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All interfaces > All interologs > Interface groups > group101 > 4Y4O_1e_1a vs 7RYG_e_a

Interface analysis


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Licorice
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RNA

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Licorice
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Common contacts -

4Y4O_1e
4Y4O_1a
7RYG_e
7RYG_a
Conserved?
1e:93 [PRO] 1a:6 [G] e:97 [PRO] a:8 [G] ✔
1e:129 [ILE] 1a:1078 [U] e:133 [ALA] a:1075 [U] ✔
1e:92 [LYS] 1a:6 [G] e:96 [GLN] a:8 [G] ✔
1e:92 [LYS] 1a:7 [G] e:96 [GLN] a:9 [A] ✔
1e:27 [ARG] 1a:1081 [G] e:31 [SER] a:1078 [G] ✔
1e:84 [PHE] 1a:1078 [U] e:88 [HIS] a:1075 [U] ✔
1e:24 [ARG] 1a:15 [G] e:28 [ARG] a:17 [G] ✔
1e:24 [ARG] 1a:1396 [A] e:28 [ARG] a:1393 [A] ✔
1e:24 [ARG] 1a:1397 [C] e:28 [ARG] a:1394 [C] ✔
1e:98 [THR] 1a:6 [G] e:102 [THR] a:8 [G] ✔
1e:85 [GLY] 1a:864 [A] e:89 [GLY] a:861 [A] ✔
1e:107 [ARG] 1a:8 [A] e:111 [ARG] a:10 [A] ✔
1e:19 [MET] 1a:15 [G] e:23 [VAL] a:17 [G] ✔
1e:19 [MET] 1a:921 [U] e:23 [VAL] a:918 [U] ✔
1e:19 [MET] 1a:922 [G] e:23 [VAL] a:919 [G] ✔
1e:19 [MET] 1a:1396 [A] e:23 [VAL] a:1393 [A] ✔
1e:19 [MET] 1a:1398 [A] e:23 [VAL] a:1395 [A] ✔
1e:57 [LYS] 1a:1073 [U] e:61 [LYS] a:1070 [U] ✔
1e:14 [ARG] 1a:17 [U] e:18 [ASP] a:19 [U] ✔
1e:21 [ALA] 1a:922 [G] e:25 [LYS] a:919 [G] ✔
1e:21 [ALA] 1a:923 [A] e:25 [LYS] a:920 [A] ✔
1e:21 [ALA] 1a:1398 [A] e:25 [LYS] a:1395 [A] ✔
1e:127 [ASN] 1a:18 [C] e:131 [ASN] a:20 [C] ✔
1e:127 [ASN] 1a:19 [C] e:131 [ASN] a:21 [A] ✔
1e:17 [ALA] 1a:15 [G] e:21 [ALA] a:17 [G] ✔
1e:17 [ALA] 1a:16 [A] e:21 [ALA] a:18 [A] ✔
1e:17 [ALA] 1a:1080 [A] e:21 [ALA] a:1077 [A] ✔
1e:17 [ALA] 1a:1081 [G] e:21 [ALA] a:1078 [G] ✔
1e:102 [ALA] 1a:8 [A] e:106 [ALA] a:10 [A] ✔
1e:101 [ILE] 1a:7 [G] e:105 [ILE] a:9 [A] ✔
1e:101 [ILE] 1a:8 [A] e:105 [ILE] a:10 [A] ✔
1e:120 [THR] 1a:7 [G] e:124 [ALA] a:9 [A] ✔
1e:120 [THR] 1a:8 [A] e:124 [ALA] a:10 [A] ✔
1e:126 [ARG] 1a:9 [G] e:130 [THR] a:11 [G] ✔
1e:126 [ARG] 1a:10 [A] e:130 [THR] a:12 [A] ✔
1e:133 [TYR] 1a:1078 [U] e:137 [ASN] a:1075 [U] ✔
1e:121 [LYS] 1a:7 [G] e:125 [LYS] a:9 [A] ✔
1e:121 [LYS] 1a:8 [A] e:125 [LYS] a:10 [A] ✔
1e:121 [LYS] 1a:9 [G] e:125 [LYS] a:11 [G] ✔
1e:121 [LYS] 1a:559 [A] e:125 [LYS] a:556 [A] ✔
1e:64 [ARG] 1a:1074 [G] e:68 [ARG] a:1071 [G] ✔
1e:64 [ARG] 1a:1075 [C] e:68 [ARG] a:1072 [U] ✔
1e:119 [LEU] 1a:6 [G] e:123 [LEU] a:8 [G] ✔
1e:119 [LEU] 1a:7 [G] e:123 [LEU] a:9 [A] ✔
1e:18 [ARG] 1a:15 [G] e:22 [LYS] a:17 [G] ✔
1e:18 [ARG] 1a:921 [U] e:22 [LYS] a:918 [U] ✔
1e:18 [ARG] 1a:1081 [G] e:22 [LYS] a:1078 [G] ✔
1e:49 [PRO] 1a:1071 [C] e:53 [ARG] a:1068 [C] ✔
1e:20 [GLN] 1a:921 [U] e:24 [VAL] a:918 [U] ✔
1e:20 [GLN] 1a:922 [G] e:24 [VAL] a:919 [G] ✔
1e:20 [GLN] 1a:1070 [U] e:24 [VAL] a:1067 [U] ✔
1e:20 [GLN] 1a:1398 [A] e:24 [VAL] a:1395 [A] ✔
1e:86 [ALA] 1a:19 [C] e:90 [ALA] a:21 [A] ✔
1e:86 [ALA] 1a:20 [U] e:90 [ALA] a:22 [U] ✔
1e:86 [ALA] 1a:864 [A] e:90 [ALA] a:861 [A] ✔
1e:123 [LEU] 1a:7 [G] e:127 [TYR] a:9 [A] ✔
1e:123 [LEU] 1a:560 [U] e:127 [TYR] a:557 [U] ✔
1e:87 [SER] 1a:19 [C] e:91 [SER] a:21 [A] ✔
1e:130 [ASN] 1a:18 [C] e:134 [ASN] a:20 [C] ✔
1e:130 [ASN] 1a:19 [C] e:134 [ASN] a:21 [A] ✔
1e:130 [ASN] 1a:1078 [U] e:134 [ASN] a:1075 [U] ✔
1e:103 [GLY] 1a:8 [A] e:107 [GLY] a:10 [A] ✔
1e:103 [GLY] 1a:9 [G] e:107 [GLY] a:11 [G] ✔
1e:83 [GLU] 1a:863 [U] e:87 [ARG] a:860 [U] ✔
1e:94 [ALA] 1a:6 [G] e:98 [ALA] a:8 [G] ✔
1e:122 [GLU] 1a:9 [G] e:126 [CYS] a:11 [G] ✔
1e:47 [LYS] 1a:1080 [A] e:51 [LYS] a:1077 [A] ✔
1e:47 [LYS] 1a:1081 [G] e:51 [LYS] a:1078 [G] ✔
1e:25 [ARG] 1a:1081 [G] e:29 [ILE] a:1078 [G] ✔
1e:16 [THR] 1a:16 [A] e:20 [VAL] a:18 [A] ✔
1e:16 [THR] 1a:17 [U] e:20 [VAL] a:19 [U] ✔
1e:16 [THR] 1a:1080 [A] e:20 [VAL] a:1077 [A] ✔
1e:16 [THR] 1a:1081 [G] e:20 [VAL] a:1078 [G] ✔
1e:23 [GLY] 1a:1398 [A] e:27 [GLY] a:1395 [A] ✔
1e:125 [SER] 1a:19 [C] e:129 [SER] a:21 [A] ✔
1e:125 [SER] 1a:20 [U] e:129 [SER] a:22 [U] ✔
1e:95 [ALA] 1a:5 [U] e:99 [SER] a:7 [U] ✔
1e:95 [ALA] 1a:6 [G] e:99 [SER] a:8 [G] ✔
1e:15 [ARG] 1a:16 [A] e:19 [ARG] a:18 [A] ✔
1e:15 [ARG] 1a:17 [U] e:19 [ARG] a:19 [U] ✔
1e:90 [VAL] 1a:7 [G] e:94 [TYR] a:9 [A] ✔
1e:22 [GLY] 1a:1194 [U] e:26 [GLY] a:1191 [U] ✔
1e:22 [GLY] 1a:1398 [A] e:26 [GLY] a:1395 [A] ✔
1e:45 [PHE] 1a:1079 [G] e:49 [ARG] a:1076 [G] ✔
1e:45 [PHE] 1a:1080 [A] e:49 [ARG] a:1077 [A] ✔
1e:129 [ILE] 1a:18 [C] e:133 [ALA] a:20 [C] ❌ 7RYG_e_a
1e:129 [ILE] 1a:1079 [G] e:133 [ALA] a:1076 [G] ❌ 7RYG_e_a
1e:27 [ARG] 1a:1071 [C] e:31 [SER] a:1068 [C] ❌ 7RYG_e_a
1e:27 [ARG] 1a:1082 [G] e:31 [SER] a:1079 [A] ❌ 7RYG_e_a
1e:19 [MET] 1a:1397 [C] e:23 [VAL] a:1394 [C] ❌ 7RYG_e_a
1e:14 [ARG] 1a:18 [C] e:18 [ASP] a:20 [C] ❌ 7RYG_e_a
1e:14 [ARG] 1a:1079 [G] e:18 [ASP] a:1076 [G] ❌ 7RYG_e_a
1e:14 [ARG] 1a:1080 [A] e:18 [ASP] a:1077 [A] ❌ 7RYG_e_a
1e:127 [ASN] 1a:17 [U] e:131 [ASN] a:19 [U] ❌ 7RYG_e_a
1e:124 [GLY] 1a:20 [U] e:128 [GLY] a:22 [U] ❌ 7RYG_e_a
1e:126 [ARG] 1a:559 [A] e:130 [THR] a:556 [A] ❌ 7RYG_e_a
1e:133 [TYR] 1a:1079 [G] e:137 [ASN] a:1076 [G] ❌ 7RYG_e_a
1e:18 [ARG] 1a:1070 [U] e:22 [LYS] a:1067 [U] ❌ 7RYG_e_a
1e:18 [ARG] 1a:1071 [C] e:22 [LYS] a:1068 [C] ❌ 7RYG_e_a
1e:20 [GLN] 1a:923 [A] e:24 [VAL] a:920 [A] ❌ 7RYG_e_a
1e:122 [GLU] 1a:8 [A] e:126 [CYS] a:10 [A] ❌ 7RYG_e_a
1e:122 [GLU] 1a:10 [A] e:126 [CYS] a:12 [A] ❌ 7RYG_e_a
1e:47 [LYS] 1a:1079 [G] e:51 [LYS] a:1076 [G] ❌ 7RYG_e_a
1e:25 [ARG] 1a:1070 [U] e:29 [ILE] a:1067 [U] ❌ 7RYG_e_a
1e:25 [ARG] 1a:1193 [G] e:29 [ILE] a:1190 [G] ❌ 7RYG_e_a
1e:125 [SER] 1a:18 [C] e:129 [SER] a:20 [C] ❌ 7RYG_e_a
1e:98 [THR] 1a:7 [G] e:102 [THR] a:9 [A] ❌ 4Y4O_1e_1a
1e:102 [ALA] 1a:9 [G] e:106 [ALA] a:11 [G] ❌ 4Y4O_1e_1a
1e:120 [THR] 1a:9 [G] e:124 [ALA] a:11 [G] ❌ 4Y4O_1e_1a
1e:124 [GLY] 1a:560 [U] e:128 [GLY] a:557 [U] ❌ 4Y4O_1e_1a
1e:127 [ASN] 1a:1078 [U] e:131 [ASN] a:1075 [U] ❌ 4Y4O_1e_1a
1e:18 [ARG] 1a:1082 [G] e:22 [LYS] a:1079 [A] ❌ 4Y4O_1e_1a
1e:21 [ALA] 1a:1193 [G] e:25 [LYS] a:1190 [G] ❌ 4Y4O_1e_1a
1e:22 [GLY] 1a:1193 [G] e:26 [GLY] a:1190 [G] ❌ 4Y4O_1e_1a
1e:49 [PRO] 1a:1070 [U] e:53 [ARG] a:1067 [U] ❌ 4Y4O_1e_1a
1e:92 [LYS] 1a:4 [U] e:96 [GLN] a:6 [C] ❌ 7RYG_a:6 no longer at interface
1e:57 [LYS] 1a:1072 [G] e:61 [LYS] a:1069 [G] ❌ 7RYG_a:1069 no longer at interface
1e:126 [ARG] 1a:558 [G] e:130 [THR] a:555 [G] ❌ 7RYG_a:555 no longer at interface
1e:121 [LYS] 1a:558 [G] e:125 [LYS] a:555 [G] ❌ 7RYG_a:555 no longer at interface
1e:48 [ALA] 1a:1072 [G] e:52 [ALA] a:1069 [G] ❌ 7RYG_e:52, 7RYG_a:1069 no longer at interface
1e:79 [GLU] 1a:4 [U] e:83 [PRO] a:6 [C] ❌ 7RYG_e:83, 7RYG_a:6 no longer at interface
1e:49 [PRO] 1a:1072 [G] e:53 [ARG] a:1069 [G] ❌ 7RYG_a:1069 no longer at interface
1e:20 [GLN] 1a:1069 [C] e:24 [VAL] a:1066 [C] ❌ 7RYG_a:1066 no longer at interface
1e:47 [LYS] 1a:1077 [G] e:51 [LYS] a:1074 [G] ❌ 7RYG_a:1074 no longer at interface
1e:25 [ARG] 1a:1069 [C] e:29 [ILE] a:1066 [C] ❌ 7RYG_a:1066 no longer at interface
1e:25 [ARG] 1a:1192 [C] e:29 [ILE] a:1189 [C] ❌ 7RYG_a:1189 no longer at interface
1e:53 [LEU] 1a:1072 [G] e:57 [ALA] a:1069 [G] ❌ 7RYG_e:57, 7RYG_a:1069 no longer at interface
1e:22 [GLY] 1a:1195 [C] e:26 [GLY] a:1192 [C] ❌ 7RYG_a:1192 no longer at interface
1e:123 [LEU] 1a:298 [A] e:127 [TYR] a:294 [A] ❌ 4Y4O_1a:298 no longer at interface
1e:21 [ALA] 1a:924 [C] e:25 [LYS] a:921 [C] ❌ 4Y4O_1a:924 no longer at interface
1e:83 [GLU] 1a:862 [C] e:87 [ARG] a:859 [C] ❌ 4Y4O_1a:862 no longer at interface
1e:104 [ALA] 1a:8 [A] e:108 [GLY] a:10 [A] ❌ 7RYG_e:108 no longer at interface
1e:61 [TYR] 1a:1074 [G] e:65 [ALA] a:1071 [G] ❌ 7RYG_e:65 no longer at interface
1e:60 [TYR] 1a:1073 [U] e:64 [GLU] a:1070 [U] ❌ 7RYG_e:64 no longer at interface
1e:60 [TYR] 1a:1074 [G] e:64 [GLU] a:1071 [G] ❌ 7RYG_e:64 no longer at interface
1e:106 [PRO] 1a:9 [G] e:110 [MET] a:11 [G] ❌ 4Y4O_1e:106 no longer at interface
1e:29 [GLY] 1a:1080 [A] e:33 [THR] a:1077 [A] ❌ 4Y4O_1e:29 no longer at interface
1e:88 [LYS] 1a:560 [U] e:92 [ARG] a:557 [U] ❌ 4Y4O_1e:88 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA 0.92 2.08 0.50 0.96 0.91 0.94 0.92 0.81 0.80 0.31 0.43


Other pairs involving 4Y4O_1e_1a or 7RYG_e_a

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1e_1a 6S0X_e_a 0.59 0.96 2.62 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7K00_E_A 0.83 0.98 0.91 0.44 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7O7Y_Ab_A2 0.67 0.93 1.93 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
4Y4O_1e_1a 7O7Z_Ab_A2 0.67 0.93 1.9 0.16 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
6S0X_e_a 7RYG_e_a 0.59 0.97 1.64 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
7K00_E_A 7RYG_e_a 0.91 0.94 1.67 0.75 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7RYG_e_a 0.81 0.92 2.08 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare