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All interfaces > All interologs > Interface groups > group102 > 4YBB_AK_AA vs 7RYG_k_a

Interface analysis


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Common contacts -

4YBB_AK
4YBB_AA
7RYG_k
7RYG_a
Conserved?
AK:24 [HIS] AA:706 [A] k:23 [HIS] a:703 [A] ✔
AK:24 [HIS] AA:707 [U] k:23 [HIS] a:704 [U] ✔
AK:128 [ARG] AA:795 [C] k:127 [ARG] a:792 [C] ✔
AK:128 [ARG] AA:796 [C] k:127 [ARG] a:793 [C] ✔
AK:128 [ARG] AA:1506 [U] k:127 [ARG] a:1503 [U] ✔
AK:128 [ARG] AA:1522 [U] k:127 [ARG] a:1519 [U] ✔
AK:128 [ARG] AA:1523 [G] k:127 [ARG] a:1520 [G] ✔
AK:26 [SER] AA:690 [G] k:25 [SER] a:687 [G] ✔
AK:125 [LYS] AA:779 [C] k:124 [LYS] a:776 [C] ✔
AK:125 [LYS] AA:780 [A] k:124 [LYS] a:777 [A] ✔
AK:125 [LYS] AA:1523 [G] k:124 [LYS] a:1520 [G] ✔
AK:124 [PRO] AA:779 [C] k:123 [PRO] a:776 [C] ✔
AK:124 [PRO] AA:780 [A] k:123 [PRO] a:777 [A] ✔
AK:47 [ALA] AA:689 [C] k:46 [SER] a:686 [C] ✔
AK:126 [LYS] AA:796 [C] k:125 [LYS] a:793 [C] ✔
AK:54 [GLY] AA:691 [G] k:53 [GLY] a:688 [G] ✔
AK:54 [GLY] AA:692 [U] k:53 [GLY] a:689 [U] ✔
AK:54 [GLY] AA:695 [A] k:53 [GLY] a:692 [A] ✔
AK:57 [LYS] AA:689 [C] k:56 [LYS] a:686 [C] ✔
AK:57 [LYS] AA:690 [G] k:56 [LYS] a:687 [G] ✔
AK:57 [LYS] AA:691 [G] k:56 [LYS] a:688 [G] ✔
AK:53 [ARG] AA:695 [A] k:52 [ARG] a:692 [A] ✔
AK:29 [ASN] AA:689 [C] k:28 [ASN] a:686 [C] ✔
AK:29 [ASN] AA:690 [G] k:28 [ASN] a:687 [G] ✔
AK:87 [LYS] AA:707 [U] k:86 [LYS] a:704 [U] ✔
AK:117 [PRO] AA:675 [A] k:116 [PRO] a:672 [A] ✔
AK:117 [PRO] AA:676 [A] k:116 [PRO] a:673 [A] ✔
AK:117 [PRO] AA:718 [A] k:116 [PRO] a:715 [A] ✔
AK:48 [GLY] AA:688 [G] k:47 [GLY] a:685 [G] ✔
AK:48 [GLY] AA:689 [C] k:47 [GLY] a:686 [C] ✔
AK:121 [CYS] AA:676 [A] k:120 [CYS] a:673 [A] ✔
AK:121 [CYS] AA:677 [U] k:120 [CYS] a:674 [U] ✔
AK:121 [CYS] AA:714 [G] k:120 [CYS] a:711 [G] ✔
AK:121 [CYS] AA:777 [A] k:120 [CYS] a:774 [A] ✔
AK:121 [CYS] AA:778 [G] k:120 [CYS] a:775 [G] ✔
AK:49 [GLY] AA:688 [G] k:48 [GLY] a:685 [G] ✔
AK:119 [ASN] AA:675 [A] k:118 [ASN] a:672 [A] ✔
AK:119 [ASN] AA:716 [A] k:118 [ASN] a:713 [A] ✔
AK:119 [ASN] AA:717 [U] k:118 [ASN] a:714 [U] ✔
AK:119 [ASN] AA:718 [A] k:118 [ASN] a:715 [A] ✔
AK:28 [ASN] AA:691 [G] k:27 [ASN] a:688 [G] ✔
AK:28 [ASN] AA:692 [U] k:27 [ASN] a:689 [U] ✔
AK:40 [ASN] AA:683 [G] k:39 [ASN] a:680 [G] ✔
AK:40 [ASN] AA:684 [U] k:39 [ASN] a:681 [U] ✔
AK:38 [GLN] AA:708 [C] k:37 [GLN] a:705 [C] ✔
AK:115 [PRO] AA:676 [A] k:114 [PRO] a:673 [A] ✔
AK:115 [PRO] AA:677 [U] k:114 [PRO] a:674 [U] ✔
AK:127 [ARG] AA:692 [U] k:126 [ARG] a:689 [U] ✔
AK:127 [ARG] AA:693 [G] k:126 [ARG] a:690 [G] ✔
AK:127 [ARG] AA:796 [C] k:126 [ARG] a:793 [C] ✔
AK:127 [ARG] AA:797 [C] k:126 [ARG] a:794 [C] ✔
AK:39 [GLY] AA:683 [G] k:38 [GLY] a:680 [G] ✔
AK:39 [GLY] AA:707 [U] k:38 [GLY] a:704 [U] ✔
AK:39 [GLY] AA:708 [C] k:38 [GLY] a:705 [C] ✔
AK:55 [SER] AA:694 [A] k:54 [SER] a:691 [A] ✔
AK:55 [SER] AA:695 [A] k:54 [SER] a:692 [A] ✔
AK:46 [THR] AA:688 [G] k:45 [THR] a:685 [G] ✔
AK:46 [THR] AA:689 [C] k:45 [THR] a:686 [C] ✔
AK:22 [HIS] AA:707 [U] k:21 [HIS] a:704 [U] ✔
AK:41 [ALA] AA:683 [G] k:40 [ALA] a:680 [G] ✔
AK:41 [ALA] AA:684 [U] k:40 [ALA] a:681 [U] ✔
AK:41 [ALA] AA:685 [G] k:40 [ALA] a:682 [G] ✔
AK:41 [ALA] AA:706 [A] k:40 [ALA] a:703 [A] ✔
AK:44 [TRP] AA:685 [G] k:43 [TRP] a:682 [G] ✔
AK:44 [TRP] AA:686 [U] k:43 [TRP] a:683 [U] ✔
AK:44 [TRP] AA:687 [A] k:43 [TRP] a:684 [A] ✔
AK:44 [TRP] AA:688 [G] k:43 [TRP] a:685 [G] ✔
AK:44 [TRP] AA:704 [A] k:43 [TRP] a:701 [A] ✔
AK:44 [TRP] AA:705 [G] k:43 [TRP] a:702 [G] ✔
AK:123 [PRO] AA:778 [G] k:122 [PRO] a:775 [G] ✔
AK:123 [PRO] AA:779 [C] k:122 [PRO] a:776 [C] ✔
AK:122 [ARG] AA:778 [G] k:121 [ARG] a:775 [G] ✔
AK:122 [ARG] AA:779 [C] k:121 [ARG] a:776 [C] ✔
AK:122 [ARG] AA:1524 [C] k:121 [ARG] a:1521 [C] ✔
AK:122 [ARG] AA:1525 [G] k:121 [ARG] a:1522 [G] ✔
AK:33 [THR] AA:706 [A] k:32 [THR] a:703 [A] ✔
AK:33 [THR] AA:707 [U] k:32 [THR] a:704 [U] ✔
AK:120 [GLY] AA:675 [A] k:119 [GLY] a:672 [A] ✔
AK:120 [GLY] AA:676 [A] k:119 [GLY] a:673 [A] ✔
AK:120 [GLY] AA:715 [A] k:119 [GLY] a:712 [A] ✔
AK:120 [GLY] AA:716 [A] k:119 [GLY] a:713 [A] ✔
AK:118 [HIS] AA:674 [G] k:117 [HIS] a:671 [G] ✔
AK:118 [HIS] AA:675 [A] k:117 [HIS] a:672 [A] ✔
AK:118 [HIS] AA:716 [A] k:117 [HIS] a:713 [A] ✔
AK:118 [HIS] AA:717 [U] k:117 [HIS] a:714 [U] ✔
AK:118 [HIS] AA:718 [A] k:117 [HIS] a:715 [A] ✔
AK:31 [ILE] AA:689 [C] k:30 [ILE] a:686 [C] ✔
AK:31 [ILE] AA:690 [G] k:30 [ILE] a:687 [G] ✔
AK:31 [ILE] AA:705 [G] k:30 [ILE] a:702 [G] ✔
AK:116 [ILE] AA:675 [A] k:115 [ILE] a:672 [A] ✔
AK:116 [ILE] AA:676 [A] k:115 [ILE] a:673 [A] ✔
AK:116 [ILE] AA:718 [A] k:115 [ILE] a:715 [A] ✔
AK:42 [LEU] AA:684 [U] k:41 [LEU] a:681 [U] ✔
AK:42 [LEU] AA:685 [G] k:41 [LEU] a:682 [G] ✔
AK:129 [VAL] AA:693 [G] k:128 [VAL] a:690 [G] ✔
AK:129 [VAL] AA:795 [C] k:128 [VAL] a:792 [C] ✔
AK:129 [VAL] AA:796 [C] k:128 [VAL] a:793 [C] ✔
AK:129 [VAL] AA:1506 [U] k:128 [VAL] a:1503 [U] ✔
AK:24 [HIS] AA:690 [G] k:23 [HIS] a:687 [G] ❌ 7RYG_k_a
AK:26 [SER] AA:691 [G] k:25 [SER] a:688 [G] ❌ 7RYG_k_a
AK:125 [LYS] AA:1524 [C] k:124 [LYS] a:1521 [C] ❌ 7RYG_k_a
AK:54 [GLY] AA:694 [A] k:53 [GLY] a:691 [A] ❌ 7RYG_k_a
AK:57 [LYS] AA:692 [U] k:56 [LYS] a:689 [U] ❌ 7RYG_k_a
AK:53 [ARG] AA:689 [C] k:52 [ARG] a:686 [C] ❌ 7RYG_k_a
AK:53 [ARG] AA:690 [G] k:52 [ARG] a:687 [G] ❌ 7RYG_k_a
AK:53 [ARG] AA:691 [G] k:52 [ARG] a:688 [G] ❌ 7RYG_k_a
AK:87 [LYS] AA:708 [C] k:86 [LYS] a:705 [C] ❌ 7RYG_k_a
AK:49 [GLY] AA:689 [C] k:48 [GLY] a:686 [C] ❌ 7RYG_k_a
AK:40 [ASN] AA:707 [U] k:39 [ASN] a:704 [U] ❌ 7RYG_k_a
AK:39 [GLY] AA:684 [U] k:38 [GLY] a:681 [U] ❌ 7RYG_k_a
AK:46 [THR] AA:705 [G] k:45 [THR] a:702 [G] ❌ 7RYG_k_a
AK:22 [HIS] AA:706 [A] k:21 [HIS] a:703 [A] ❌ 7RYG_k_a
AK:22 [HIS] AA:708 [C] k:21 [HIS] a:705 [C] ❌ 7RYG_k_a
AK:41 [ALA] AA:707 [U] k:40 [ALA] a:704 [U] ❌ 7RYG_k_a
AK:31 [ILE] AA:706 [A] k:30 [ILE] a:703 [A] ❌ 7RYG_k_a
AK:121 [CYS] AA:715 [A] k:120 [CYS] a:712 [A] ❌ 4YBB_AK_AA
AK:125 [LYS] AA:1522 [U] k:124 [LYS] a:1519 [U] ❌ 4YBB_AK_AA
AK:28 [ASN] AA:690 [G] k:27 [ASN] a:687 [G] ❌ 4YBB_AK_AA
AK:55 [SER] AA:692 [U] k:54 [SER] a:689 [U] ❌ 4YBB_AK_AA
AK:55 [SER] AA:693 [G] k:54 [SER] a:690 [G] ❌ 4YBB_AK_AA
AK:129 [VAL] AA:1507 [A] k:128 [VAL] a:1504 [A] ❌ 7RYG_a:1504 no longer at interface
AK:125 [LYS] AA:781 [A] k:124 [LYS] a:778 [A] ❌ 4YBB_AA:781 no longer at interface
AK:43 [GLY] AA:685 [G] k:42 [ALA] a:682 [G] ❌ 7RYG_k:42 no longer at interface
AK:13 [ARG] AA:685 [G] k:12 [THR] a:682 [G] ❌ 7RYG_k:12 no longer at interface
AK:13 [ARG] AA:686 [U] k:12 [THR] a:683 [U] ❌ 7RYG_k:12 no longer at interface
AK:77 [TYR] AA:685 [G] k:76 [TYR] a:682 [G] ❌ 7RYG_k:76 no longer at interface
AK:35 [THR] AA:707 [U] k:34 [THR] a:704 [U] ❌ 7RYG_k:34 no longer at interface
AK:85 [MET] AA:708 [C] k:84 [LEU] a:705 [C] ❌ 7RYG_k:84 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like Bacterial small subunit ribosomal RNA 0.97 1.43 0.97 0.95 0.97 1.0 0.97 0.92 0.85 0.55 0.27


Other pairs involving 4YBB_AK_AA or 7RYG_k_a

Total number of entries: 8

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4YBB_AK_AA 7K00_K_A 0.74 0.98 2.98 0.79 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
4YBB_AK_AA 7O7Y_An_A2 0.59 0.9 4.01 0.21 Ribonuclease H-like compare
4YBB_AK_AA 7RYG_k_a 0.92 0.97 1.43 0.97 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
4YBB_AK_AA 6S0X_k_a 0.38 0.96 4.28 0.32 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
4Y4O_1k_1a 4YBB_AK_AA 0.62 0.96 3.51 0.4 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
4Y4O_1k_1a 7RYG_k_a 0.83 0.92 2.81 0.62 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
7K00_K_A 7RYG_k_a 0.93 0.93 2.33 0.95 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare
6S0X_k_a 7RYG_k_a 0.54 0.96 4.13 0.41 Ribonuclease H-like Bacterial small subunit ribosomal RNA compare