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All interfaces > All interologs > Interface groups > group105 > 1JJ2_1_0 vs 6AZ3_l_1,2

Interface analysis


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Common contacts -

1JJ2_1
1JJ2_0
6AZ3_l
6AZ3_1,2
Conserved?
1:47 [THR] 0:1417 [G] l:49 [LEU] 1:1600 [A] ✔
1:40 [ARG] 0:1417 [G] l:42 [ARG] 1:1600 [A] ✔
1:40 [ARG] 0:1418 [U] l:42 [ARG] 1:1601 [U] ✔
1:3 [LYS] 0:1417 [G] l:5 [LYS] 1:1600 [A] ✔
1:3 [LYS] 0:1675 [C] l:5 [LYS] 2:1797 [C] ✔
1:3 [LYS] 0:1676 [G] l:5 [LYS] 2:1798 [G] ✔
1:3 [LYS] 0:1677 [U] l:5 [LYS] 2:1799 [U] ✔
1:8 [LYS] 0:1676 [G] l:10 [LYS] 2:1798 [G] ✔
1:8 [LYS] 0:1677 [U] l:10 [LYS] 2:1799 [U] ✔
1:2 [LYS] 0:1413 [A] l:4 [PHE] 1:1596 [A] ✔
1:2 [LYS] 0:1414 [A] l:4 [PHE] 1:1597 [A] ✔
1:2 [LYS] 0:1486 [A] l:4 [PHE] 1:1740 [C] ✔
1:2 [LYS] 0:1676 [G] l:4 [PHE] 2:1798 [G] ✔
1:46 [ASP] 0:1416 [G] l:48 [LYS] 1:1599 [G] ✔
1:46 [ASP] 0:1417 [G] l:48 [LYS] 1:1600 [A] ✔
1:46 [ASP] 0:1687 [C] l:48 [LYS] 2:1809 [C] ✔
1:37 [HIS] 0:462 [A] l:39 [GLU] 1:391 [A] ✔
1:37 [HIS] 0:466 [A] l:39 [GLU] 1:395 [A] ✔
1:41 [HIS] 0:1439 [C] l:43 [HIS] 1:1622 [A] ✔
1:41 [HIS] 0:1440 [U] l:43 [HIS] 1:1623 [C] ✔
1:35 [ARG] 0:462 [A] l:37 [TRP] 1:391 [A] ✔
1:15 [ASP] 0:1418 [U] l:17 [MET] 1:1601 [U] ✔
1:1 [GLY] 0:1414 [A] l:2 [GLY] 1:1597 [A] ✔
1:1 [GLY] 0:1415 [G] l:2 [GLY] 1:1598 [G] ✔
1:1 [GLY] 0:1417 [G] l:2 [GLY] 1:1600 [A] ✔
1:11 [LEU] 0:1417 [G] l:13 [TYR] 1:1600 [A] ✔
1:38 [LYS] 0:465 [U] l:40 [LYS] 1:394 [U] ✔
1:38 [LYS] 0:466 [A] l:40 [LYS] 1:395 [A] ✔
1:39 [ARG] 0:1441 [G] l:41 [ARG] 1:1624 [A] ✔
1:45 [ASN] 0:467 [G] l:47 [THR] 1:396 [G] ✔
1:45 [ASN] 0:1417 [G] l:47 [THR] 1:1600 [A] ✔
1:5 [LYS] 0:1675 [C] l:7 [LEU] 2:1797 [C] ✔
1:5 [LYS] 0:1676 [G] l:7 [LEU] 2:1798 [G] ✔
1:20 [ARG] 0:1441 [G] l:22 [PRO] 1:1624 [A] ✔
1:20 [ARG] 0:1442 [A] l:22 [PRO] 1:1625 [C] ✔
1:49 [GLU] 0:1416 [G] l:51 [TYR] 1:1599 [G] ✔
1:42 [TRP] 0:1416 [G] l:44 [TRP] 1:1599 [G] ✔
1:42 [TRP] 0:1417 [G] l:44 [TRP] 1:1600 [A] ✔
1:42 [TRP] 0:1418 [U] l:44 [TRP] 1:1601 [U] ✔
1:42 [TRP] 0:1419 [U] l:44 [TRP] 1:1602 [U] ✔
1:42 [TRP] 0:1438 [G] l:44 [TRP] 1:1621 [U] ✔
1:42 [TRP] 0:1439 [C] l:44 [TRP] 1:1622 [A] ✔
1:42 [TRP] 0:1685 [A] l:44 [TRP] 2:1807 [A] ✔
1:42 [TRP] 0:1686 [C] l:44 [TRP] 2:1808 [C] ✔
1:44 [ARG] 0:468 [U] l:46 [ARG] 1:397 [C] ✔
1:43 [ARG] 0:1438 [G] l:45 [ARG] 1:1621 [U] ✔
1:43 [ARG] 0:1684 [A] l:45 [ARG] 2:1806 [C] ✔
1:43 [ARG] 0:1685 [A] l:45 [ARG] 2:1807 [A] ✔
1:43 [ARG] 0:1686 [C] l:45 [ARG] 2:1808 [C] ✔
1:43 [ARG] 0:1691 [A] l:45 [ARG] 2:1813 [U] ✔
1:3 [LYS] 0:1418 [U] l:5 [LYS] 1:1601 [U] ❌ 6AZ3_l_1,2
1:3 [LYS] 0:1486 [A] l:5 [LYS] 1:1740 [C] ❌ 6AZ3_l_1,2
1:2 [LYS] 0:1415 [G] l:4 [PHE] 1:1598 [G] ❌ 6AZ3_l_1,2
1:41 [HIS] 0:1418 [U] l:43 [HIS] 1:1601 [U] ❌ 6AZ3_l_1,2
1:41 [HIS] 0:1438 [G] l:43 [HIS] 1:1621 [U] ❌ 6AZ3_l_1,2
1:11 [LEU] 0:1418 [U] l:13 [TYR] 1:1601 [U] ❌ 6AZ3_l_1,2
1:39 [ARG] 0:467 [G] l:41 [ARG] 1:396 [G] ❌ 6AZ3_l_1,2
1:45 [ASN] 0:1416 [G] l:47 [THR] 1:1599 [G] ❌ 6AZ3_l_1,2
1:20 [ARG] 0:1440 [U] l:22 [PRO] 1:1623 [C] ❌ 6AZ3_l_1,2
1:44 [ARG] 0:1691 [A] l:46 [ARG] 2:1813 [U] ❌ 6AZ3_l_1,2
1:8 [LYS] 0:1675 [C] l:10 [LYS] 2:1797 [C] ❌ 1JJ2_1_0
1:11 [LEU] 0:1416 [G] l:13 [TYR] 1:1599 [G] ❌ 1JJ2_1_0
1:15 [ASP] 0:1417 [G] l:17 [MET] 1:1600 [A] ❌ 1JJ2_1_0
1:1 [GLY] 0:1413 [A] l:2 [GLY] 1:1596 [A] ❌ 1JJ2_1_0
1:1 [GLY] 0:1416 [G] l:2 [GLY] 1:1599 [G] ❌ 1JJ2_1_0
1:31 [GLU] 0:462 [A] l:36 [LYS] 1:391 [A] ❌ 1JJ2_1_0
1:36 [ASN] 0:462 [A] l:38 [ASN] 1:391 [A] ❌ 1JJ2_1_0
1:2 [LYS] 0:1417 [G] l:4 [PHE] 1:1600 [A] ❌ 1JJ2_1_0
1:38 [LYS] 0:462 [A] l:40 [LYS] 1:391 [A] ❌ 1JJ2_1_0
1:39 [ARG] 0:1440 [U] l:41 [ARG] 1:1623 [C] ❌ 1JJ2_1_0
1:45 [ASN] 0:468 [U] l:47 [THR] 1:397 [C] ❌ 1JJ2_1_0
1:46 [ASP] 0:1686 [C] l:48 [LYS] 2:1808 [C] ❌ 1JJ2_1_0
1:47 [THR] 0:1416 [G] l:49 [LEU] 1:1599 [G] ❌ 1JJ2_1_0
1:49 [GLU] 0:1417 [G] l:51 [TYR] 1:1600 [A] ❌ 1JJ2_1_0
1:3 [LYS] 0:1678 [A] l:5 [LYS] 2:1800 [A] ❌ 6AZ3_2:18 no longer at interface
1:8 [LYS] 0:1446 [U] l:10 [LYS] 1:1629 [U] ❌ 6AZ3_1:1629 no longer at interface
1:35 [ARG] 0:514 [G] l:37 [TRP] 1:443 [A] ❌ 6AZ3_1:443 no longer at interface
1:1 [GLY] 0:1681 [G] l:2 [GLY] 2:1803 [C] ❌ 6AZ3_2:21 no longer at interface
1:31 [GLU] 0:513 [A] l:36 [LYS] 1:442 [A] ❌ 6AZ3_1:442 no longer at interface
1:5 [LYS] 0:1674 [C] l:7 [LEU] 2:1796 [C] ❌ 6AZ3_2:14 no longer at interface
1:44 [ARG] 0:1690 [C] l:46 [ARG] 2:1812 [A] ❌ 6AZ3_2:30 no longer at interface
1:43 [ARG] 0:1690 [C] l:45 [ARG] 2:1812 [A] ❌ 6AZ3_2:30 no longer at interface
1:15 [ASP] 0:1445 [G] l:17 [MET] 1:1628 [OMG] ❌ 1JJ2_0:1445 no longer at interface
1:1 [GLY] 0:1680 [C] l:2 [GLY] 2:1802 [U] ❌ 1JJ2_0:1680 no longer at interface
1:1 [GLY] 0:1679 [C] l:2 [GLY] 2:1801 [C] ❌ 1JJ2_0:1679 no longer at interface
1:37 [HIS] 0:463 [A] l:39 [GLU] 1:392 [A] ❌ 1JJ2_0:463 no longer at interface
1:37 [HIS] 0:477 [A] l:39 [GLU] 1:406 [A] ❌ 1JJ2_0:477 no longer at interface
1:19 [SER] 0:1442 [A] l:21 [LYS] 1:1625 [C] ❌ 6AZ3_l:21 no longer at interface
1:14 [LEU] 0:1418 [U] l:16 [LYS] 1:1601 [U] ❌ 6AZ3_l:16 no longer at interface
1:4 [SER] 0:1675 [C] l:6 [PRO] 2:1797 [C] ❌ 6AZ3_l:6 no longer at interface
1:4 [SER] 0:1676 [G] l:6 [PRO] 2:1798 [G] ❌ 6AZ3_l:6 no longer at interface
1:18 [ASN] 0:1418 [U] l:20 [ASN] 1:1601 [U] ❌ 1JJ2_1:18 no longer at interface
1:48 [ASP] 0:1687 [C] l:50 [ASN] 2:1809 [C] ❌ 1JJ2_1:48 no longer at interface
1:48 [ASP] 0:1415 [G] l:50 [ASN] 1:1598 [G] ❌ 1JJ2_1:48 no longer at interface
1:48 [ASP] 0:1417 [G] l:50 [ASN] 1:1600 [A] ❌ 1JJ2_1:48 no longer at interface
1:48 [ASP] 0:1416 [G] l:50 [ASN] 1:1599 [G] ❌ 1JJ2_1:48 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L39e 0.79 1.79 0.38 0.8 0.79 0.83 0.74 0.76 0.79 0.24 0.48


Other pairs involving 1JJ2_1_0 or 6AZ3_l_1,2

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_l_1,2 7O7Y_Bl_B5 0.84 0.92 1.02 0.52 Ribosomal protein L39e Eukaryotic large subunit ribosomal RNA compare
1YHQ_2_0 6AZ3_l_1,2 0.73 0.79 1.93 0.38 Ribosomal protein L39e compare
1JJ2_1_0 7O7Y_Bl_B5 0.80 0.94 2.12 0.34 Ribosomal protein L39e compare
1JJ2_1_0 1VQ8_2_0 0.98 1.0 0.52 0.96 Ribosomal protein L39e Archaeal large subunit ribosomal RNA compare
1JJ2_1_0 1YHQ_2_0 0.99 1.0 0.29 0.95 Ribosomal protein L39e Archaeal large subunit ribosomal RNA compare
1JJ2_1_0 6AZ3_l_1,2 0.76 0.79 1.79 0.38 Ribosomal protein L39e compare
1JJ2_1_0 7O7Y_Bl_B8 0.57 0.75 1.49 0.36 Ribosomal protein L39e compare
1JJ2_1_0 6AZ3_l_7 0.63 0.72 1.52 0.42 Ribosomal protein L39e compare
1VQ8_2_0 6AZ3_l_1,2 0.73 0.79 1.72 0.41 Ribosomal protein L39e compare