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All interfaces > All interologs > Interface groups > group101 > 4Y4O_1e_1a vs 6S0X_e_a

Interface analysis


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Licorice
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RNA

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Licorice
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Common contacts -

4Y4O_1e
4Y4O_1a
6S0X_e
6S0X_a
Conserved?
1e:93 [PRO] 1a:6 [G] e:98 [PRO] a:7 [G] ✔
1e:129 [ILE] 1a:18 [C] e:134 [ILE] a:19 [C] ✔
1e:129 [ILE] 1a:1078 [U] e:134 [ILE] a:1089 [U] ✔
1e:129 [ILE] 1a:1079 [G] e:134 [ILE] a:1090 [G] ✔
1e:104 [ALA] 1a:8 [A] e:109 [GLY] a:9 [A] ✔
1e:92 [LYS] 1a:4 [U] e:97 [LYS] a:5 [A] ✔
1e:92 [LYS] 1a:6 [G] e:97 [LYS] a:7 [G] ✔
1e:92 [LYS] 1a:7 [G] e:97 [LYS] a:8 [G] ✔
1e:27 [ARG] 1a:1081 [G] e:32 [ARG] a:1092 [G] ✔
1e:84 [PHE] 1a:1078 [U] e:89 [TYR] a:1089 [U] ✔
1e:24 [ARG] 1a:15 [G] e:29 [ARG] a:16 [G] ✔
1e:85 [GLY] 1a:864 [A] e:90 [GLY] a:873 [A] ✔
1e:19 [MET] 1a:15 [G] e:24 [VAL] a:16 [G] ✔
1e:19 [MET] 1a:921 [U] e:24 [VAL] a:930 [U] ✔
1e:19 [MET] 1a:922 [G] e:24 [VAL] a:931 [G] ✔
1e:19 [MET] 1a:1396 [A] e:24 [VAL] a:1406 [A] ✔
1e:19 [MET] 1a:1398 [A] e:24 [VAL] a:1408 [A] ✔
1e:57 [LYS] 1a:1073 [U] e:62 [LYS] a:1084 [U] ✔
1e:21 [ALA] 1a:922 [G] e:26 [LYS] a:931 [G] ✔
1e:21 [ALA] 1a:923 [A] e:26 [LYS] a:932 [A] ✔
1e:127 [ASN] 1a:18 [C] e:132 [THR] a:19 [C] ✔
1e:127 [ASN] 1a:19 [C] e:132 [THR] a:20 [C] ✔
1e:17 [ALA] 1a:15 [G] e:22 [ALA] a:16 [G] ✔
1e:17 [ALA] 1a:16 [A] e:22 [ALA] a:17 [A] ✔
1e:17 [ALA] 1a:1081 [G] e:22 [ALA] a:1092 [G] ✔
1e:102 [ALA] 1a:8 [A] e:107 [ALA] a:9 [A] ✔
1e:120 [THR] 1a:7 [G] e:125 [SER] a:8 [G] ✔
1e:120 [THR] 1a:8 [A] e:125 [SER] a:9 [A] ✔
1e:126 [ARG] 1a:9 [G] e:131 [ASN] a:10 [G] ✔
1e:133 [TYR] 1a:1078 [U] e:138 [ARG] a:1089 [U] ✔
1e:121 [LYS] 1a:7 [G] e:126 [LYS] a:8 [G] ✔
1e:121 [LYS] 1a:8 [A] e:126 [LYS] a:9 [A] ✔
1e:121 [LYS] 1a:558 [G] e:126 [LYS] a:566 [G] ✔
1e:64 [ARG] 1a:1074 [G] e:69 [LYS] a:1085 [G] ✔
1e:64 [ARG] 1a:1075 [C] e:69 [LYS] a:1086 [U] ✔
1e:119 [LEU] 1a:6 [G] e:124 [LEU] a:7 [G] ✔
1e:119 [LEU] 1a:7 [G] e:124 [LEU] a:8 [G] ✔
1e:79 [GLU] 1a:4 [U] e:84 [THR] a:5 [A] ✔
1e:18 [ARG] 1a:921 [U] e:23 [LYS] a:930 [U] ✔
1e:18 [ARG] 1a:1081 [G] e:23 [LYS] a:1092 [G] ✔
1e:20 [GLN] 1a:921 [U] e:25 [VAL] a:930 [U] ✔
1e:20 [GLN] 1a:922 [G] e:25 [VAL] a:931 [G] ✔
1e:20 [GLN] 1a:1398 [A] e:25 [VAL] a:1408 [A] ✔
1e:86 [ALA] 1a:19 [C] e:91 [SER] a:20 [C] ✔
1e:86 [ALA] 1a:20 [U] e:91 [SER] a:21 [U] ✔
1e:86 [ALA] 1a:864 [A] e:91 [SER] a:873 [A] ✔
1e:123 [LEU] 1a:560 [U] e:128 [LEU] a:568 [A] ✔
1e:130 [ASN] 1a:1078 [U] e:135 [ASN] a:1089 [U] ✔
1e:103 [GLY] 1a:8 [A] e:108 [GLY] a:9 [A] ✔
1e:83 [GLU] 1a:863 [U] e:88 [ARG] a:872 [U] ✔
1e:60 [TYR] 1a:1074 [G] e:65 [GLU] a:1085 [G] ✔
1e:94 [ALA] 1a:6 [G] e:99 [ALA] a:7 [G] ✔
1e:122 [GLU] 1a:8 [A] e:127 [SER] a:9 [A] ✔
1e:122 [GLU] 1a:9 [G] e:127 [SER] a:10 [G] ✔
1e:47 [LYS] 1a:1077 [G] e:52 [LYS] a:1088 [G] ✔
1e:47 [LYS] 1a:1079 [G] e:52 [LYS] a:1090 [G] ✔
1e:47 [LYS] 1a:1080 [A] e:52 [LYS] a:1091 [A] ✔
1e:47 [LYS] 1a:1081 [G] e:52 [LYS] a:1092 [G] ✔
1e:16 [THR] 1a:1080 [A] e:21 [VAL] a:1091 [A] ✔
1e:16 [THR] 1a:1081 [G] e:21 [VAL] a:1092 [G] ✔
1e:125 [SER] 1a:19 [C] e:130 [SER] a:20 [C] ✔
1e:95 [ALA] 1a:5 [U] e:100 [ALA] a:6 [U] ✔
1e:27 [ARG] 1a:1071 [C] e:32 [ARG] a:1082 [C] ❌ 6S0X_e_a
1e:27 [ARG] 1a:1082 [G] e:32 [ARG] a:1093 [A] ❌ 6S0X_e_a
1e:24 [ARG] 1a:1396 [A] e:29 [ARG] a:1406 [A] ❌ 6S0X_e_a
1e:57 [LYS] 1a:1072 [G] e:62 [LYS] a:1083 [G] ❌ 6S0X_e_a
1e:21 [ALA] 1a:1398 [A] e:26 [LYS] a:1408 [A] ❌ 6S0X_e_a
1e:17 [ALA] 1a:1080 [A] e:22 [ALA] a:1091 [A] ❌ 6S0X_e_a
1e:101 [ILE] 1a:7 [G] e:106 [ILE] a:8 [G] ❌ 6S0X_e_a
1e:101 [ILE] 1a:8 [A] e:106 [ILE] a:9 [A] ❌ 6S0X_e_a
1e:126 [ARG] 1a:558 [G] e:131 [ASN] a:566 [G] ❌ 6S0X_e_a
1e:133 [TYR] 1a:1079 [G] e:138 [ARG] a:1090 [G] ❌ 6S0X_e_a
1e:121 [LYS] 1a:9 [G] e:126 [LYS] a:10 [G] ❌ 6S0X_e_a
1e:18 [ARG] 1a:15 [G] e:23 [LYS] a:16 [G] ❌ 6S0X_e_a
1e:18 [ARG] 1a:1071 [C] e:23 [LYS] a:1082 [C] ❌ 6S0X_e_a
1e:20 [GLN] 1a:923 [A] e:25 [VAL] a:932 [A] ❌ 6S0X_e_a
1e:123 [LEU] 1a:7 [G] e:128 [LEU] a:8 [G] ❌ 6S0X_e_a
1e:130 [ASN] 1a:18 [C] e:135 [ASN] a:19 [C] ❌ 6S0X_e_a
1e:130 [ASN] 1a:19 [C] e:135 [ASN] a:20 [C] ❌ 6S0X_e_a
1e:103 [GLY] 1a:9 [G] e:108 [GLY] a:10 [G] ❌ 6S0X_e_a
1e:60 [TYR] 1a:1073 [U] e:65 [GLU] a:1084 [U] ❌ 6S0X_e_a
1e:25 [ARG] 1a:1081 [G] e:30 [ARG] a:1092 [G] ❌ 6S0X_e_a
1e:16 [THR] 1a:16 [A] e:21 [VAL] a:17 [A] ❌ 6S0X_e_a
1e:125 [SER] 1a:18 [C] e:130 [SER] a:19 [C] ❌ 6S0X_e_a
1e:125 [SER] 1a:20 [U] e:130 [SER] a:21 [U] ❌ 6S0X_e_a
1e:95 [ALA] 1a:6 [G] e:100 [ALA] a:7 [G] ❌ 6S0X_e_a
1e:101 [ILE] 1a:6 [G] e:106 [ILE] a:7 [G] ❌ 4Y4O_1e_1a
1e:121 [LYS] 1a:560 [U] e:126 [LYS] a:568 [A] ❌ 4Y4O_1e_1a
1e:126 [ARG] 1a:19 [C] e:131 [ASN] a:20 [C] ❌ 4Y4O_1e_1a
1e:18 [ARG] 1a:1082 [G] e:23 [LYS] a:1093 [A] ❌ 4Y4O_1e_1a
1e:25 [ARG] 1a:1072 [G] e:30 [ARG] a:1083 [G] ❌ 4Y4O_1e_1a
1e:25 [ARG] 1a:1071 [C] e:30 [ARG] a:1082 [C] ❌ 4Y4O_1e_1a
1e:27 [ARG] 1a:1080 [A] e:32 [ARG] a:1091 [A] ❌ 4Y4O_1e_1a
1e:57 [LYS] 1a:1074 [G] e:62 [LYS] a:1085 [G] ❌ 4Y4O_1e_1a
1e:85 [GLY] 1a:863 [U] e:90 [GLY] a:872 [U] ❌ 4Y4O_1e_1a
1e:86 [ALA] 1a:18 [C] e:91 [SER] a:19 [C] ❌ 4Y4O_1e_1a
1e:92 [LYS] 1a:5 [U] e:97 [LYS] a:6 [U] ❌ 4Y4O_1e_1a
1e:93 [PRO] 1a:4 [U] e:98 [PRO] a:5 [A] ❌ 4Y4O_1e_1a
1e:24 [ARG] 1a:1397 [C] e:29 [ARG] a:1407 [C] ❌ 6S0X_a:1407 no longer at interface
1e:19 [MET] 1a:1397 [C] e:24 [VAL] a:1407 [C] ❌ 6S0X_a:1407 no longer at interface
1e:14 [ARG] 1a:17 [U] e:19 [ASN] a:18 [U] ❌ 6S0X_e:19, 6S0X_a:18 no longer at interface
1e:127 [ASN] 1a:17 [U] e:132 [THR] a:18 [U] ❌ 6S0X_a:18 no longer at interface
1e:126 [ARG] 1a:10 [A] e:131 [ASN] a:11 [A] ❌ 6S0X_a:11 no longer at interface
1e:126 [ARG] 1a:559 [A] e:131 [ASN] a:567 [A] ❌ 6S0X_a:567 no longer at interface
1e:121 [LYS] 1a:559 [A] e:126 [LYS] a:567 [A] ❌ 6S0X_a:567 no longer at interface
1e:18 [ARG] 1a:1070 [U] e:23 [LYS] a:1081 [U] ❌ 6S0X_a:1081 no longer at interface
1e:20 [GLN] 1a:1069 [C] e:25 [VAL] a:1080 [C] ❌ 6S0X_a:1080 no longer at interface
1e:20 [GLN] 1a:1070 [U] e:25 [VAL] a:1081 [U] ❌ 6S0X_a:1081 no longer at interface
1e:122 [GLU] 1a:10 [A] e:127 [SER] a:11 [A] ❌ 6S0X_a:11 no longer at interface
1e:25 [ARG] 1a:1069 [C] e:30 [ARG] a:1080 [C] ❌ 6S0X_a:1080 no longer at interface
1e:25 [ARG] 1a:1070 [U] e:30 [ARG] a:1081 [U] ❌ 6S0X_a:1081 no longer at interface
1e:25 [ARG] 1a:1192 [C] e:30 [ARG] a:1202 [C] ❌ 6S0X_a:1202 no longer at interface
1e:25 [ARG] 1a:1193 [G] e:30 [ARG] a:1203 [G] ❌ 6S0X_a:1203 no longer at interface
1e:16 [THR] 1a:17 [U] e:21 [VAL] a:18 [U] ❌ 6S0X_a:18 no longer at interface
1e:15 [ARG] 1a:17 [U] e:20 [ARG] a:18 [U] ❌ 6S0X_e:20, 6S0X_a:18 no longer at interface
1e:22 [GLY] 1a:1194 [U] e:27 [GLY] a:1204 [U] ❌ 6S0X_e:27, 6S0X_a:1204 no longer at interface
1e:22 [GLY] 1a:1195 [C] e:27 [GLY] a:1205 [C] ❌ 6S0X_e:27, 6S0X_a:1205 no longer at interface
1e:21 [ALA] 1a:1388 [C] e:26 [LYS] a:1398 [U] ❌ 4Y4O_1a:1388 no longer at interface
1e:98 [THR] 1a:6 [G] e:103 [THR] a:7 [G] ❌ 6S0X_e:103 no longer at interface
1e:61 [TYR] 1a:1074 [G] e:66 [ALA] a:1085 [G] ❌ 6S0X_e:66 no longer at interface
1e:107 [ARG] 1a:8 [A] e:112 [ARG] a:9 [A] ❌ 6S0X_e:112 no longer at interface
1e:14 [ARG] 1a:18 [C] e:19 [ASN] a:19 [C] ❌ 6S0X_e:19 no longer at interface
1e:14 [ARG] 1a:1079 [G] e:19 [ASN] a:1090 [G] ❌ 6S0X_e:19 no longer at interface
1e:14 [ARG] 1a:1080 [A] e:19 [ASN] a:1091 [A] ❌ 6S0X_e:19 no longer at interface
1e:124 [GLY] 1a:20 [U] e:129 [GLY] a:21 [U] ❌ 6S0X_e:129 no longer at interface
1e:48 [ALA] 1a:1072 [G] e:53 [ALA] a:1083 [G] ❌ 6S0X_e:53 no longer at interface
1e:87 [SER] 1a:19 [C] e:92 [GLY] a:20 [C] ❌ 6S0X_e:92 no longer at interface
1e:23 [GLY] 1a:1398 [A] e:28 [GLY] a:1408 [A] ❌ 6S0X_e:28 no longer at interface
1e:15 [ARG] 1a:16 [A] e:20 [ARG] a:17 [A] ❌ 6S0X_e:20 no longer at interface
1e:90 [VAL] 1a:7 [G] e:95 [PHE] a:8 [G] ❌ 6S0X_e:95 no longer at interface
1e:53 [LEU] 1a:1072 [G] e:57 [PRO] a:1083 [G] ❌ 6S0X_e:57 no longer at interface
1e:22 [GLY] 1a:1398 [A] e:27 [GLY] a:1408 [A] ❌ 6S0X_e:27 no longer at interface
1e:45 [PHE] 1a:1079 [G] e:50 [THR] a:1090 [G] ❌ 6S0X_e:50 no longer at interface
1e:45 [PHE] 1a:1080 [A] e:50 [THR] a:1091 [A] ❌ 6S0X_e:50 no longer at interface
1e:106 [PRO] 1a:8 [A] e:111 [VAL] a:9 [A] ❌ 4Y4O_1e:106 no longer at interface
1e:118 [ILE] 1a:6 [G] e:123 [ILE] a:7 [G] ❌ 4Y4O_1e:118 no longer at interface
1e:50 [GLU] 1a:1072 [G] e:54 [GLN] a:1083 [G] ❌ 4Y4O_1e:50 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA 0.96 2.62 0.50 0.89 0.95 0.93 0.97 0.59 0.50 0.11 0.52


Other pairs involving 4Y4O_1e_1a or 6S0X_e_a

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1e_1a 6S0X_e_a 0.59 0.96 2.62 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7K00_E_A 0.83 0.98 0.91 0.44 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7RYG_e_a 0.81 0.92 2.08 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7O7Y_Ab_A2 0.67 0.93 1.93 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
4Y4O_1e_1a 7O7Z_Ab_A2 0.67 0.93 1.9 0.16 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
6S0X_e_a 7O7Y_Ab_A2 0.44 0.89 2.76 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
6S0X_e_a 7RYG_e_a 0.59 0.97 1.64 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
6S0X_e_a 7K00_E_A 0.57 0.96 2.44 0.47 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
6S0X_e_a 7O7Z_Ab_A2 0.44 0.89 2.76 0.2 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare