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All interfaces > All interologs > Interface groups > group101 > 6S0X_e_a vs 7RYG_e_a

Interface analysis


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Licorice
Surface

RNA

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Licorice
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Common contacts -

6S0X_e
6S0X_a
7RYG_e
7RYG_a
Conserved?
e:24 [VAL] a:16 [G] e:23 [VAL] a:17 [G] ✔
e:24 [VAL] a:930 [U] e:23 [VAL] a:918 [U] ✔
e:24 [VAL] a:931 [G] e:23 [VAL] a:919 [G] ✔
e:24 [VAL] a:1406 [A] e:23 [VAL] a:1393 [A] ✔
e:24 [VAL] a:1408 [A] e:23 [VAL] a:1395 [A] ✔
e:32 [ARG] a:1092 [G] e:31 [SER] a:1078 [G] ✔
e:135 [ASN] a:1089 [U] e:134 [ASN] a:1075 [U] ✔
e:98 [PRO] a:7 [G] e:97 [PRO] a:8 [G] ✔
e:91 [SER] a:20 [C] e:90 [ALA] a:21 [A] ✔
e:91 [SER] a:21 [U] e:90 [ALA] a:22 [U] ✔
e:91 [SER] a:873 [A] e:90 [ALA] a:861 [A] ✔
e:126 [LYS] a:8 [G] e:125 [LYS] a:9 [A] ✔
e:126 [LYS] a:9 [A] e:125 [LYS] a:10 [A] ✔
e:108 [GLY] a:9 [A] e:107 [GLY] a:10 [A] ✔
e:88 [ARG] a:872 [U] e:87 [ARG] a:860 [U] ✔
e:26 [LYS] a:931 [G] e:25 [LYS] a:919 [G] ✔
e:26 [LYS] a:932 [A] e:25 [LYS] a:920 [A] ✔
e:89 [TYR] a:1089 [U] e:88 [HIS] a:1075 [U] ✔
e:69 [LYS] a:1085 [G] e:68 [ARG] a:1071 [G] ✔
e:69 [LYS] a:1086 [U] e:68 [ARG] a:1072 [U] ✔
e:107 [ALA] a:9 [A] e:106 [ALA] a:10 [A] ✔
e:25 [VAL] a:930 [U] e:24 [VAL] a:918 [U] ✔
e:25 [VAL] a:931 [G] e:24 [VAL] a:919 [G] ✔
e:25 [VAL] a:1408 [A] e:24 [VAL] a:1395 [A] ✔
e:127 [SER] a:10 [G] e:126 [CYS] a:11 [G] ✔
e:90 [GLY] a:873 [A] e:89 [GLY] a:861 [A] ✔
e:23 [LYS] a:930 [U] e:22 [LYS] a:918 [U] ✔
e:23 [LYS] a:1092 [G] e:22 [LYS] a:1078 [G] ✔
e:23 [LYS] a:1093 [A] e:22 [LYS] a:1079 [A] ✔
e:29 [ARG] a:16 [G] e:28 [ARG] a:17 [G] ✔
e:99 [ALA] a:7 [G] e:98 [ALA] a:8 [G] ✔
e:131 [ASN] a:10 [G] e:130 [THR] a:11 [G] ✔
e:128 [LEU] a:568 [A] e:127 [TYR] a:557 [U] ✔
e:138 [ARG] a:1089 [U] e:137 [ASN] a:1075 [U] ✔
e:97 [LYS] a:7 [G] e:96 [GLN] a:8 [G] ✔
e:97 [LYS] a:8 [G] e:96 [GLN] a:9 [A] ✔
e:62 [LYS] a:1084 [U] e:61 [LYS] a:1070 [U] ✔
e:132 [THR] a:19 [C] e:131 [ASN] a:20 [C] ✔
e:132 [THR] a:20 [C] e:131 [ASN] a:21 [A] ✔
e:124 [LEU] a:7 [G] e:123 [LEU] a:8 [G] ✔
e:124 [LEU] a:8 [G] e:123 [LEU] a:9 [A] ✔
e:22 [ALA] a:16 [G] e:21 [ALA] a:17 [G] ✔
e:22 [ALA] a:17 [A] e:21 [ALA] a:18 [A] ✔
e:22 [ALA] a:1092 [G] e:21 [ALA] a:1078 [G] ✔
e:130 [SER] a:20 [C] e:129 [SER] a:21 [A] ✔
e:125 [SER] a:8 [G] e:124 [ALA] a:9 [A] ✔
e:125 [SER] a:9 [A] e:124 [ALA] a:10 [A] ✔
e:100 [ALA] a:6 [U] e:99 [SER] a:7 [U] ✔
e:52 [LYS] a:1091 [A] e:51 [LYS] a:1077 [A] ✔
e:52 [LYS] a:1092 [G] e:51 [LYS] a:1078 [G] ✔
e:21 [VAL] a:1091 [A] e:20 [VAL] a:1077 [A] ✔
e:21 [VAL] a:1092 [G] e:20 [VAL] a:1078 [G] ✔
e:134 [ILE] a:1089 [U] e:133 [ALA] a:1075 [U] ✔
e:106 [ILE] a:7 [G] e:105 [ILE] a:8 [G] ❌ 7RYG_e_a
e:32 [ARG] a:1091 [A] e:31 [SER] a:1077 [A] ❌ 7RYG_e_a
e:91 [SER] a:19 [C] e:90 [ALA] a:20 [C] ❌ 7RYG_e_a
e:126 [LYS] a:568 [A] e:125 [LYS] a:557 [U] ❌ 7RYG_e_a
e:127 [SER] a:9 [A] e:126 [CYS] a:10 [A] ❌ 7RYG_e_a
e:90 [GLY] a:872 [U] e:89 [GLY] a:860 [U] ❌ 7RYG_e_a
e:131 [ASN] a:20 [C] e:130 [THR] a:21 [A] ❌ 7RYG_e_a
e:97 [LYS] a:6 [U] e:96 [GLN] a:7 [U] ❌ 7RYG_e_a
e:30 [ARG] a:1082 [C] e:29 [ILE] a:1068 [C] ❌ 7RYG_e_a
e:62 [LYS] a:1085 [G] e:61 [LYS] a:1071 [G] ❌ 7RYG_e_a
e:111 [VAL] a:9 [A] e:110 [MET] a:10 [A] ❌ 7RYG_e_a
e:52 [LYS] a:1090 [G] e:51 [LYS] a:1076 [G] ❌ 7RYG_e_a
e:134 [ILE] a:19 [C] e:133 [ALA] a:20 [C] ❌ 7RYG_e_a
e:134 [ILE] a:1090 [G] e:133 [ALA] a:1076 [G] ❌ 7RYG_e_a
e:106 [ILE] a:8 [G] e:105 [ILE] a:9 [A] ❌ 6S0X_e_a
e:106 [ILE] a:9 [A] e:105 [ILE] a:10 [A] ❌ 6S0X_e_a
e:107 [ALA] a:10 [G] e:106 [ALA] a:11 [G] ❌ 6S0X_e_a
e:108 [GLY] a:10 [G] e:107 [GLY] a:11 [G] ❌ 6S0X_e_a
e:111 [VAL] a:10 [G] e:110 [MET] a:11 [G] ❌ 6S0X_e_a
e:125 [SER] a:10 [G] e:124 [ALA] a:11 [G] ❌ 6S0X_e_a
e:126 [LYS] a:10 [G] e:125 [LYS] a:11 [G] ❌ 6S0X_e_a
e:128 [LEU] a:8 [G] e:127 [TYR] a:9 [A] ❌ 6S0X_e_a
e:130 [SER] a:21 [U] e:129 [SER] a:22 [U] ❌ 6S0X_e_a
e:132 [THR] a:1089 [U] e:131 [ASN] a:1075 [U] ❌ 6S0X_e_a
e:135 [ASN] a:19 [C] e:134 [ASN] a:20 [C] ❌ 6S0X_e_a
e:135 [ASN] a:20 [C] e:134 [ASN] a:21 [A] ❌ 6S0X_e_a
e:21 [VAL] a:17 [A] e:20 [VAL] a:18 [A] ❌ 6S0X_e_a
e:22 [ALA] a:1091 [A] e:21 [ALA] a:1077 [A] ❌ 6S0X_e_a
e:23 [LYS] a:16 [G] e:22 [LYS] a:17 [G] ❌ 6S0X_e_a
e:26 [LYS] a:1408 [A] e:25 [LYS] a:1395 [A] ❌ 6S0X_e_a
e:29 [ARG] a:1406 [A] e:28 [ARG] a:1393 [A] ❌ 6S0X_e_a
e:30 [ARG] a:1092 [G] e:29 [ILE] a:1078 [G] ❌ 6S0X_e_a
e:54 [GLN] a:1082 [C] e:53 [ARG] a:1068 [C] ❌ 6S0X_e_a
e:100 [ALA] a:7 [G] e:99 [SER] a:8 [G] ❌ 6S0X_e_a
e:98 [PRO] a:5 [A] e:97 [PRO] a:6 [C] ❌ 7RYG_a:6 no longer at interface
e:126 [LYS] a:566 [G] e:125 [LYS] a:555 [G] ❌ 7RYG_a:555 no longer at interface
e:26 [LYS] a:1398 [U] e:25 [LYS] a:1385 [C] ❌ 7RYG_a:1385 no longer at interface
e:54 [GLN] a:1083 [G] e:53 [ARG] a:1069 [G] ❌ 7RYG_a:1069 no longer at interface
e:97 [LYS] a:5 [A] e:96 [GLN] a:6 [C] ❌ 7RYG_a:6 no longer at interface
e:30 [ARG] a:1083 [G] e:29 [ILE] a:1069 [G] ❌ 7RYG_a:1069 no longer at interface
e:84 [THR] a:5 [A] e:83 [PRO] a:6 [C] ❌ 7RYG_e:83, 7RYG_a:6 no longer at interface
e:52 [LYS] a:1088 [G] e:51 [LYS] a:1074 [G] ❌ 7RYG_a:1074 no longer at interface
e:126 [LYS] a:567 [A] e:125 [LYS] a:556 [A] ❌ 6S0X_a:567 no longer at interface
e:128 [LEU] a:306 [A] e:127 [TYR] a:294 [A] ❌ 6S0X_a:306 no longer at interface
e:131 [ASN] a:11 [A] e:130 [THR] a:12 [A] ❌ 6S0X_a:11 no longer at interface
e:19 [ASN] a:18 [U] e:18 [ASP] a:19 [U] ❌ 6S0X_e:19, 6S0X_a:18 no longer at interface
e:20 [ARG] a:18 [U] e:19 [ARG] a:19 [U] ❌ 6S0X_e:20, 6S0X_a:18 no longer at interface
e:21 [VAL] a:18 [U] e:20 [VAL] a:19 [U] ❌ 6S0X_a:18 no longer at interface
e:25 [VAL] a:1081 [U] e:24 [VAL] a:1067 [U] ❌ 6S0X_a:1081 no longer at interface
e:26 [LYS] a:1203 [G] e:25 [LYS] a:1190 [G] ❌ 6S0X_a:1203 no longer at interface
e:26 [LYS] a:933 [C] e:25 [LYS] a:921 [C] ❌ 6S0X_a:933 no longer at interface
e:27 [GLY] a:1204 [U] e:26 [GLY] a:1191 [U] ❌ 6S0X_e:27, 6S0X_a:1204 no longer at interface
e:27 [GLY] a:1203 [G] e:26 [GLY] a:1190 [G] ❌ 6S0X_e:27, 6S0X_a:1203 no longer at interface
e:29 [ARG] a:1407 [C] e:28 [ARG] a:1394 [C] ❌ 6S0X_a:1407 no longer at interface
e:54 [GLN] a:1081 [U] e:53 [ARG] a:1067 [U] ❌ 6S0X_a:1081 no longer at interface
e:88 [ARG] a:871 [C] e:87 [ARG] a:859 [C] ❌ 6S0X_a:871 no longer at interface
e:109 [GLY] a:9 [A] e:108 [GLY] a:10 [A] ❌ 7RYG_e:108 no longer at interface
e:123 [ILE] a:7 [G] e:122 [VAL] a:8 [G] ❌ 7RYG_e:122 no longer at interface
e:65 [GLU] a:1085 [G] e:64 [GLU] a:1071 [G] ❌ 7RYG_e:64 no longer at interface
e:103 [THR] a:8 [G] e:102 [THR] a:9 [A] ❌ 6S0X_e:103 no longer at interface
e:103 [THR] a:7 [G] e:102 [THR] a:8 [G] ❌ 6S0X_e:103 no longer at interface
e:112 [ARG] a:9 [A] e:111 [ARG] a:10 [A] ❌ 6S0X_e:112 no longer at interface
e:129 [GLY] a:568 [A] e:128 [GLY] a:557 [U] ❌ 6S0X_e:129 no longer at interface
e:20 [ARG] a:17 [A] e:19 [ARG] a:18 [A] ❌ 6S0X_e:20 no longer at interface
e:27 [GLY] a:1408 [A] e:26 [GLY] a:1395 [A] ❌ 6S0X_e:27 no longer at interface
e:28 [GLY] a:1408 [A] e:27 [GLY] a:1395 [A] ❌ 6S0X_e:28 no longer at interface
e:34 [THR] a:1091 [A] e:33 [THR] a:1077 [A] ❌ 6S0X_e:34 no longer at interface
e:50 [THR] a:1090 [G] e:49 [ARG] a:1076 [G] ❌ 6S0X_e:50 no longer at interface
e:50 [THR] a:1091 [A] e:49 [ARG] a:1077 [A] ❌ 6S0X_e:50 no longer at interface
e:92 [GLY] a:20 [C] e:91 [SER] a:21 [A] ❌ 6S0X_e:92 no longer at interface
e:93 [SER] a:568 [A] e:92 [ARG] a:557 [U] ❌ 6S0X_e:93 no longer at interface
e:95 [PHE] a:8 [G] e:94 [TYR] a:9 [A] ❌ 6S0X_e:95 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA 0.97 1.64 0.50 0.91 0.96 0.9 0.84 0.59 0.43 0.09 0.53


Other pairs involving 6S0X_e_a or 7RYG_e_a

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0X_e_a 7O7Y_Ab_A2 0.44 0.89 2.76 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
6S0X_e_a 7RYG_e_a 0.59 0.97 1.64 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
6S0X_e_a 7K00_E_A 0.57 0.96 2.44 0.47 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
6S0X_e_a 7O7Z_Ab_A2 0.44 0.89 2.76 0.2 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
7K00_E_A 7RYG_e_a 0.91 0.94 1.67 0.75 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 6S0X_e_a 0.59 0.96 2.62 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7RYG_e_a 0.81 0.92 2.08 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare