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All interfaces > All interologs > Interface groups > group102 > 4YBB_AK_AA vs 7K00_K_A

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Common contacts -

4YBB_AK
4YBB_AA
7K00_K
7K00_A
Conserved?
AK:24 [HIS] AA:690 [G] K:24 [HIS] A:690 [G] ✔
AK:24 [HIS] AA:706 [A] K:24 [HIS] A:706 [A] ✔
AK:24 [HIS] AA:707 [U] K:24 [HIS] A:707 [U] ✔
AK:128 [ARG] AA:795 [C] K:128 [ARG] A:795 [C] ✔
AK:128 [ARG] AA:796 [C] K:128 [ARG] A:796 [C] ✔
AK:128 [ARG] AA:1506 [U] K:128 [ARG] A:1506 [U] ✔
AK:128 [ARG] AA:1522 [U] K:128 [ARG] A:1522 [U] ✔
AK:128 [ARG] AA:1523 [G] K:128 [ARG] A:1523 [G] ✔
AK:26 [SER] AA:690 [G] K:26 [SER] A:690 [G] ✔
AK:26 [SER] AA:691 [G] K:26 [SER] A:691 [G] ✔
AK:125 [LYS] AA:779 [C] K:125 [LYS] A:779 [C] ✔
AK:125 [LYS] AA:780 [A] K:125 [LYS] A:780 [A] ✔
AK:125 [LYS] AA:1523 [G] K:125 [LYS] A:1523 [G] ✔
AK:47 [ALA] AA:689 [C] K:47 [ALA] A:689 [C] ✔
AK:126 [LYS] AA:796 [C] K:126 [LYS] A:796 [C] ✔
AK:54 [GLY] AA:691 [G] K:54 [GLY] A:691 [G] ✔
AK:54 [GLY] AA:692 [U] K:54 [GLY] A:692 [U] ✔
AK:54 [GLY] AA:694 [A] K:54 [GLY] A:694 [A] ✔
AK:54 [GLY] AA:695 [A] K:54 [GLY] A:695 [A] ✔
AK:57 [LYS] AA:689 [C] K:57 [LYS] A:689 [C] ✔
AK:57 [LYS] AA:691 [G] K:57 [LYS] A:691 [G] ✔
AK:57 [LYS] AA:692 [U] K:57 [LYS] A:692 [U] ✔
AK:53 [ARG] AA:689 [C] K:53 [ARG] A:689 [C] ✔
AK:53 [ARG] AA:690 [G] K:53 [ARG] A:690 [G] ✔
AK:53 [ARG] AA:691 [G] K:53 [ARG] A:691 [G] ✔
AK:53 [ARG] AA:695 [A] K:53 [ARG] A:695 [A] ✔
AK:87 [LYS] AA:707 [U] K:87 [LYS] A:707 [U] ✔
AK:117 [PRO] AA:675 [A] K:117 [PRO] A:675 [A] ✔
AK:117 [PRO] AA:676 [A] K:117 [PRO] A:676 [A] ✔
AK:117 [PRO] AA:718 [A] K:117 [PRO] A:718 [A] ✔
AK:48 [GLY] AA:688 [G] K:48 [GLY] A:688 [G] ✔
AK:48 [GLY] AA:689 [C] K:48 [GLY] A:689 [C] ✔
AK:121 [CYS] AA:778 [G] K:122 [ARG] A:778 [G] ✔
AK:49 [GLY] AA:688 [G] K:49 [GLY] A:688 [G] ✔
AK:49 [GLY] AA:689 [C] K:49 [GLY] A:689 [C] ✔
AK:77 [TYR] AA:685 [G] K:77 [TYR] A:685 [G] ✔
AK:119 [ASN] AA:675 [A] K:120 [GLY] A:675 [A] ✔
AK:119 [ASN] AA:716 [A] K:120 [GLY] A:716 [A] ✔
AK:28 [ASN] AA:691 [G] K:28 [ASN] A:691 [G] ✔
AK:28 [ASN] AA:692 [U] K:28 [ASN] A:692 [U] ✔
AK:40 [ASN] AA:683 [G] K:40 [ASN] A:683 [G] ✔
AK:40 [ASN] AA:684 [U] K:40 [ASN] A:684 [U] ✔
AK:40 [ASN] AA:707 [U] K:40 [ASN] A:707 [U] ✔
AK:38 [GLN] AA:708 [C] K:38 [GLN] A:708 [C] ✔
AK:115 [PRO] AA:676 [A] K:115 [PRO] A:676 [A] ✔
AK:115 [PRO] AA:677 [U] K:115 [PRO] A:677 [U] ✔
AK:127 [ARG] AA:692 [U] K:127 [ARG] A:692 [U] ✔
AK:127 [ARG] AA:693 [G] K:127 [ARG] A:693 [G] ✔
AK:127 [ARG] AA:796 [C] K:127 [ARG] A:796 [C] ✔
AK:127 [ARG] AA:797 [C] K:127 [ARG] A:797 [C] ✔
AK:39 [GLY] AA:683 [G] K:39 [GLY] A:683 [G] ✔
AK:39 [GLY] AA:684 [U] K:39 [GLY] A:684 [U] ✔
AK:39 [GLY] AA:707 [U] K:39 [GLY] A:707 [U] ✔
AK:39 [GLY] AA:708 [C] K:39 [GLY] A:708 [C] ✔
AK:55 [SER] AA:694 [A] K:55 [SER] A:694 [A] ✔
AK:55 [SER] AA:695 [A] K:55 [SER] A:695 [A] ✔
AK:46 [THR] AA:688 [G] K:46 [THR] A:688 [G] ✔
AK:46 [THR] AA:689 [C] K:46 [THR] A:689 [C] ✔
AK:46 [THR] AA:705 [G] K:46 [THR] A:705 [G] ✔
AK:22 [HIS] AA:706 [A] K:22 [HIS] A:706 [A] ✔
AK:22 [HIS] AA:707 [U] K:22 [HIS] A:707 [U] ✔
AK:22 [HIS] AA:708 [C] K:22 [HIS] A:708 [C] ✔
AK:41 [ALA] AA:683 [G] K:41 [ALA] A:683 [G] ✔
AK:41 [ALA] AA:684 [U] K:41 [ALA] A:684 [U] ✔
AK:41 [ALA] AA:685 [G] K:41 [ALA] A:685 [G] ✔
AK:41 [ALA] AA:706 [A] K:41 [ALA] A:706 [A] ✔
AK:44 [TRP] AA:685 [G] K:44 [TRP] A:685 [G] ✔
AK:44 [TRP] AA:686 [U] K:44 [TRP] A:686 [U] ✔
AK:44 [TRP] AA:687 [A] K:44 [TRP] A:687 [A] ✔
AK:44 [TRP] AA:688 [G] K:44 [TRP] A:688 [G] ✔
AK:44 [TRP] AA:704 [A] K:44 [TRP] A:704 [A] ✔
AK:44 [TRP] AA:705 [G] K:44 [TRP] A:705 [G] ✔
AK:123 [PRO] AA:779 [C] K:124 [PRO] A:779 [C] ✔
AK:122 [ARG] AA:778 [G] K:123 [PRO] A:778 [G] ✔
AK:122 [ARG] AA:779 [C] K:123 [PRO] A:779 [C] ✔
AK:120 [GLY] AA:676 [A] K:121 [CYS] A:676 [A] ✔
AK:118 [HIS] AA:674 [G] K:118 [HIS] A:674 [G] ✔
AK:118 [HIS] AA:675 [A] K:118 [HIS] A:675 [A] ✔
AK:118 [HIS] AA:716 [A] K:118 [HIS] A:716 [A] ✔
AK:118 [HIS] AA:717 [U] K:118 [HIS] A:717 [U] ✔
AK:118 [HIS] AA:718 [A] K:118 [HIS] A:718 [A] ✔
AK:116 [ILE] AA:675 [A] K:116 [ILE] A:675 [A] ✔
AK:116 [ILE] AA:676 [A] K:116 [ILE] A:676 [A] ✔
AK:116 [ILE] AA:718 [A] K:116 [ILE] A:718 [A] ✔
AK:42 [LEU] AA:684 [U] K:42 [LEU] A:684 [U] ✔
AK:42 [LEU] AA:685 [G] K:42 [LEU] A:685 [G] ✔
AK:129 [VAL] AA:693 [G] K:129 [VAL] A:693 [G] ✔
AK:129 [VAL] AA:795 [C] K:129 [VAL] A:795 [C] ✔
AK:129 [VAL] AA:796 [C] K:129 [VAL] A:796 [C] ✔
AK:129 [VAL] AA:1506 [U] K:129 [VAL] A:1506 [U] ✔
AK:129 [VAL] AA:1507 [A] K:129 [VAL] A:1507 [A] ✔
AK:125 [LYS] AA:1524 [C] K:125 [LYS] A:1524 [C] ❌ 7K00_K_A
AK:57 [LYS] AA:690 [G] K:57 [LYS] A:690 [G] ❌ 7K00_K_A
AK:87 [LYS] AA:708 [C] K:87 [LYS] A:708 [C] ❌ 7K00_K_A
AK:121 [CYS] AA:676 [A] K:122 [ARG] A:676 [A] ❌ 7K00_K_A
AK:121 [CYS] AA:677 [U] K:122 [ARG] A:677 [U] ❌ 7K00_K_A
AK:121 [CYS] AA:714 [G] K:122 [ARG] A:714 [G] ❌ 7K00_K_A
AK:121 [CYS] AA:777 [A] K:122 [ARG] A:777 [A] ❌ 7K00_K_A
AK:119 [ASN] AA:717 [U] K:120 [GLY] A:717 [U] ❌ 7K00_K_A
AK:119 [ASN] AA:718 [A] K:120 [GLY] A:718 [A] ❌ 7K00_K_A
AK:41 [ALA] AA:707 [U] K:41 [ALA] A:707 [U] ❌ 7K00_K_A
AK:123 [PRO] AA:778 [G] K:124 [PRO] A:778 [G] ❌ 7K00_K_A
AK:122 [ARG] AA:1524 [C] K:123 [PRO] A:1524 [C] ❌ 7K00_K_A
AK:122 [ARG] AA:1525 [G] K:123 [PRO] A:1525 [G] ❌ 7K00_K_A
AK:120 [GLY] AA:675 [A] K:121 [CYS] A:675 [A] ❌ 7K00_K_A
AK:120 [GLY] AA:715 [A] K:121 [CYS] A:715 [A] ❌ 7K00_K_A
AK:120 [GLY] AA:716 [A] K:121 [CYS] A:716 [A] ❌ 7K00_K_A
AK:118 [HIS] AA:676 [A] K:118 [HIS] A:676 [A] ❌ 4YBB_AK_AA
AK:119 [ASN] AA:715 [A] K:120 [GLY] A:715 [A] ❌ 4YBB_AK_AA
AK:119 [ASN] AA:676 [A] K:120 [GLY] A:676 [A] ❌ 4YBB_AK_AA
AK:120 [GLY] AA:778 [G] K:121 [CYS] A:778 [G] ❌ 4YBB_AK_AA
AK:120 [GLY] AA:777 [A] K:121 [CYS] A:777 [A] ❌ 4YBB_AK_AA
AK:120 [GLY] AA:677 [U] K:121 [CYS] A:677 [U] ❌ 4YBB_AK_AA
AK:120 [GLY] AA:714 [G] K:121 [CYS] A:714 [G] ❌ 4YBB_AK_AA
AK:121 [CYS] AA:1524 [C] K:122 [ARG] A:1524 [C] ❌ 4YBB_AK_AA
AK:121 [CYS] AA:779 [C] K:122 [ARG] A:779 [C] ❌ 4YBB_AK_AA
AK:121 [CYS] AA:1525 [G] K:122 [ARG] A:1525 [G] ❌ 4YBB_AK_AA
AK:123 [PRO] AA:780 [A] K:124 [PRO] A:780 [A] ❌ 4YBB_AK_AA
AK:125 [LYS] AA:1522 [U] K:125 [LYS] A:1522 [U] ❌ 4YBB_AK_AA
AK:125 [LYS] AA:796 [C] K:125 [LYS] A:796 [C] ❌ 4YBB_AK_AA
AK:28 [ASN] AA:690 [G] K:28 [ASN] A:690 [G] ❌ 4YBB_AK_AA
AK:125 [LYS] AA:781 [A] K:125 [LYS] A:781 [A] ❌ 4YBB_AA:781 no longer at interface
AK:128 [ARG] AA:1521 [C] K:128 [ARG] A:1521 [C] ❌ 4YBB_AA:1521 no longer at interface
AK:43 [GLY] AA:685 [G] K:43 [GLY] A:685 [G] ❌ 7K00_K:43 no longer at interface
AK:13 [ARG] AA:685 [G] K:13 [ARG] A:685 [G] ❌ 7K00_K:13 no longer at interface
AK:13 [ARG] AA:686 [U] K:13 [ARG] A:686 [U] ❌ 7K00_K:13 no longer at interface
AK:35 [THR] AA:707 [U] K:34 [ILE] A:707 [U] ❌ 7K00_K:34 no longer at interface
AK:85 [MET] AA:708 [C] K:85 [MET] A:708 [C] ❌ 7K00_K:85 no longer at interface
AK:33 [THR] AA:706 [A] K:32 [VAL] A:706 [A] ❌ 7K00_K:32 no longer at interface
AK:33 [THR] AA:707 [U] K:32 [VAL] A:707 [U] ❌ 7K00_K:32 no longer at interface
AK:31 [ILE] AA:689 [C] K:30 [THR] A:689 [C] ❌ 7K00_K:30 no longer at interface
AK:31 [ILE] AA:690 [G] K:30 [THR] A:690 [G] ❌ 7K00_K:30 no longer at interface
AK:31 [ILE] AA:705 [G] K:30 [THR] A:705 [G] ❌ 7K00_K:30 no longer at interface
AK:31 [ILE] AA:706 [A] K:30 [THR] A:706 [A] ❌ 7K00_K:30 no longer at interface
AK:30 [THR] AA:689 [C] K:29 [ASN] A:689 [C] ❌ 4YBB_AK:30 no longer at interface
AK:30 [THR] AA:690 [G] K:29 [ASN] A:690 [G] ❌ 4YBB_AK:30 no longer at interface
AK:30 [THR] AA:688 [G] K:29 [ASN] A:688 [G] ❌ 4YBB_AK:30 no longer at interface
AK:32 [VAL] AA:689 [C] K:31 [ILE] A:689 [C] ❌ 4YBB_AK:32 no longer at interface
AK:32 [VAL] AA:690 [G] K:31 [ILE] A:690 [G] ❌ 4YBB_AK:32 no longer at interface
AK:32 [VAL] AA:706 [A] K:31 [ILE] A:706 [A] ❌ 4YBB_AK:32 no longer at interface
AK:32 [VAL] AA:705 [G] K:31 [ILE] A:705 [G] ❌ 4YBB_AK:32 no longer at interface
AK:34 [ILE] AA:707 [U] K:33 [THR] A:707 [U] ❌ 4YBB_AK:34 no longer at interface
AK:34 [ILE] AA:706 [A] K:33 [THR] A:706 [A] ❌ 4YBB_AK:34 no longer at interface
AK:34 [ILE] AA:705 [G] K:33 [THR] A:705 [G] ❌ 4YBB_AK:34 no longer at interface
AK:36 [ASP] AA:707 [U] K:35 [THR] A:707 [U] ❌ 4YBB_AK:36 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like Bacterial small subunit ribosomal RNA 0.98 2.98 0.79 0.99 0.98 0.89 1.0 0.74 0.73 0.56 0.44


Other pairs involving 4YBB_AK_AA or 7K00_K_A

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1k_1a 4YBB_AK_AA 0.62 0.96 3.51 0.4 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
4Y4O_1k_1a 7K00_K_A 0.84 0.98 1.34 0.63 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
4YBB_AK_AA 7K00_K_A 0.74 0.98 2.98 0.79 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
4YBB_AK_AA 7O7Y_An_A2 0.59 0.9 4.01 0.21 Ribonuclease H-like compare
4YBB_AK_AA 7RYG_k_a 0.92 0.97 1.43 0.97 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
4YBB_AK_AA 6S0X_k_a 0.38 0.96 4.28 0.32 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
6S0X_k_a 7K00_K_A 0.76 0.96 3.11 0.7 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
7K00_K_A 7RYG_k_a 0.93 0.93 2.33 0.95 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
7K00_K_A 7O7Y_An_A2 0.86 0.92 2.19 0.32 Ribonuclease H-like compare