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All interfaces > All interologs > Interface groups > group105 > 1VQ8_2_0 vs 7O7Y_Bl_B5

Interface analysis


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Common contacts -

1VQ8_2
1VQ8_0
7O7Y_Bl
7O7Y_B5
Conserved?
2:47 [THR] 0:1417 [G] Bl:49 [LEU] B5:2250 [G] ✔
2:40 [ARG] 0:1417 [G] Bl:42 [ARG] B5:2250 [G] ✔
2:40 [ARG] 0:1418 [U] Bl:42 [ARG] B5:2251 [U] ✔
2:3 [LYS] 0:1417 [G] Bl:5 [LYS] B5:2250 [G] ✔
2:3 [LYS] 0:1418 [U] Bl:5 [LYS] B5:2251 [U] ✔
2:3 [LYS] 0:1486 [A] Bl:5 [LYS] B5:2355 [A] ✔
2:3 [LYS] 0:1675 [C] Bl:5 [LYS] B5:2623 [C] ✔
2:3 [LYS] 0:1676 [G] Bl:5 [LYS] B5:2624 [G] ✔
2:3 [LYS] 0:1677 [U] Bl:5 [LYS] B5:2625 [U] ✔
2:14 [LEU] 0:1418 [U] Bl:16 [LYS] B5:2251 [U] ✔
2:8 [LYS] 0:1676 [G] Bl:10 [LYS] B5:2624 [G] ✔
2:8 [LYS] 0:1677 [U] Bl:10 [LYS] B5:2625 [U] ✔
2:2 [LYS] 0:1413 [A] Bl:4 [HIS] B5:2246 [A] ✔
2:2 [LYS] 0:1414 [A] Bl:4 [HIS] B5:2247 [A] ✔
2:2 [LYS] 0:1452 [G] Bl:4 [HIS] B5:2285 [G] ✔
2:2 [LYS] 0:1486 [A] Bl:4 [HIS] B5:2355 [A] ✔
2:2 [LYS] 0:1676 [G] Bl:4 [HIS] B5:2624 [G] ✔
2:46 [ASP] 0:1416 [G] Bl:48 [LYS] B5:2249 [G] ✔
2:46 [ASP] 0:1417 [G] Bl:48 [LYS] B5:2250 [G] ✔
2:46 [ASP] 0:1687 [C] Bl:48 [LYS] B5:2635 [C] ✔
2:37 [HIS] 0:462 [A] Bl:39 [SER] B5:362 [A] ✔
2:37 [HIS] 0:466 [A] Bl:39 [SER] B5:366 [A] ✔
2:41 [HIS] 0:1418 [U] Bl:43 [HIS] B5:2251 [U] ✔
2:41 [HIS] 0:1438 [G] Bl:43 [HIS] B5:2271 [A] ✔
2:41 [HIS] 0:1439 [C] Bl:43 [HIS] B5:2272 [A] ✔
2:41 [HIS] 0:1440 [U] Bl:43 [HIS] B5:2273 [C] ✔
2:4 [SER] 0:1675 [C] Bl:6 [THR] B5:2623 [C] ✔
2:4 [SER] 0:1676 [G] Bl:6 [THR] B5:2624 [G] ✔
2:35 [ARG] 0:462 [A] Bl:37 [TYR] B5:362 [A] ✔
2:35 [ARG] 0:514 [G] Bl:37 [TYR] B5:413 [G] ✔
2:15 [ASP] 0:1418 [U] Bl:17 [GLN] B5:2251 [U] ✔
2:1 [GLY] 0:1414 [A] Bl:2 [SER] B5:2247 [A] ✔
2:1 [GLY] 0:1415 [G] Bl:2 [SER] B5:2248 [G] ✔
2:1 [GLY] 0:1416 [G] Bl:2 [SER] B5:2249 [G] ✔
2:1 [GLY] 0:1417 [G] Bl:2 [SER] B5:2250 [G] ✔
2:11 [LEU] 0:1417 [G] Bl:13 [LEU] B5:2250 [G] ✔
2:38 [LYS] 0:465 [U] Bl:40 [LYS] B5:365 [U] ✔
2:38 [LYS] 0:466 [A] Bl:40 [LYS] B5:366 [A] ✔
2:45 [ASN] 0:467 [G] Bl:47 [THR] B5:367 [C] ✔
2:45 [ASN] 0:1417 [G] Bl:47 [THR] B5:2250 [G] ✔
2:5 [LYS] 0:1675 [C] Bl:7 [PHE] B5:2623 [C] ✔
2:5 [LYS] 0:1676 [G] Bl:7 [PHE] B5:2624 [G] ✔
2:20 [ARG] 0:1441 [G] Bl:22 [PRO] B5:2274 [A] ✔
2:20 [ARG] 0:1442 [A] Bl:22 [PRO] B5:2275 [U] ✔
2:49 [GLU] 0:1416 [G] Bl:51 [LEU] B5:2249 [G] ✔
2:42 [TRP] 0:1416 [G] Bl:44 [TRP] B5:2249 [G] ✔
2:42 [TRP] 0:1417 [G] Bl:44 [TRP] B5:2250 [G] ✔
2:42 [TRP] 0:1418 [U] Bl:44 [TRP] B5:2251 [U] ✔
2:42 [TRP] 0:1419 [U] Bl:44 [TRP] B5:2252 [U] ✔
2:42 [TRP] 0:1438 [G] Bl:44 [TRP] B5:2271 [A] ✔
2:42 [TRP] 0:1439 [C] Bl:44 [TRP] B5:2272 [A] ✔
2:42 [TRP] 0:1685 [A] Bl:44 [TRP] B5:2633 [U] ✔
2:42 [TRP] 0:1686 [C] Bl:44 [TRP] B5:2634 [C] ✔
2:44 [ARG] 0:1690 [C] Bl:46 [ARG] B5:2638 [A] ✔
2:43 [ARG] 0:1438 [G] Bl:45 [ARG] B5:2271 [A] ✔
2:43 [ARG] 0:1684 [A] Bl:45 [ARG] B5:2632 [A] ✔
2:43 [ARG] 0:1685 [A] Bl:45 [ARG] B5:2633 [U] ✔
2:43 [ARG] 0:1686 [C] Bl:45 [ARG] B5:2634 [C] ✔
2:43 [ARG] 0:1691 [A] Bl:45 [ARG] B5:2639 [G] ✔
2:2 [LYS] 0:1415 [G] Bl:4 [HIS] B5:2248 [G] ❌ 7O7Y_Bl_B5
2:37 [HIS] 0:465 [U] Bl:39 [SER] B5:365 [U] ❌ 7O7Y_Bl_B5
2:11 [LEU] 0:1418 [U] Bl:13 [LEU] B5:2251 [U] ❌ 7O7Y_Bl_B5
2:30 [ASP] 0:513 [A] Bl:34 [LYS] B5:412 [G] ❌ 7O7Y_Bl_B5
2:39 [ARG] 0:467 [G] Bl:41 [ARG] B5:367 [C] ❌ 7O7Y_Bl_B5
2:45 [ASN] 0:1416 [G] Bl:47 [THR] B5:2249 [G] ❌ 7O7Y_Bl_B5
2:44 [ARG] 0:1691 [A] Bl:46 [ARG] B5:2639 [G] ❌ 7O7Y_Bl_B5
2:31 [ARG] 0:513 [A] Bl:36 [ARG] B5:412 [G] ❌ 7O7Y_Bl_B5
2:19 [SER] 0:1442 [A] Bl:21 [ARG] B5:2275 [U] ❌ 1VQ8_2_0
2:30 [ASP] 0:462 [A] Bl:34 [LYS] B5:362 [A] ❌ 1VQ8_2_0
2:31 [ARG] 0:514 [G] Bl:36 [ARG] B5:413 [G] ❌ 1VQ8_2_0
2:31 [ARG] 0:462 [A] Bl:36 [ARG] B5:362 [A] ❌ 1VQ8_2_0
2:36 [ASN] 0:462 [A] Bl:38 [ASN] B5:362 [A] ❌ 1VQ8_2_0
2:2 [LYS] 0:1417 [G] Bl:4 [HIS] B5:2250 [G] ❌ 1VQ8_2_0
2:38 [LYS] 0:462 [A] Bl:40 [LYS] B5:362 [A] ❌ 1VQ8_2_0
2:39 [ARG] 0:1441 [G] Bl:41 [ARG] B5:2274 [A] ❌ 1VQ8_2_0
2:39 [ARG] 0:1440 [U] Bl:41 [ARG] B5:2273 [C] ❌ 1VQ8_2_0
2:43 [ARG] 0:1690 [C] Bl:45 [ARG] B5:2638 [A] ❌ 1VQ8_2_0
2:44 [ARG] 0:1439 [C] Bl:46 [ARG] B5:2272 [A] ❌ 1VQ8_2_0
2:44 [ARG] 0:1440 [U] Bl:46 [ARG] B5:2273 [C] ❌ 1VQ8_2_0
2:46 [ASP] 0:1686 [C] Bl:48 [LYS] B5:2634 [C] ❌ 1VQ8_2_0
2:3 [LYS] 0:1416 [G] Bl:5 [LYS] B5:2249 [G] ❌ 1VQ8_2_0
2:49 [GLU] 0:1417 [G] Bl:51 [LEU] B5:2250 [G] ❌ 1VQ8_2_0
2:4 [SER] 0:1486 [A] Bl:6 [THR] B5:2355 [A] ❌ 1VQ8_2_0
2:7 [THR] 0:1417 [G] Bl:9 [ILE] B5:2250 [G] ❌ 1VQ8_2_0
2:5 [LYS] 0:1674 [C] Bl:7 [PHE] B5:2622 [C] ❌ 7O7Y_B5:2622 no longer at interface
2:15 [ASP] 0:1445 [G] Bl:17 [GLN] B5:2278 [G] ❌ 1VQ8_0:1445 no longer at interface
2:1 [GLY] 0:1679 [C] Bl:2 [SER] B5:2627 [C] ❌ 1VQ8_0:1679 no longer at interface
2:30 [ASP] 0:461 [C] Bl:34 [LYS] B5:361 [C] ❌ 1VQ8_0:461 no longer at interface
2:44 [ARG] 0:468 [U] Bl:46 [ARG] B5:368 [C] ❌ 1VQ8_0:468 no longer at interface
2:45 [ASN] 0:468 [U] Bl:47 [THR] B5:368 [C] ❌ 1VQ8_0:468 no longer at interface
2:46 [ASP] 0:468 [U] Bl:48 [LYS] B5:368 [C] ❌ 1VQ8_0:468 no longer at interface
2:3 [LYS] 0:1678 [A] Bl:5 [LYS] B5:2626 [A] ❌ 1VQ8_0:1678 no longer at interface
2:18 [ASN] 0:1418 [U] Bl:20 [ASN] B5:2251 [U] ❌ 7O7Y_Bl:20 no longer at interface
2:26 [MET] 0:513 [A] Bl:28 [TRP] B5:412 [G] ❌ 1VQ8_2:26 no longer at interface
2:48 [ASP] 0:1416 [G] Bl:50 [GLY] B5:2249 [G] ❌ 1VQ8_2:48 no longer at interface
2:48 [ASP] 0:1417 [G] Bl:50 [GLY] B5:2250 [G] ❌ 1VQ8_2:48 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L39e 0.94 2.08 0.38 0.84 0.94 0.88 0.83 0.76 0.74 0.26 0.32


Other pairs involving 1VQ8_2_0 or 7O7Y_Bl_B5

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_l_1,2 7O7Y_Bl_B5 0.84 0.92 1.02 0.52 Ribosomal protein L39e Eukaryotic large subunit ribosomal RNA compare
1YHQ_2_0 7O7Y_Bl_B5 0.76 0.94 2.21 0.38 Ribosomal protein L39e compare
1JJ2_1_0 7O7Y_Bl_B5 0.80 0.94 2.12 0.34 Ribosomal protein L39e compare
1JJ2_1_0 1VQ8_2_0 0.98 1.0 0.52 0.96 Ribosomal protein L39e Archaeal large subunit ribosomal RNA compare
1VQ8_2_0 6AZ3_l_7 0.73 0.72 1.25 0.46 Ribosomal protein L39e compare
1VQ8_2_0 1YHQ_2_0 0.99 1.0 0.33 0.98 Ribosomal protein L39e Archaeal large subunit ribosomal RNA compare
1VQ8_2_0 6AZ3_l_1,2 0.73 0.79 1.72 0.41 Ribosomal protein L39e compare
1VQ8_2_0 7O7Y_Bl_B8 0.69 0.75 1.23 0.36 Ribosomal protein L39e compare
1VQ8_2_0 7O7Y_Bl_B5 0.76 0.94 2.08 0.38 Ribosomal protein L39e compare