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All interfaces > All interologs > Interface groups > group105 > 1JJ2_1_0 vs 6AZ3_l_7

Interface analysis


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Common contacts -

1JJ2_1
1JJ2_0
6AZ3_l
6AZ3_7
Conserved?
1:6 [ALA] 0:121 [U] l:8 [ALA] 7:111 [C] ✔
1:6 [ALA] 0:122 [C] l:8 [ALA] 7:112 [G] ✔
1:7 [THR] 0:120 [A] l:9 [VAL] 7:110 [A] ✔
1:19 [SER] 0:60 [A] l:21 [LYS] 7:52 [A] ✔
1:10 [ARG] 0:52 [A] l:12 [LYS] 7:44 [A] ✔
1:10 [ARG] 0:53 [C] l:12 [LYS] 7:45 [C] ✔
1:25 [VAL] 0:60 [A] l:27 [ILE] 7:52 [A] ✔
1:17 [GLN] 0:60 [A] l:19 [GLN] 7:52 [A] ✔
1:17 [GLN] 0:61 [G] l:19 [GLN] 7:53 [A] ✔
1:22 [PRO] 0:59 [A] l:24 [PRO] 7:51 [A] ✔
1:22 [PRO] 0:60 [A] l:24 [PRO] 7:52 [A] ✔
1:9 [LYS] 0:53 [C] l:11 [LYS] 7:45 [C] ✔
1:9 [LYS] 0:54 [G] l:11 [LYS] 7:46 [G] ✔
1:9 [LYS] 0:122 [C] l:11 [LYS] 7:112 [G] ✔
1:24 [TRP] 0:58 [C] l:26 [TRP] 7:50 [U] ✔
1:24 [TRP] 0:59 [A] l:26 [TRP] 7:51 [A] ✔
1:4 [SER] 0:121 [U] l:6 [PRO] 7:111 [C] ✔
1:38 [LYS] 0:61 [G] l:40 [LYS] 7:53 [A] ✔
1:38 [LYS] 0:62 [C] l:40 [LYS] 7:54 [G] ✔
1:27 [LEU] 0:87 [C] l:29 [LEU] 7:75 [OMG] ✔
1:36 [ASN] 0:60 [A] l:38 [ASN] 7:52 [A] ✔
1:16 [ASN] 0:60 [A] l:18 [ASN] 7:52 [A] ✔
1:5 [LYS] 0:122 [C] l:7 [LEU] 7:112 [G] ✔
1:28 [LYS] 0:59 [A] l:30 [ARG] 7:51 [A] ✔
1:28 [LYS] 0:87 [C] l:30 [ARG] 7:75 [OMG] ✔
1:13 [LYS] 0:53 [C] l:15 [LYS] 7:45 [C] ✔
1:13 [LYS] 0:54 [G] l:15 [LYS] 7:46 [G] ✔
1:20 [ARG] 0:60 [A] l:22 [PRO] 7:52 [A] ✔
1:49 [GLU] 0:120 [A] l:51 [TYR] 7:110 [A] ✔
1:21 [VAL] 0:60 [A] l:23 [VAL] 7:52 [A] ✔
1:7 [THR] 0:121 [U] l:9 [VAL] 7:111 [C] ❌ 6AZ3_l_7
1:10 [ARG] 0:120 [A] l:12 [LYS] 7:110 [A] ❌ 6AZ3_l_7
1:10 [ARG] 0:121 [U] l:12 [LYS] 7:111 [C] ❌ 6AZ3_l_7
1:25 [VAL] 0:86 [A] l:27 [ILE] 7:74 [U] ❌ 6AZ3_l_7
1:24 [TRP] 0:60 [A] l:26 [TRP] 7:52 [A] ❌ 6AZ3_l_7
1:24 [TRP] 0:86 [A] l:26 [TRP] 7:74 [U] ❌ 6AZ3_l_7
1:28 [LYS] 0:58 [C] l:30 [ARG] 7:50 [U] ❌ 6AZ3_l_7
1:28 [LYS] 0:86 [A] l:30 [ARG] 7:74 [U] ❌ 6AZ3_l_7
1:14 [LEU] 0:53 [C] l:16 [LYS] 7:45 [C] ❌ 1JJ2_1_0
1:16 [ASN] 0:54 [G] l:18 [ASN] 7:46 [G] ❌ 1JJ2_1_0
1:24 [TRP] 0:87 [C] l:26 [TRP] 7:75 [OMG] ❌ 1JJ2_1_0
1:25 [VAL] 0:59 [A] l:27 [ILE] 7:51 [A] ❌ 1JJ2_1_0
1:25 [VAL] 0:61 [G] l:27 [ILE] 7:53 [A] ❌ 1JJ2_1_0
1:28 [LYS] 0:60 [A] l:30 [ARG] 7:52 [A] ❌ 1JJ2_1_0
1:28 [LYS] 0:61 [G] l:30 [ARG] 7:53 [A] ❌ 1JJ2_1_0
1:36 [ASN] 0:61 [G] l:38 [ASN] 7:53 [A] ❌ 1JJ2_1_0
1:2 [LYS] 0:120 [A] l:4 [PHE] 7:110 [A] ❌ 1JJ2_1_0
1:4 [SER] 0:122 [C] l:6 [PRO] 7:112 [G] ❌ 1JJ2_1_0
1:4 [SER] 0:120 [A] l:6 [PRO] 7:110 [A] ❌ 1JJ2_1_0
1:5 [LYS] 0:123 [U] l:7 [LEU] 7:113 [G] ❌ 6AZ3_7:113 no longer at interface
1:29 [THR] 0:86 [A] l:33 [ASN] 7:74 [U] ❌ 6AZ3_l:33 no longer at interface
1:29 [THR] 0:87 [C] l:33 [ASN] 7:75 [OMG] ❌ 6AZ3_l:33 no longer at interface
1:12 [ALA] 0:54 [G] l:14 [ALA] 7:46 [G] ❌ 1JJ2_1:12 no longer at interface
1:18 [ASN] 0:60 [A] l:20 [ASN] 7:52 [A] ❌ 1JJ2_1:18 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L39e 0.72 1.52 0.42 0.8 0.66 0.85 1.0 0.63 0.52 0.25 0.21


Other pairs involving 1JJ2_1_0 or 6AZ3_l_7

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_2_0 6AZ3_l_7 0.79 0.72 1.34 0.42 Ribosomal protein L39e compare
1JJ2_1_0 7O7Y_Bl_B5 0.80 0.94 2.12 0.34 Ribosomal protein L39e compare
1JJ2_1_0 1VQ8_2_0 0.98 1.0 0.52 0.96 Ribosomal protein L39e Archaeal large subunit ribosomal RNA compare
1JJ2_1_0 1YHQ_2_0 0.99 1.0 0.29 0.95 Ribosomal protein L39e Archaeal large subunit ribosomal RNA compare
1JJ2_1_0 6AZ3_l_1,2 0.76 0.79 1.79 0.38 Ribosomal protein L39e compare
1JJ2_1_0 7O7Y_Bl_B8 0.57 0.75 1.49 0.36 Ribosomal protein L39e compare
1JJ2_1_0 6AZ3_l_7 0.63 0.72 1.52 0.42 Ribosomal protein L39e compare
6AZ3_l_7 7O7Y_Bl_B8 0.89 0.92 0.46 0.46 Ribosomal protein L39e 5.8S ribosomal RNA compare
1VQ8_2_0 6AZ3_l_7 0.73 0.72 1.25 0.46 Ribosomal protein L39e compare