 4.14 0.0

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group100 7O7Z_Ac_A2 Ac: 40s ribosomal protein s3, Oryctolagus cuniculus (natural) A2: 18s rRNA, Oryctolagus cuniculus (natural) G1TNM3 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) Eukaryotic small subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
7K00_C_A 7O7Z_Ac_A2 0.75 0.91 2.03 0.19 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare
6S0X_c_a 7O7Z_Ac_A2 0.48 0.89 2.84 0.15 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare
4Y4O_1c_1a 7O7Z_Ac_A2 0.76 0.92 2.2 0.21 Ribosomal protein S3-C & Prokaryotic type KH domain (KH-domain type II) compare