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All interfaces > All interologs > Interface groups > group102 > 4Y4O_1k_1a vs 7O7Y_An_A2

Interface analysis


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Common contacts -

4Y4O_1k
4Y4O_1a
7O7Y_An
7O7Y_A2
Conserved?
1k:20 [TYR] 1a:707 [C] An:32 [HIS] A2:976 [G] ✔
1k:20 [TYR] 1a:708 [C] An:32 [HIS] A2:977 [G] ✔
1k:45 [GLY] 1a:689 [C] An:58 [GLY] A2:958 [A] ✔
1k:39 [PRO] 1a:684 [A] An:52 [THR] A2:953 [G] ✔
1k:39 [PRO] 1a:685 [G] An:52 [THR] A2:954 [C] ✔
1k:39 [PRO] 1a:707 [C] An:52 [THR] A2:976 [G] ✔
1k:36 [ASP] 1a:708 [C] An:49 [GLY] A2:977 [G] ✔
1k:46 [GLY] 1a:688 [G] An:59 [GLY] A2:957 [G] ✔
1k:46 [GLY] 1a:689 [C] An:59 [GLY] A2:958 [A] ✔
1k:31 [THR] 1a:706 [A] An:43 [HIS] A2:975 [C] ✔
1k:31 [THR] 1a:707 [C] An:43 [HIS] A2:976 [G] ✔
1k:52 [GLY] 1a:691 [G] An:65 [ASP] A2:960 [G] ✔
1k:52 [GLY] 1a:692 [U] An:65 [ASP] A2:961 [U] ✔
1k:52 [GLY] 1a:695 [A] An:65 [ASP] A2:964 [A] ✔
1k:114 [VAL] 1a:675 [A] An:135 [ILE] A2:944 [U] ✔
1k:114 [VAL] 1a:676 [A] An:135 [ILE] A2:945 [A] ✔
1k:114 [VAL] 1a:718 [G] An:135 [ILE] A2:987 [G] ✔
1k:47 [VAL] 1a:687 [A] An:60 [MET] A2:956 [A] ✔
1k:47 [VAL] 1a:688 [G] An:60 [MET] A2:957 [G] ✔
1k:47 [VAL] 1a:689 [C] An:60 [MET] A2:958 [A] ✔
1k:118 [GLY] 1a:676 [A] An:139 [SER] A2:945 [A] ✔
1k:118 [GLY] 1a:715 [A] An:139 [SER] A2:984 [A] ✔
1k:118 [GLY] 1a:716 [A] An:139 [SER] A2:985 [C] ✔
1k:55 [LYS] 1a:689 [C] An:68 [GLU] A2:958 [A] ✔
1k:55 [LYS] 1a:690 [G] An:68 [GLU] A2:959 [G] ✔
1k:55 [LYS] 1a:691 [G] An:68 [GLU] A2:960 [G] ✔
1k:116 [HIS] 1a:674 [G] An:137 [SER] A2:943 [G] ✔
1k:116 [HIS] 1a:675 [A] An:137 [SER] A2:944 [U] ✔
1k:116 [HIS] 1a:716 [A] An:137 [SER] A2:985 [C] ✔
1k:116 [HIS] 1a:717 [C] An:137 [SER] A2:986 [G] ✔
1k:116 [HIS] 1a:718 [G] An:137 [SER] A2:987 [G] ✔
1k:26 [ASN] 1a:690 [G] An:38 [ASN] A2:959 [G] ✔
1k:26 [ASN] 1a:691 [G] An:38 [ASN] A2:960 [G] ✔
1k:26 [ASN] 1a:692 [U] An:38 [ASN] A2:961 [U] ✔
1k:53 [SER] 1a:692 [U] An:66 [ARG] A2:961 [U] ✔
1k:53 [SER] 1a:694 [A] An:66 [ARG] A2:963 [A] ✔
1k:53 [SER] 1a:695 [A] An:66 [ARG] A2:964 [A] ✔
1k:40 [ILE] 1a:685 [G] An:53 [ILE] A2:954 [C] ✔
1k:85 [ARG] 1a:706 [A] An:98 [ARG] A2:975 [C] ✔
1k:85 [ARG] 1a:707 [C] An:98 [ARG] A2:976 [G] ✔
1k:37 [GLY] 1a:683 [G] An:50 [LYS] A2:952 [C] ✔
1k:37 [GLY] 1a:707 [C] An:50 [LYS] A2:976 [G] ✔
1k:37 [GLY] 1a:708 [C] An:50 [LYS] A2:977 [G] ✔
1k:122 [LYS] 1a:779 [C] An:143 [LYS] A2:1048 [C] ✔
1k:122 [LYS] 1a:780 [A] An:143 [LYS] A2:1049 [G] ✔
1k:122 [LYS] 1a:798 [G] An:143 [LYS] A2:1067 [U] ✔
1k:115 [PRO] 1a:675 [A] An:136 [PRO] A2:944 [U] ✔
1k:115 [PRO] 1a:676 [A] An:136 [PRO] A2:945 [A] ✔
1k:115 [PRO] 1a:718 [G] An:136 [PRO] A2:987 [G] ✔
1k:120 [ARG] 1a:778 [G] An:141 [ARG] A2:1047 [PSU] ✔
1k:120 [ARG] 1a:779 [C] An:141 [ARG] A2:1048 [C] ✔
1k:120 [ARG] 1a:1524 [C] An:141 [ARG] A2:1857 [C] ✔
1k:120 [ARG] 1a:1525 [G] An:141 [ARG] A2:1858 [G] ✔
1k:117 [ASN] 1a:675 [A] An:138 [ASP] A2:944 [U] ✔
1k:117 [ASN] 1a:716 [A] An:138 [ASP] A2:985 [C] ✔
1k:117 [ASN] 1a:717 [C] An:138 [ASP] A2:986 [G] ✔
1k:117 [ASN] 1a:718 [G] An:138 [ASP] A2:987 [G] ✔
1k:27 [ASN] 1a:688 [G] An:39 [ASP] A2:957 [G] ✔
1k:27 [ASN] 1a:689 [C] An:39 [ASP] A2:958 [A] ✔
1k:27 [ASN] 1a:690 [G] An:39 [ASP] A2:959 [G] ✔
1k:24 [SER] 1a:690 [G] An:36 [SER] A2:959 [G] ✔
1k:22 [HIS] 1a:706 [A] An:34 [PHE] A2:975 [C] ✔
1k:38 [ASN] 1a:683 [G] An:51 [GLU] A2:952 [C] ✔
1k:38 [ASN] 1a:684 [A] An:51 [GLU] A2:953 [G] ✔
1k:113 [PRO] 1a:676 [A] An:134 [PRO] A2:945 [A] ✔
1k:113 [PRO] 1a:677 [U] An:134 [PRO] A2:946 [U] ✔
1k:44 [SER] 1a:688 [G] An:57 [THR] A2:957 [G] ✔
1k:44 [SER] 1a:689 [C] An:57 [THR] A2:958 [A] ✔
1k:123 [LYS] 1a:779 [C] An:144 [GLY] A2:1048 [C] ✔
1k:123 [LYS] 1a:780 [A] An:144 [GLY] A2:1049 [G] ✔
1k:123 [LYS] 1a:1523 [G] An:144 [GLY] A2:1856 [G] ✔
1k:119 [CYS] 1a:676 [A] An:140 [THR] A2:945 [A] ✔
1k:119 [CYS] 1a:677 [U] An:140 [THR] A2:946 [U] ✔
1k:119 [CYS] 1a:714 [G] An:140 [THR] A2:983 [G] ✔
1k:119 [CYS] 1a:715 [A] An:140 [THR] A2:984 [A] ✔
1k:119 [CYS] 1a:777 [A] An:140 [THR] A2:1046 [PSU] ✔
1k:119 [CYS] 1a:778 [G] An:140 [THR] A2:1047 [PSU] ✔
1k:51 [LYS] 1a:695 [A] An:64 [ALA] A2:964 [A] ✔
1k:33 [THR] 1a:707 [C] An:45 [THR] A2:976 [G] ✔
1k:42 [TRP] 1a:685 [G] An:55 [ARG] A2:954 [C] ✔
1k:42 [TRP] 1a:686 [U] An:55 [ARG] A2:955 [U] ✔
1k:42 [TRP] 1a:704 [A] An:55 [ARG] A2:973 [A] ✔
1k:42 [TRP] 1a:705 [U] An:55 [ARG] A2:974 [C] ✔
1k:42 [TRP] 1a:706 [A] An:55 [ARG] A2:975 [C] ✔
1k:29 [ILE] 1a:689 [C] An:41 [PHE] A2:958 [A] ✔
1k:29 [ILE] 1a:690 [G] An:41 [PHE] A2:959 [G] ✔
1k:29 [ILE] 1a:705 [U] An:41 [PHE] A2:974 [C] ✔
1k:29 [ILE] 1a:706 [A] An:41 [PHE] A2:975 [C] ✔
1k:121 [PRO] 1a:778 [G] An:142 [ARG] A2:1047 [PSU] ✔
1k:121 [PRO] 1a:779 [C] An:142 [ARG] A2:1048 [C] ✔
1k:20 [TYR] 1a:706 [A] An:32 [HIS] A2:975 [C] ❌ 7O7Y_An_A2
1k:39 [PRO] 1a:683 [G] An:52 [THR] A2:952 [C] ❌ 7O7Y_An_A2
1k:39 [PRO] 1a:706 [A] An:52 [THR] A2:975 [C] ❌ 7O7Y_An_A2
1k:126 [ARG] 1a:1524 [C] An:148 [GLY] A2:1857 [C] ❌ 7O7Y_An_A2
1k:126 [ARG] 1a:1525 [G] An:148 [GLY] A2:1858 [G] ❌ 7O7Y_An_A2
1k:124 [LYS] 1a:692 [U] An:145 [GLY] A2:961 [U] ❌ 7O7Y_An_A2
1k:124 [LYS] 1a:797 [C] An:145 [GLY] A2:1066 [G] ❌ 7O7Y_An_A2
1k:118 [GLY] 1a:675 [A] An:139 [SER] A2:944 [U] ❌ 7O7Y_An_A2
1k:53 [SER] 1a:691 [G] An:66 [ARG] A2:960 [G] ❌ 7O7Y_An_A2
1k:40 [ILE] 1a:684 [A] An:53 [ILE] A2:953 [G] ❌ 7O7Y_An_A2
1k:40 [ILE] 1a:686 [U] An:53 [ILE] A2:955 [U] ❌ 7O7Y_An_A2
1k:85 [ARG] 1a:708 [C] An:98 [ARG] A2:977 [G] ❌ 7O7Y_An_A2
1k:24 [SER] 1a:691 [G] An:36 [SER] A2:960 [G] ❌ 7O7Y_An_A2
1k:22 [HIS] 1a:690 [G] An:34 [PHE] A2:959 [G] ❌ 7O7Y_An_A2
1k:22 [HIS] 1a:707 [C] An:34 [PHE] A2:976 [G] ❌ 7O7Y_An_A2
1k:38 [ASN] 1a:707 [C] An:51 [GLU] A2:976 [G] ❌ 7O7Y_An_A2
1k:38 [ASN] 1a:708 [C] An:51 [GLU] A2:977 [G] ❌ 7O7Y_An_A2
1k:123 [LYS] 1a:795 [C] An:144 [GLY] A2:1064 [C] ❌ 7O7Y_An_A2
1k:123 [LYS] 1a:796 [C] An:144 [GLY] A2:1065 [C] ❌ 7O7Y_An_A2
1k:123 [LYS] 1a:1522 [U] An:144 [GLY] A2:1855 [U] ❌ 7O7Y_An_A2
1k:51 [LYS] 1a:691 [G] An:64 [ALA] A2:960 [G] ❌ 7O7Y_An_A2
1k:42 [TRP] 1a:687 [A] An:55 [ARG] A2:956 [A] ❌ 7O7Y_An_A2
1k:42 [TRP] 1a:688 [G] An:55 [ARG] A2:957 [G] ❌ 7O7Y_An_A2
1k:116 [HIS] 1a:676 [A] An:137 [SER] A2:945 [A] ❌ 4Y4O_1k_1a
1k:117 [ASN] 1a:674 [G] An:138 [ASP] A2:943 [G] ❌ 4Y4O_1k_1a
1k:117 [ASN] 1a:715 [A] An:138 [ASP] A2:984 [A] ❌ 4Y4O_1k_1a
1k:122 [LYS] 1a:797 [C] An:143 [LYS] A2:1066 [G] ❌ 4Y4O_1k_1a
1k:124 [LYS] 1a:780 [A] An:145 [GLY] A2:1049 [G] ❌ 4Y4O_1k_1a
1k:124 [LYS] 1a:1524 [C] An:145 [GLY] A2:1857 [C] ❌ 4Y4O_1k_1a
1k:124 [LYS] 1a:779 [C] An:145 [GLY] A2:1048 [C] ❌ 4Y4O_1k_1a
1k:124 [LYS] 1a:1523 [G] An:145 [GLY] A2:1856 [G] ❌ 4Y4O_1k_1a
1k:126 [ARG] 1a:796 [C] An:148 [GLY] A2:1065 [C] ❌ 4Y4O_1k_1a
1k:31 [THR] 1a:684 [A] An:43 [HIS] A2:953 [G] ❌ 4Y4O_1k_1a
1k:36 [ASP] 1a:707 [C] An:49 [GLY] A2:976 [G] ❌ 4Y4O_1k_1a
1k:37 [GLY] 1a:684 [A] An:50 [LYS] A2:953 [G] ❌ 4Y4O_1k_1a
1k:38 [ASN] 1a:685 [G] An:51 [GLU] A2:954 [C] ❌ 4Y4O_1k_1a
1k:42 [TRP] 1a:684 [A] An:55 [ARG] A2:953 [G] ❌ 4Y4O_1k_1a
1k:52 [GLY] 1a:690 [G] An:65 [ASP] A2:959 [G] ❌ 4Y4O_1k_1a
1k:122 [LYS] 1a:799 [G] An:143 [LYS] A2:1068 [C] ❌ 7O7Y_A2:1068 no longer at interface
1k:125 [PHE] 1a:1526 [G] An:146 [ARG] A2:1859 [G] ❌ 4Y4O_1k:125, 4Y4O_1a:1526 no longer at interface
1k:52 [GLY] 1a:696 [A] An:65 [ASP] A2:965 [A] ❌ 4Y4O_1a:696 no longer at interface
1k:53 [SER] 1a:693 [G] An:66 [ARG] A2:962 [G] ❌ 4Y4O_1a:693 no longer at interface
1k:41 [THR] 1a:685 [G] An:54 [CYS] A2:954 [C] ❌ 7O7Y_An:54 no longer at interface
1k:18 [ARG] 1a:708 [C] An:30 [VAL] A2:977 [G] ❌ 7O7Y_An:30 no longer at interface
1k:71 [LYS] 1a:687 [A] An:84 [ARG] A2:956 [A] ❌ 7O7Y_An:84 no longer at interface
1k:111 [ASP] 1a:708 [C] An:132 [VAL] A2:977 [G] ❌ 7O7Y_An:132 no longer at interface
1k:50 [TYR] 1a:689 [C] An:63 [LYS] A2:958 [A] ❌ 7O7Y_An:63 no longer at interface
1k:125 [PHE] 1a:1524 [C] An:146 [ARG] A2:1857 [C] ❌ 4Y4O_1k:125 no longer at interface
1k:125 [PHE] 1a:1525 [G] An:146 [ARG] A2:1858 [G] ❌ 4Y4O_1k:125 no longer at interface
1k:35 [PRO] 1a:708 [C] An:48 [SER] A2:977 [G] ❌ 4Y4O_1k:35 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like 0.93 2.71 0.26 0.91 0.93 0.86 0.97 0.80 0.80 0.39 0.24


Other pairs involving 4Y4O_1k_1a or 7O7Y_An_A2

Total number of entries: 8

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4YBB_AK_AA 7O7Y_An_A2 0.59 0.9 4.01 0.21 Ribonuclease H-like compare
4Y4O_1k_1a 4YBB_AK_AA 0.62 0.96 3.51 0.4 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
4Y4O_1k_1a 6S0X_k_a 0.73 0.95 2.43 0.62 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
4Y4O_1k_1a 7O7Y_An_A2 0.80 0.93 2.71 0.26 Ribonuclease H-like compare
4Y4O_1k_1a 7K00_K_A 0.84 0.98 1.34 0.63 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
4Y4O_1k_1a 7RYG_k_a 0.83 0.92 2.81 0.62 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
7K00_K_A 7O7Y_An_A2 0.86 0.92 2.19 0.32 Ribonuclease H-like compare
6S0X_k_a 7O7Y_An_A2 0.73 0.9 4.43 0.24 Ribonuclease H-like compare