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All interfaces > All interologs > Interface groups > group101 > 6S0X_e_a vs 7K00_E_A

Interface analysis


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Licorice
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RNA

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Licorice
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Common contacts -

6S0X_e
6S0X_a
7K00_E
7K00_A
Conserved?
e:24 [VAL] a:16 [G] E:24 [THR] A:15 [G] ✔
e:24 [VAL] a:930 [U] E:24 [THR] A:921 [U] ✔
e:24 [VAL] a:931 [G] E:24 [THR] A:922 [G] ✔
e:24 [VAL] a:1406 [A] E:24 [THR] A:1396 [A] ✔
e:24 [VAL] a:1408 [A] E:24 [THR] A:1398 [A] ✔
e:32 [ARG] a:1092 [G] E:32 [SER] A:1081 [A] ✔
e:135 [ASN] a:1089 [U] E:135 [ASN] A:1078 [U] ✔
e:98 [PRO] a:7 [G] E:98 [PRO] A:6 [G] ✔
e:91 [SER] a:20 [C] E:91 [GLY] A:19 [A] ✔
e:91 [SER] a:21 [U] E:91 [GLY] A:20 [U] ✔
e:91 [SER] a:873 [A] E:91 [GLY] A:864 [A] ✔
e:126 [LYS] a:8 [G] E:126 [LYS] A:7 [A] ✔
e:126 [LYS] a:9 [A] E:126 [LYS] A:8 [A] ✔
e:126 [LYS] a:566 [G] E:126 [LYS] A:558 [G] ✔
e:108 [GLY] a:9 [A] E:108 [GLY] A:8 [A] ✔
e:26 [LYS] a:931 [G] E:26 [LYS] A:922 [G] ✔
e:26 [LYS] a:932 [A] E:26 [LYS] A:923 [A] ✔
e:89 [TYR] a:1089 [U] E:89 [HIS] A:1078 [U] ✔
e:69 [LYS] a:1085 [G] E:69 [ARG] A:1074 [G] ✔
e:69 [LYS] a:1086 [U] E:69 [ARG] A:1075 [U] ✔
e:107 [ALA] a:9 [A] E:107 [ALA] A:8 [A] ✔
e:25 [VAL] a:930 [U] E:25 [VAL] A:921 [U] ✔
e:25 [VAL] a:931 [G] E:25 [VAL] A:922 [G] ✔
e:25 [VAL] a:1408 [A] E:25 [VAL] A:1398 [A] ✔
e:127 [SER] a:10 [G] E:127 [ALA] A:9 [G] ✔
e:90 [GLY] a:873 [A] E:90 [THR] A:864 [A] ✔
e:23 [LYS] a:930 [U] E:23 [LYS] A:921 [U] ✔
e:23 [LYS] a:1092 [G] E:23 [LYS] A:1081 [A] ✔
e:23 [LYS] a:1093 [A] E:23 [LYS] A:1082 [A] ✔
e:29 [ARG] a:16 [G] E:29 [ARG] A:15 [G] ✔
e:99 [ALA] a:7 [G] E:99 [ALA] A:6 [G] ✔
e:131 [ASN] a:10 [G] E:131 [THR] A:9 [G] ✔
e:128 [LEU] a:568 [A] E:128 [TYR] A:560 [A] ✔
e:138 [ARG] a:1089 [U] E:138 [ARG] A:1078 [U] ✔
e:97 [LYS] a:7 [G] E:97 [GLN] A:6 [G] ✔
e:97 [LYS] a:8 [G] E:97 [GLN] A:7 [A] ✔
e:62 [LYS] a:1084 [U] E:62 [LYS] A:1073 [U] ✔
e:132 [THR] a:19 [C] E:132 [ASN] A:18 [C] ✔
e:132 [THR] a:20 [C] E:132 [ASN] A:19 [A] ✔
e:124 [LEU] a:7 [G] E:124 [LEU] A:6 [G] ✔
e:124 [LEU] a:8 [G] E:124 [LEU] A:7 [A] ✔
e:22 [ALA] a:16 [G] E:22 [SER] A:15 [G] ✔
e:22 [ALA] a:17 [A] E:22 [SER] A:16 [A] ✔
e:22 [ALA] a:1092 [G] E:22 [SER] A:1081 [A] ✔
e:130 [SER] a:20 [C] E:130 [SER] A:19 [A] ✔
e:125 [SER] a:8 [G] E:125 [ALA] A:7 [A] ✔
e:125 [SER] a:9 [A] E:125 [ALA] A:8 [A] ✔
e:100 [ALA] a:6 [U] E:100 [SER] A:5 [U] ✔
e:52 [LYS] a:1091 [A] E:52 [LYS] A:1080 [A] ✔
e:52 [LYS] a:1092 [G] E:52 [LYS] A:1081 [A] ✔
e:21 [VAL] a:1091 [A] E:21 [VAL] A:1080 [A] ✔
e:21 [VAL] a:1092 [G] E:21 [VAL] A:1081 [A] ✔
e:134 [ILE] a:1089 [U] E:134 [ILE] A:1078 [U] ✔
e:134 [ILE] a:1090 [G] E:134 [ILE] A:1079 [G] ✔
e:106 [ILE] a:7 [G] E:106 [ILE] A:6 [G] ❌ 7K00_E_A
e:32 [ARG] a:1091 [A] E:32 [SER] A:1080 [A] ❌ 7K00_E_A
e:91 [SER] a:19 [C] E:91 [GLY] A:18 [C] ❌ 7K00_E_A
e:126 [LYS] a:568 [A] E:126 [LYS] A:560 [A] ❌ 7K00_E_A
e:127 [SER] a:9 [A] E:127 [ALA] A:8 [A] ❌ 7K00_E_A
e:131 [ASN] a:20 [C] E:131 [THR] A:19 [A] ❌ 7K00_E_A
e:97 [LYS] a:6 [U] E:97 [GLN] A:5 [U] ❌ 7K00_E_A
e:30 [ARG] a:1082 [C] E:30 [ILE] A:1071 [C] ❌ 7K00_E_A
e:30 [ARG] a:1083 [G] E:30 [ILE] A:1072 [G] ❌ 7K00_E_A
e:62 [LYS] a:1085 [G] E:62 [LYS] A:1074 [G] ❌ 7K00_E_A
e:65 [GLU] a:1085 [G] E:65 [GLU] A:1074 [G] ❌ 7K00_E_A
e:52 [LYS] a:1090 [G] E:52 [LYS] A:1079 [G] ❌ 7K00_E_A
e:134 [ILE] a:19 [C] E:134 [ILE] A:18 [C] ❌ 7K00_E_A
e:100 [ALA] a:7 [G] E:100 [SER] A:6 [G] ❌ 6S0X_e_a
e:106 [ILE] a:8 [G] E:106 [ILE] A:7 [A] ❌ 6S0X_e_a
e:106 [ILE] a:9 [A] E:106 [ILE] A:8 [A] ❌ 6S0X_e_a
e:108 [GLY] a:10 [G] E:108 [GLY] A:9 [G] ❌ 6S0X_e_a
e:125 [SER] a:10 [G] E:125 [ALA] A:9 [G] ❌ 6S0X_e_a
e:126 [LYS] a:10 [G] E:126 [LYS] A:9 [G] ❌ 6S0X_e_a
e:128 [LEU] a:8 [G] E:128 [TYR] A:7 [A] ❌ 6S0X_e_a
e:130 [SER] a:19 [C] E:130 [SER] A:18 [C] ❌ 6S0X_e_a
e:130 [SER] a:21 [U] E:130 [SER] A:20 [U] ❌ 6S0X_e_a
e:135 [ASN] a:20 [C] E:135 [ASN] A:19 [A] ❌ 6S0X_e_a
e:135 [ASN] a:19 [C] E:135 [ASN] A:18 [C] ❌ 6S0X_e_a
e:138 [ARG] a:1090 [G] E:138 [ARG] A:1079 [G] ❌ 6S0X_e_a
e:21 [VAL] a:17 [A] E:21 [VAL] A:16 [A] ❌ 6S0X_e_a
e:22 [ALA] a:1091 [A] E:22 [SER] A:1080 [A] ❌ 6S0X_e_a
e:23 [LYS] a:931 [G] E:23 [LYS] A:922 [G] ❌ 6S0X_e_a
e:23 [LYS] a:16 [G] E:23 [LYS] A:15 [G] ❌ 6S0X_e_a
e:23 [LYS] a:1091 [A] E:23 [LYS] A:1080 [A] ❌ 6S0X_e_a
e:25 [VAL] a:932 [A] E:25 [VAL] A:923 [A] ❌ 6S0X_e_a
e:26 [LYS] a:1408 [A] E:26 [LYS] A:1398 [A] ❌ 6S0X_e_a
e:29 [ARG] a:1406 [A] E:29 [ARG] A:1396 [A] ❌ 6S0X_e_a
e:30 [ARG] a:1092 [G] E:30 [ILE] A:1081 [A] ❌ 6S0X_e_a
e:62 [LYS] a:1083 [G] E:62 [LYS] A:1072 [G] ❌ 6S0X_e_a
e:65 [GLU] a:1084 [U] E:65 [GLU] A:1073 [U] ❌ 6S0X_e_a
e:90 [GLY] a:19 [C] E:90 [THR] A:18 [C] ❌ 6S0X_e_a
e:90 [GLY] a:1089 [U] E:90 [THR] A:1078 [U] ❌ 6S0X_e_a
e:90 [GLY] a:20 [C] E:90 [THR] A:19 [A] ❌ 6S0X_e_a
e:98 [PRO] a:5 [A] E:98 [PRO] A:4 [U] ❌ 7K00_A:4 no longer at interface
e:88 [ARG] a:872 [U] E:88 [VAL] A:863 [U] ❌ 7K00_E:88, 7K00_A:863 no longer at interface
e:26 [LYS] a:1398 [U] E:26 [LYS] A:1388 [C] ❌ 7K00_A:1388 no longer at interface
e:90 [GLY] a:872 [U] E:90 [THR] A:863 [U] ❌ 7K00_A:863 no longer at interface
e:97 [LYS] a:5 [A] E:97 [GLN] A:4 [U] ❌ 7K00_A:4 no longer at interface
e:84 [THR] a:5 [A] E:84 [PRO] A:4 [U] ❌ 7K00_E:84, 7K00_A:4 no longer at interface
e:52 [LYS] a:1088 [G] E:52 [LYS] A:1077 [G] ❌ 7K00_A:1077 no longer at interface
e:126 [LYS] a:567 [A] E:126 [LYS] A:559 [A] ❌ 6S0X_a:567 no longer at interface
e:127 [SER] a:567 [A] E:127 [ALA] A:559 [A] ❌ 6S0X_a:567 no longer at interface
e:128 [LEU] a:306 [A] E:128 [TYR] A:298 [A] ❌ 6S0X_a:306 no longer at interface
e:131 [ASN] a:11 [A] E:131 [THR] A:10 [A] ❌ 6S0X_a:11 no longer at interface
e:132 [THR] a:18 [U] E:132 [ASN] A:17 [U] ❌ 6S0X_a:18 no longer at interface
e:19 [ASN] a:18 [U] E:19 [ASN] A:17 [U] ❌ 6S0X_e:19, 6S0X_a:18 no longer at interface
e:20 [ARG] a:18 [U] E:20 [ARG] A:17 [U] ❌ 6S0X_e:20, 6S0X_a:18 no longer at interface
e:21 [VAL] a:18 [U] E:21 [VAL] A:17 [U] ❌ 6S0X_a:18 no longer at interface
e:25 [VAL] a:1081 [U] E:25 [VAL] A:1070 [U] ❌ 6S0X_a:1081 no longer at interface
e:26 [LYS] a:933 [C] E:26 [LYS] A:924 [C] ❌ 6S0X_a:933 no longer at interface
e:27 [GLY] a:1204 [U] E:27 [GLY] A:1194 [U] ❌ 6S0X_e:27, 6S0X_a:1204 no longer at interface
e:27 [GLY] a:1203 [G] E:27 [GLY] A:1193 [G] ❌ 6S0X_e:27, 6S0X_a:1203 no longer at interface
e:29 [ARG] a:1407 [C] E:29 [ARG] A:1397 [C] ❌ 6S0X_a:1407 no longer at interface
e:30 [ARG] a:1081 [U] E:30 [ILE] A:1070 [U] ❌ 6S0X_a:1081 no longer at interface
e:86 [THR] a:574 [G] E:86 [LYS] A:566 [G] ❌ 6S0X_e:86, 6S0X_a:574 no longer at interface
e:90 [GLY] a:874 [A] E:90 [THR] A:865 [A] ❌ 6S0X_a:874 no longer at interface
e:109 [GLY] a:9 [A] E:109 [GLY] A:8 [A] ❌ 7K00_E:109 no longer at interface
e:54 [GLN] a:1083 [G] E:55 [GLU] A:1072 [G] ❌ 7K00_E:55 no longer at interface
e:123 [ILE] a:7 [G] E:123 [VAL] A:6 [G] ❌ 7K00_E:123 no longer at interface
e:111 [VAL] a:9 [A] E:111 [MET] A:8 [A] ❌ 7K00_E:111 no longer at interface
e:103 [THR] a:8 [G] E:103 [THR] A:7 [A] ❌ 6S0X_e:103 no longer at interface
e:103 [THR] a:7 [G] E:103 [THR] A:6 [G] ❌ 6S0X_e:103 no longer at interface
e:112 [ARG] a:9 [A] E:112 [ARG] A:8 [A] ❌ 6S0X_e:112 no longer at interface
e:129 [GLY] a:568 [A] E:129 [GLY] A:560 [A] ❌ 6S0X_e:129 no longer at interface
e:19 [ASN] a:17 [A] E:19 [ASN] A:16 [A] ❌ 6S0X_e:19 no longer at interface
e:20 [ARG] a:17 [A] E:20 [ARG] A:16 [A] ❌ 6S0X_e:20 no longer at interface
e:27 [GLY] a:1408 [A] E:27 [GLY] A:1398 [A] ❌ 6S0X_e:27 no longer at interface
e:28 [GLY] a:1408 [A] E:28 [GLY] A:1398 [A] ❌ 6S0X_e:28 no longer at interface
e:31 [PHE] a:16 [G] E:31 [PHE] A:15 [G] ❌ 6S0X_e:31 no longer at interface
e:34 [THR] a:1091 [A] E:34 [THR] A:1080 [A] ❌ 6S0X_e:34 no longer at interface
e:50 [THR] a:1090 [G] E:50 [TYR] A:1079 [G] ❌ 6S0X_e:50 no longer at interface
e:50 [THR] a:1091 [A] E:50 [TYR] A:1080 [A] ❌ 6S0X_e:50 no longer at interface
e:66 [ALA] a:1085 [G] E:66 [LYS] A:1074 [G] ❌ 6S0X_e:66 no longer at interface
e:92 [GLY] a:20 [C] E:92 [SER] A:19 [A] ❌ 6S0X_e:92 no longer at interface
e:93 [SER] a:568 [A] E:93 [ARG] A:560 [A] ❌ 6S0X_e:93 no longer at interface
e:95 [PHE] a:8 [G] E:95 [PHE] A:7 [A] ❌ 6S0X_e:95 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA 0.96 2.44 0.47 0.9 0.95 0.85 0.88 0.57 0.46 0.18 0.52


Other pairs involving 6S0X_e_a or 7K00_E_A

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0X_e_a 7O7Y_Ab_A2 0.44 0.89 2.76 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
6S0X_e_a 7RYG_e_a 0.59 0.97 1.64 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
6S0X_e_a 7K00_E_A 0.57 0.96 2.44 0.47 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
6S0X_e_a 7O7Z_Ab_A2 0.44 0.89 2.76 0.2 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
7K00_E_A 7O7Z_Ab_A2 0.73 0.92 1.74 0.16 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
7K00_E_A 7O7Y_Ab_A2 0.73 0.92 1.76 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
7K00_E_A 7RYG_e_a 0.91 0.94 1.67 0.75 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 6S0X_e_a 0.59 0.96 2.62 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7K00_E_A 0.83 0.98 0.91 0.44 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare