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All interfaces > All interologs > Interface groups > group101 > 4Y4O_1e_1a vs 7K00_E_A

Interface analysis


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Licorice
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Licorice
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Common contacts -

4Y4O_1e
4Y4O_1a
7K00_E
7K00_A
Conserved?
1e:93 [PRO] 1a:6 [G] E:98 [PRO] A:6 [G] ✔
1e:129 [ILE] 1a:1078 [U] E:134 [ILE] A:1078 [U] ✔
1e:129 [ILE] 1a:1079 [G] E:134 [ILE] A:1079 [G] ✔
1e:92 [LYS] 1a:6 [G] E:97 [GLN] A:6 [G] ✔
1e:92 [LYS] 1a:7 [G] E:97 [GLN] A:7 [A] ✔
1e:27 [ARG] 1a:1081 [G] E:32 [SER] A:1081 [A] ✔
1e:84 [PHE] 1a:1078 [U] E:89 [HIS] A:1078 [U] ✔
1e:24 [ARG] 1a:15 [G] E:29 [ARG] A:15 [G] ✔
1e:24 [ARG] 1a:1396 [A] E:29 [ARG] A:1396 [A] ✔
1e:24 [ARG] 1a:1397 [C] E:29 [ARG] A:1397 [C] ✔
1e:98 [THR] 1a:6 [G] E:103 [THR] A:6 [G] ✔
1e:85 [GLY] 1a:864 [A] E:90 [THR] A:864 [A] ✔
1e:61 [TYR] 1a:1074 [G] E:66 [LYS] A:1074 [G] ✔
1e:107 [ARG] 1a:8 [A] E:112 [ARG] A:8 [A] ✔
1e:19 [MET] 1a:15 [G] E:24 [THR] A:15 [G] ✔
1e:19 [MET] 1a:921 [U] E:24 [THR] A:921 [U] ✔
1e:19 [MET] 1a:922 [G] E:24 [THR] A:922 [G] ✔
1e:19 [MET] 1a:1396 [A] E:24 [THR] A:1396 [A] ✔
1e:19 [MET] 1a:1398 [A] E:24 [THR] A:1398 [A] ✔
1e:57 [LYS] 1a:1072 [G] E:62 [LYS] A:1072 [G] ✔
1e:57 [LYS] 1a:1073 [U] E:62 [LYS] A:1073 [U] ✔
1e:14 [ARG] 1a:17 [U] E:19 [ASN] A:17 [U] ✔
1e:21 [ALA] 1a:922 [G] E:26 [LYS] A:922 [G] ✔
1e:21 [ALA] 1a:923 [A] E:26 [LYS] A:923 [A] ✔
1e:21 [ALA] 1a:1398 [A] E:26 [LYS] A:1398 [A] ✔
1e:127 [ASN] 1a:17 [U] E:132 [ASN] A:17 [U] ✔
1e:127 [ASN] 1a:18 [C] E:132 [ASN] A:18 [C] ✔
1e:127 [ASN] 1a:19 [C] E:132 [ASN] A:19 [A] ✔
1e:17 [ALA] 1a:15 [G] E:22 [SER] A:15 [G] ✔
1e:17 [ALA] 1a:16 [A] E:22 [SER] A:16 [A] ✔
1e:17 [ALA] 1a:1080 [A] E:22 [SER] A:1080 [A] ✔
1e:17 [ALA] 1a:1081 [G] E:22 [SER] A:1081 [A] ✔
1e:102 [ALA] 1a:8 [A] E:107 [ALA] A:8 [A] ✔
1e:101 [ILE] 1a:7 [G] E:106 [ILE] A:7 [A] ✔
1e:101 [ILE] 1a:8 [A] E:106 [ILE] A:8 [A] ✔
1e:120 [THR] 1a:7 [G] E:125 [ALA] A:7 [A] ✔
1e:120 [THR] 1a:8 [A] E:125 [ALA] A:8 [A] ✔
1e:126 [ARG] 1a:9 [G] E:131 [THR] A:9 [G] ✔
1e:126 [ARG] 1a:10 [A] E:131 [THR] A:10 [A] ✔
1e:133 [TYR] 1a:1078 [U] E:138 [ARG] A:1078 [U] ✔
1e:133 [TYR] 1a:1079 [G] E:138 [ARG] A:1079 [G] ✔
1e:121 [LYS] 1a:7 [G] E:126 [LYS] A:7 [A] ✔
1e:121 [LYS] 1a:8 [A] E:126 [LYS] A:8 [A] ✔
1e:121 [LYS] 1a:9 [G] E:126 [LYS] A:9 [G] ✔
1e:121 [LYS] 1a:558 [G] E:126 [LYS] A:558 [G] ✔
1e:121 [LYS] 1a:559 [A] E:126 [LYS] A:559 [A] ✔
1e:64 [ARG] 1a:1074 [G] E:69 [ARG] A:1074 [G] ✔
1e:64 [ARG] 1a:1075 [C] E:69 [ARG] A:1075 [U] ✔
1e:119 [LEU] 1a:6 [G] E:124 [LEU] A:6 [G] ✔
1e:119 [LEU] 1a:7 [G] E:124 [LEU] A:7 [A] ✔
1e:18 [ARG] 1a:15 [G] E:23 [LYS] A:15 [G] ✔
1e:18 [ARG] 1a:921 [U] E:23 [LYS] A:921 [U] ✔
1e:18 [ARG] 1a:1081 [G] E:23 [LYS] A:1081 [A] ✔
1e:49 [PRO] 1a:1071 [C] E:54 [ARG] A:1071 [C] ✔
1e:20 [GLN] 1a:921 [U] E:25 [VAL] A:921 [U] ✔
1e:20 [GLN] 1a:922 [G] E:25 [VAL] A:922 [G] ✔
1e:20 [GLN] 1a:923 [A] E:25 [VAL] A:923 [A] ✔
1e:20 [GLN] 1a:1070 [U] E:25 [VAL] A:1070 [U] ✔
1e:20 [GLN] 1a:1398 [A] E:25 [VAL] A:1398 [A] ✔
1e:86 [ALA] 1a:19 [C] E:91 [GLY] A:19 [A] ✔
1e:86 [ALA] 1a:20 [U] E:91 [GLY] A:20 [U] ✔
1e:86 [ALA] 1a:864 [A] E:91 [GLY] A:864 [A] ✔
1e:123 [LEU] 1a:7 [G] E:128 [TYR] A:7 [A] ✔
1e:123 [LEU] 1a:560 [U] E:128 [TYR] A:560 [A] ✔
1e:87 [SER] 1a:19 [C] E:92 [SER] A:19 [A] ✔
1e:130 [ASN] 1a:18 [C] E:135 [ASN] A:18 [C] ✔
1e:130 [ASN] 1a:19 [C] E:135 [ASN] A:19 [A] ✔
1e:130 [ASN] 1a:1078 [U] E:135 [ASN] A:1078 [U] ✔
1e:103 [GLY] 1a:8 [A] E:108 [GLY] A:8 [A] ✔
1e:103 [GLY] 1a:9 [G] E:108 [GLY] A:9 [G] ✔
1e:60 [TYR] 1a:1073 [U] E:65 [GLU] A:1073 [U] ✔
1e:94 [ALA] 1a:6 [G] E:99 [ALA] A:6 [G] ✔
1e:122 [GLU] 1a:9 [G] E:127 [ALA] A:9 [G] ✔
1e:47 [LYS] 1a:1080 [A] E:52 [LYS] A:1080 [A] ✔
1e:47 [LYS] 1a:1081 [G] E:52 [LYS] A:1081 [A] ✔
1e:25 [ARG] 1a:1070 [U] E:30 [ILE] A:1070 [U] ✔
1e:25 [ARG] 1a:1081 [G] E:30 [ILE] A:1081 [A] ✔
1e:16 [THR] 1a:16 [A] E:21 [VAL] A:16 [A] ✔
1e:16 [THR] 1a:17 [U] E:21 [VAL] A:17 [U] ✔
1e:16 [THR] 1a:1080 [A] E:21 [VAL] A:1080 [A] ✔
1e:16 [THR] 1a:1081 [G] E:21 [VAL] A:1081 [A] ✔
1e:23 [GLY] 1a:1398 [A] E:28 [GLY] A:1398 [A] ✔
1e:125 [SER] 1a:18 [C] E:130 [SER] A:18 [C] ✔
1e:125 [SER] 1a:19 [C] E:130 [SER] A:19 [A] ✔
1e:125 [SER] 1a:20 [U] E:130 [SER] A:20 [U] ✔
1e:95 [ALA] 1a:5 [U] E:100 [SER] A:5 [U] ✔
1e:95 [ALA] 1a:6 [G] E:100 [SER] A:6 [G] ✔
1e:15 [ARG] 1a:16 [A] E:20 [ARG] A:16 [A] ✔
1e:15 [ARG] 1a:17 [U] E:20 [ARG] A:17 [U] ✔
1e:90 [VAL] 1a:7 [G] E:95 [PHE] A:7 [A] ✔
1e:22 [GLY] 1a:1194 [U] E:27 [GLY] A:1194 [U] ✔
1e:22 [GLY] 1a:1398 [A] E:27 [GLY] A:1398 [A] ✔
1e:45 [PHE] 1a:1079 [G] E:50 [TYR] A:1079 [G] ✔
1e:45 [PHE] 1a:1080 [A] E:50 [TYR] A:1080 [A] ✔
1e:129 [ILE] 1a:18 [C] E:134 [ILE] A:18 [C] ❌ 7K00_E_A
1e:27 [ARG] 1a:1071 [C] E:32 [SER] A:1071 [C] ❌ 7K00_E_A
1e:27 [ARG] 1a:1082 [G] E:32 [SER] A:1082 [A] ❌ 7K00_E_A
1e:19 [MET] 1a:1397 [C] E:24 [THR] A:1397 [C] ❌ 7K00_E_A
1e:14 [ARG] 1a:18 [C] E:19 [ASN] A:18 [C] ❌ 7K00_E_A
1e:14 [ARG] 1a:1079 [G] E:19 [ASN] A:1079 [G] ❌ 7K00_E_A
1e:14 [ARG] 1a:1080 [A] E:19 [ASN] A:1080 [A] ❌ 7K00_E_A
1e:124 [GLY] 1a:20 [U] E:129 [GLY] A:20 [U] ❌ 7K00_E_A
1e:126 [ARG] 1a:558 [G] E:131 [THR] A:558 [G] ❌ 7K00_E_A
1e:126 [ARG] 1a:559 [A] E:131 [THR] A:559 [A] ❌ 7K00_E_A
1e:18 [ARG] 1a:1070 [U] E:23 [LYS] A:1070 [U] ❌ 7K00_E_A
1e:18 [ARG] 1a:1071 [C] E:23 [LYS] A:1071 [C] ❌ 7K00_E_A
1e:49 [PRO] 1a:1072 [G] E:54 [ARG] A:1072 [G] ❌ 7K00_E_A
1e:60 [TYR] 1a:1074 [G] E:65 [GLU] A:1074 [G] ❌ 7K00_E_A
1e:122 [GLU] 1a:8 [A] E:127 [ALA] A:8 [A] ❌ 7K00_E_A
1e:122 [GLU] 1a:10 [A] E:127 [ALA] A:10 [A] ❌ 7K00_E_A
1e:47 [LYS] 1a:1079 [G] E:52 [LYS] A:1079 [G] ❌ 7K00_E_A
1e:25 [ARG] 1a:1193 [G] E:30 [ILE] A:1193 [G] ❌ 7K00_E_A
1e:98 [THR] 1a:7 [G] E:103 [THR] A:7 [A] ❌ 4Y4O_1e_1a
1e:120 [THR] 1a:9 [G] E:125 [ALA] A:9 [G] ❌ 4Y4O_1e_1a
1e:122 [GLU] 1a:559 [A] E:127 [ALA] A:559 [A] ❌ 4Y4O_1e_1a
1e:124 [GLY] 1a:560 [U] E:129 [GLY] A:560 [A] ❌ 4Y4O_1e_1a
1e:14 [ARG] 1a:16 [A] E:19 [ASN] A:16 [A] ❌ 4Y4O_1e_1a
1e:18 [ARG] 1a:1082 [G] E:23 [LYS] A:1082 [A] ❌ 4Y4O_1e_1a
1e:18 [ARG] 1a:922 [G] E:23 [LYS] A:922 [G] ❌ 4Y4O_1e_1a
1e:18 [ARG] 1a:1080 [A] E:23 [LYS] A:1080 [A] ❌ 4Y4O_1e_1a
1e:22 [GLY] 1a:1193 [G] E:27 [GLY] A:1193 [G] ❌ 4Y4O_1e_1a
1e:49 [PRO] 1a:1070 [U] E:54 [ARG] A:1070 [U] ❌ 4Y4O_1e_1a
1e:85 [GLY] 1a:18 [C] E:90 [THR] A:18 [C] ❌ 4Y4O_1e_1a
1e:85 [GLY] 1a:1078 [U] E:90 [THR] A:1078 [U] ❌ 4Y4O_1e_1a
1e:85 [GLY] 1a:19 [C] E:90 [THR] A:19 [A] ❌ 4Y4O_1e_1a
1e:92 [LYS] 1a:4 [U] E:97 [GLN] A:4 [U] ❌ 7K00_A:4 no longer at interface
1e:79 [GLU] 1a:4 [U] E:84 [PRO] A:4 [U] ❌ 7K00_E:84, 7K00_A:4 no longer at interface
1e:20 [GLN] 1a:1069 [C] E:25 [VAL] A:1069 [C] ❌ 7K00_A:1069 no longer at interface
1e:83 [GLU] 1a:863 [U] E:88 [VAL] A:863 [U] ❌ 7K00_E:88, 7K00_A:863 no longer at interface
1e:47 [LYS] 1a:1077 [G] E:52 [LYS] A:1077 [G] ❌ 7K00_A:1077 no longer at interface
1e:25 [ARG] 1a:1069 [C] E:30 [ILE] A:1069 [C] ❌ 7K00_A:1069 no longer at interface
1e:25 [ARG] 1a:1192 [C] E:30 [ILE] A:1192 [C] ❌ 7K00_A:1192 no longer at interface
1e:22 [GLY] 1a:1195 [C] E:27 [GLY] A:1195 [C] ❌ 7K00_A:1195 no longer at interface
1e:123 [LEU] 1a:298 [A] E:128 [TYR] A:298 [A] ❌ 4Y4O_1a:298 no longer at interface
1e:21 [ALA] 1a:924 [C] E:26 [LYS] A:924 [C] ❌ 4Y4O_1a:924 no longer at interface
1e:81 [GLU] 1a:566 [G] E:86 [LYS] A:566 [G] ❌ 4Y4O_1e:81, 4Y4O_1a:566 no longer at interface
1e:85 [GLY] 1a:865 [A] E:90 [THR] A:865 [A] ❌ 4Y4O_1a:865 no longer at interface
1e:104 [ALA] 1a:8 [A] E:109 [GLY] A:8 [A] ❌ 7K00_E:109 no longer at interface
1e:48 [ALA] 1a:1072 [G] E:53 [ALA] A:1072 [G] ❌ 7K00_E:53 no longer at interface
1e:53 [LEU] 1a:1072 [G] E:58 [ALA] A:1072 [G] ❌ 7K00_E:58 no longer at interface
1e:26 [PHE] 1a:15 [G] E:31 [PHE] A:15 [G] ❌ 4Y4O_1e:26 no longer at interface
1e:29 [GLY] 1a:1080 [A] E:34 [THR] A:1080 [A] ❌ 4Y4O_1e:29 no longer at interface
1e:88 [LYS] 1a:560 [U] E:93 [ARG] A:560 [A] ❌ 4Y4O_1e:88 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA 0.98 0.91 0.44 0.96 0.98 0.92 0.9 0.83 0.82 0.37 0.37


Other pairs involving 4Y4O_1e_1a or 7K00_E_A

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0X_e_a 7K00_E_A 0.57 0.96 2.44 0.47 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
7K00_E_A 7O7Z_Ab_A2 0.73 0.92 1.74 0.16 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
7K00_E_A 7O7Y_Ab_A2 0.73 0.92 1.76 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
7K00_E_A 7RYG_e_a 0.91 0.94 1.67 0.75 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 6S0X_e_a 0.59 0.96 2.62 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7K00_E_A 0.83 0.98 0.91 0.44 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7RYG_e_a 0.81 0.92 2.08 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7O7Y_Ab_A2 0.67 0.93 1.93 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
4Y4O_1e_1a 7O7Z_Ab_A2 0.67 0.93 1.9 0.16 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare