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All interfaces > All interologs > Interface groups > group101 > 6S0X_e_a vs 7O7Y_Ab_A2

Interface analysis


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Licorice
Surface

RNA

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Licorice
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Common contacts -

6S0X_e
6S0X_a
7O7Y_Ab
7O7Y_A2
Conserved?
e:24 [VAL] a:16 [G] Ab:115 [GLN] A2:10 [G] ✔
e:24 [VAL] a:930 [U] Ab:115 [GLN] A2:1203 [U] ✔
e:24 [VAL] a:931 [G] Ab:115 [GLN] A2:1204 [G] ✔
e:24 [VAL] a:1406 [A] Ab:115 [GLN] A2:1698 [A] ✔
e:24 [VAL] a:1408 [A] Ab:115 [GLN] A2:1700 [A] ✔
e:135 [ASN] a:1089 [U] Ab:238 [LYS] A2:1356 [C] ✔
e:91 [SER] a:19 [C] Ab:190 [SER] A2:13 [C] ✔
e:91 [SER] a:20 [C] Ab:190 [SER] A2:14 [C] ✔
e:91 [SER] a:21 [U] Ab:190 [SER] A2:15 [U] ✔
e:91 [SER] a:873 [A] Ab:190 [SER] A2:1144 [A] ✔
e:126 [LYS] a:8 [G] Ab:224 [THR] A2:2 [A] ✔
e:126 [LYS] a:9 [A] Ab:224 [THR] A2:3 [C] ✔
e:108 [GLY] a:9 [A] Ab:206 [SER] A2:3 [C] ✔
e:26 [LYS] a:931 [G] Ab:117 [ARG] A2:1204 [G] ✔
e:26 [LYS] a:932 [A] Ab:117 [ARG] A2:1205 [A] ✔
e:26 [LYS] a:1398 [U] Ab:117 [ARG] A2:1690 [C] ✔
e:107 [ALA] a:9 [A] Ab:205 [VAL] A2:3 [C] ✔
e:25 [VAL] a:930 [U] Ab:116 [THR] A2:1203 [U] ✔
e:25 [VAL] a:931 [G] Ab:116 [THR] A2:1204 [G] ✔
e:25 [VAL] a:1408 [A] Ab:116 [THR] A2:1700 [A] ✔
e:127 [SER] a:9 [A] Ab:225 [SER] A2:3 [C] ✔
e:127 [SER] a:10 [G] Ab:225 [SER] A2:4 [C] ✔
e:23 [LYS] a:930 [U] Ab:114 [LYS] A2:1203 [U] ✔
e:23 [LYS] a:1092 [G] Ab:114 [LYS] A2:1359 [U] ✔
e:23 [LYS] a:1093 [A] Ab:114 [LYS] A2:1360 [U] ✔
e:131 [ASN] a:10 [G] Ab:230 [THR] A2:4 [C] ✔
e:132 [THR] a:19 [C] Ab:232 [THR] A2:13 [C] ✔
e:132 [THR] a:20 [C] Ab:232 [THR] A2:14 [C] ✔
e:22 [ALA] a:16 [G] Ab:113 [GLN] A2:10 [G] ✔
e:22 [ALA] a:17 [A] Ab:113 [GLN] A2:11 [A] ✔
e:22 [ALA] a:1092 [G] Ab:113 [GLN] A2:1359 [U] ✔
e:125 [SER] a:8 [G] Ab:223 [TYR] A2:2 [A] ✔
e:21 [VAL] a:1091 [A] Ab:112 [VAL] A2:1358 [A] ✔
e:21 [VAL] a:1092 [G] Ab:112 [VAL] A2:1359 [U] ✔
e:109 [GLY] a:9 [A] Ab:208 [PRO] A2:3 [C] ❌ 7O7Y_Ab_A2
e:126 [LYS] a:568 [A] Ab:224 [THR] A2:657 [G] ❌ 7O7Y_Ab_A2
e:89 [TYR] a:1089 [U] Ab:187 [ARG] A2:1356 [C] ❌ 7O7Y_Ab_A2
e:90 [GLY] a:872 [U] Ab:188 [CYS] A2:1143 [G] ❌ 7O7Y_Ab_A2
e:90 [GLY] a:873 [A] Ab:188 [CYS] A2:1144 [A] ❌ 7O7Y_Ab_A2
e:29 [ARG] a:16 [G] Ab:121 [ARG] A2:10 [G] ❌ 7O7Y_Ab_A2
e:131 [ASN] a:20 [C] Ab:230 [THR] A2:14 [C] ❌ 7O7Y_Ab_A2
e:128 [LEU] a:568 [A] Ab:226 [ALA] A2:657 [G] ❌ 7O7Y_Ab_A2
e:130 [SER] a:20 [C] Ab:228 [GLY] A2:14 [C] ❌ 7O7Y_Ab_A2
e:125 [SER] a:9 [A] Ab:223 [TYR] A2:3 [C] ❌ 7O7Y_Ab_A2
e:52 [LYS] a:1090 [G] Ab:142 [LYS] A2:1357 [G] ❌ 7O7Y_Ab_A2
e:52 [LYS] a:1091 [A] Ab:142 [LYS] A2:1358 [A] ❌ 7O7Y_Ab_A2
e:52 [LYS] a:1092 [G] Ab:142 [LYS] A2:1359 [U] ❌ 7O7Y_Ab_A2
e:21 [VAL] a:17 [A] Ab:112 [VAL] A2:11 [A] ❌ 6S0X_e_a
e:22 [ALA] a:1091 [A] Ab:113 [GLN] A2:1358 [A] ❌ 6S0X_e_a
e:23 [LYS] a:16 [G] Ab:114 [LYS] A2:10 [G] ❌ 6S0X_e_a
e:26 [LYS] a:1408 [A] Ab:117 [ARG] A2:1700 [A] ❌ 6S0X_e_a
e:29 [ARG] a:1092 [G] Ab:121 [ARG] A2:1359 [U] ❌ 6S0X_e_a
e:29 [ARG] a:1093 [A] Ab:121 [ARG] A2:1360 [U] ❌ 6S0X_e_a
e:52 [LYS] a:1084 [U] Ab:142 [LYS] A2:1351 [U] ❌ 6S0X_e_a
e:52 [LYS] a:1083 [G] Ab:142 [LYS] A2:1350 [G] ❌ 6S0X_e_a
e:89 [TYR] a:872 [U] Ab:187 [ARG] A2:1143 [G] ❌ 6S0X_e_a
e:89 [TYR] a:873 [A] Ab:187 [ARG] A2:1144 [A] ❌ 6S0X_e_a
e:90 [GLY] a:1089 [U] Ab:188 [CYS] A2:1356 [C] ❌ 6S0X_e_a
e:90 [GLY] a:20 [C] Ab:188 [CYS] A2:14 [C] ❌ 6S0X_e_a
e:107 [ALA] a:8 [G] Ab:205 [VAL] A2:2 [A] ❌ 6S0X_e_a
e:107 [ALA] a:7 [G] Ab:205 [VAL] A2:1 [U] ❌ 6S0X_e_a
e:109 [GLY] a:10 [G] Ab:208 [PRO] A2:4 [C] ❌ 6S0X_e_a
e:125 [SER] a:7 [G] Ab:223 [TYR] A2:1 [U] ❌ 6S0X_e_a
e:126 [LYS] a:10 [G] Ab:224 [THR] A2:4 [C] ❌ 6S0X_e_a
e:127 [SER] a:8 [G] Ab:225 [SER] A2:2 [A] ❌ 6S0X_e_a
e:128 [LEU] a:10 [G] Ab:226 [ALA] A2:4 [C] ❌ 6S0X_e_a
e:130 [SER] a:21 [U] Ab:228 [GLY] A2:15 [U] ❌ 6S0X_e_a
e:135 [ASN] a:1090 [G] Ab:238 [LYS] A2:1357 [G] ❌ 6S0X_e_a
e:126 [LYS] a:566 [G] Ab:224 [THR] A2:655 [A] ❌ 7O7Y_A2:655 no longer at interface
e:62 [LYS] a:1085 [G] Ab:157 [LEU] A2:1352 [G] ❌ 7O7Y_Ab:157, 7O7Y_A2:1352 no longer at interface
e:65 [GLU] a:1085 [G] Ab:160 [LEU] A2:1352 [G] ❌ 7O7Y_Ab:160, 7O7Y_A2:1352 no longer at interface
e:52 [LYS] a:1088 [G] Ab:142 [LYS] A2:1355 [G] ❌ 7O7Y_A2:1355 no longer at interface
e:19 [ASN] a:18 [U] Ab:110 [MET] A2:12 [U] ❌ 6S0X_e:19, 6S0X_a:18 no longer at interface
e:20 [ARG] a:18 [U] Ab:111 [PRO] A2:12 [U] ❌ 6S0X_e:20, 6S0X_a:18 no longer at interface
e:21 [VAL] a:18 [U] Ab:112 [VAL] A2:12 [U] ❌ 6S0X_a:18 no longer at interface
e:23 [LYS] a:1081 [U] Ab:114 [LYS] A2:1348 [PSU] ❌ 6S0X_a:1081 no longer at interface
e:25 [VAL] a:1203 [G] Ab:116 [THR] A2:1487 [A] ❌ 6S0X_a:1203 no longer at interface
e:26 [LYS] a:1075 [G] Ab:117 [ARG] A2:1342 [C] ❌ 6S0X_a:1075 no longer at interface
e:26 [LYS] a:1397 [G] Ab:117 [ARG] A2:1689 [C] ❌ 6S0X_a:1397 no longer at interface
e:27 [GLY] a:1204 [U] Ab:118 [ALA] A2:1488 [A] ❌ 6S0X_e:27, 6S0X_a:1204 no longer at interface
e:27 [GLY] a:1203 [G] Ab:118 [ALA] A2:1487 [A] ❌ 6S0X_e:27, 6S0X_a:1203 no longer at interface
e:28 [GLY] a:1204 [U] Ab:120 [GLN] A2:1488 [A] ❌ 6S0X_e:28, 6S0X_a:1204 no longer at interface
e:28 [GLY] a:1407 [C] Ab:120 [GLN] A2:1699 [C] ❌ 6S0X_e:28, 6S0X_a:1407 no longer at interface
e:89 [TYR] a:871 [C] Ab:187 [ARG] A2:1142 [G] ❌ 6S0X_a:871 no longer at interface
e:110 [PRO] a:11 [A] Ab:209 [VAL] A2:5 [U] ❌ 6S0X_e:110, 6S0X_a:11 no longer at interface
e:131 [ASN] a:11 [A] Ab:230 [THR] A2:5 [U] ❌ 6S0X_a:11 no longer at interface
e:133 [PRO] a:11 [A] Ab:236 [PHE] A2:5 [U] ❌ 6S0X_e:133, 6S0X_a:11 no longer at interface
e:106 [ILE] a:7 [G] Ab:204 [ILE] A2:1 [U] ❌ 7O7Y_Ab:204 no longer at interface
e:32 [ARG] a:1091 [A] Ab:124 [PHE] A2:1358 [A] ❌ 7O7Y_Ab:124 no longer at interface
e:32 [ARG] a:1092 [G] Ab:124 [PHE] A2:1359 [U] ❌ 7O7Y_Ab:124 no longer at interface
e:98 [PRO] a:7 [G] Ab:198 [ALA] A2:1 [U] ❌ 7O7Y_Ab:198 no longer at interface
e:88 [ARG] a:872 [U] Ab:186 [GLY] A2:1143 [G] ❌ 7O7Y_Ab:186 no longer at interface
e:99 [ALA] a:7 [G] Ab:199 [PRO] A2:1 [U] ❌ 7O7Y_Ab:199 no longer at interface
e:54 [GLN] a:1083 [G] Ab:147 [VAL] A2:1350 [G] ❌ 7O7Y_Ab:147 no longer at interface
e:138 [ARG] a:1089 [U] Ab:241 [PHE] A2:1356 [C] ❌ 7O7Y_Ab:241 no longer at interface
e:97 [LYS] a:7 [G] Ab:197 [PRO] A2:1 [U] ❌ 7O7Y_Ab:197 no longer at interface
e:97 [LYS] a:8 [G] Ab:197 [PRO] A2:2 [A] ❌ 7O7Y_Ab:197 no longer at interface
e:123 [ILE] a:7 [G] Ab:221 [ASP] A2:1 [U] ❌ 7O7Y_Ab:221 no longer at interface
e:30 [ARG] a:1082 [C] Ab:122 [THR] A2:1349 [G] ❌ 7O7Y_Ab:122 no longer at interface
e:30 [ARG] a:1083 [G] Ab:122 [THR] A2:1350 [G] ❌ 7O7Y_Ab:122 no longer at interface
e:62 [LYS] a:1084 [U] Ab:157 [LEU] A2:1351 [U] ❌ 7O7Y_Ab:157 no longer at interface
e:124 [LEU] a:7 [G] Ab:222 [CYS] A2:1 [U] ❌ 7O7Y_Ab:222 no longer at interface
e:124 [LEU] a:8 [G] Ab:222 [CYS] A2:2 [A] ❌ 7O7Y_Ab:222 no longer at interface
e:111 [VAL] a:9 [A] Ab:210 [PRO] A2:3 [C] ❌ 7O7Y_Ab:210 no longer at interface
e:134 [ILE] a:19 [C] Ab:237 [ALA] A2:13 [C] ❌ 7O7Y_Ab:237 no longer at interface
e:134 [ILE] a:1089 [U] Ab:237 [ALA] A2:1356 [C] ❌ 7O7Y_Ab:237 no longer at interface
e:134 [ILE] a:1090 [G] Ab:237 [ALA] A2:1357 [G] ❌ 7O7Y_Ab:237 no longer at interface
e:19 [ASN] a:19 [C] Ab:110 [MET] A2:13 [C] ❌ 6S0X_e:19 no longer at interface
e:20 [ARG] a:17 [A] Ab:111 [PRO] A2:11 [A] ❌ 6S0X_e:20 no longer at interface
e:27 [GLY] a:1408 [A] Ab:118 [ALA] A2:1700 [A] ❌ 6S0X_e:27 no longer at interface
e:28 [GLY] a:16 [G] Ab:120 [GLN] A2:10 [G] ❌ 6S0X_e:28 no longer at interface
e:31 [PHE] a:1082 [C] Ab:123 [ARG] A2:1349 [G] ❌ 6S0X_e:31 no longer at interface
e:31 [PHE] a:1092 [G] Ab:123 [ARG] A2:1359 [U] ❌ 6S0X_e:31 no longer at interface
e:31 [PHE] a:1091 [A] Ab:123 [ARG] A2:1358 [A] ❌ 6S0X_e:31 no longer at interface
e:33 [PHE] a:1091 [A] Ab:125 [LYS] A2:1358 [A] ❌ 6S0X_e:33 no longer at interface
e:33 [PHE] a:1090 [G] Ab:125 [LYS] A2:1357 [G] ❌ 6S0X_e:33 no longer at interface
e:53 [ALA] a:1092 [G] Ab:143 [CYS] A2:1359 [U] ❌ 6S0X_e:53 no longer at interface
e:53 [ALA] a:1091 [A] Ab:143 [CYS] A2:1358 [A] ❌ 6S0X_e:53 no longer at interface
e:96 [MET] a:8 [G] Ab:196 [ILE] A2:2 [A] ❌ 6S0X_e:96 no longer at interface
e:104 [GLY] a:7 [G] Ab:202 [THR] A2:1 [U] ❌ 6S0X_e:104 no longer at interface
e:129 [GLY] a:568 [A] Ab:227 [ARG] A2:657 [G] ❌ 6S0X_e:129 no longer at interface
e:129 [GLY] a:21 [U] Ab:227 [ARG] A2:15 [U] ❌ 6S0X_e:129 no longer at interface
e:133 [PRO] a:10 [G] Ab:236 [PHE] A2:4 [C] ❌ 6S0X_e:133 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like 0.89 2.76 0.17 0.79 0.89 0.55 0.81 0.44 0.35 0.17 0.62


Other pairs involving 6S0X_e_a or 7O7Y_Ab_A2

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0X_e_a 7O7Y_Ab_A2 0.44 0.89 2.76 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
6S0X_e_a 7RYG_e_a 0.59 0.97 1.64 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
6S0X_e_a 7K00_E_A 0.57 0.96 2.44 0.47 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
6S0X_e_a 7O7Z_Ab_A2 0.44 0.89 2.76 0.2 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
7K00_E_A 7O7Y_Ab_A2 0.73 0.92 1.76 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
4Y4O_1e_1a 6S0X_e_a 0.59 0.96 2.62 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7O7Y_Ab_A2 0.67 0.93 1.93 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare