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All interfaces > All interologs > Interface groups > group106 > 1JJ2_L_0

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Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

1JJ2_L
1JJ2_0
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
L:1 [ALA] 0:243 [A] 3.13 45.97
L:1 [ALA] 0:244 [C] 2.7 0:267 [G] 45.97
L:1 [ALA] 0:376 [C] 2.86 0:274 [G] sugar:BB 45.97
L:1 [ALA] 0:377 [C] 3.88 0:273 [G] 45.97
L:2 [ARG] 0:376 [C] 4.4 0:274 [G] 80.61
L:2 [ARG] 0:377 [C] 3.76 0:273 [G] 80.61
L:3 [SER] 0:242 [A] 3.36 0:269 [G] 58.48
L:3 [SER] 0:243 [A] 3.11 58.48
L:5 [TYR] 0:242 [A] 3.61 0:269 [G] 61.16
L:5 [TYR] 0:243 [A] 4.84 61.16
L:5 [TYR] 0:264 [G] 2.56 0:247 [A] 61.16
L:6 [SER] 0:378 [A] 4.78 0:271 [C] 55.44
L:9 [ARG] 0:377 [C] 4.87 0:273 [G] 45.2
L:9 [ARG] 0:378 [A] 2.44 0:271 [C] 45.2
L:9 [ARG] 0:379 [G] 3.79 0:240 [C] 45.2
L:9 [ARG] 0:380 [A] 2.97 0:408 [A] 45.2
L:12 [TRP] 0:380 [A] 3.81 0:408 [A] 34.67
L:13 [LYS] 0:380 [A] 3.63 0:408 [A] 54.28
L:13 [LYS] 0:381 [G] 3.61 54.28
L:13 [LYS] 0:409 [U] 2.58 base:SC 54.28
L:14 [ARG] 0:381 [G] 4.29 32.04
L:14 [ARG] 0:407 [A] 3.58 0:382 [U] 32.04
L:14 [ARG] 0:408 [A] 4.13 0:380 [A] 32.04
L:15 [PRO] 0:381 [G] 3.35 44.94
L:16 [LYS] 0:381 [G] 4.74 29.81
L:16 [LYS] 0:405 [C] 3.61 0:384 [G] 29.81
L:16 [LYS] 0:2131 [G] 3.64 0:2262 [C] 29.81
L:16 [LYS] 0:2132 [C] 3.03 0:2261 [C] 29.81
L:25 [TRP] 0:2133 [U] 3.87 0:2260 [A] 66.86
L:25 [TRP] 0:2243 [C] 3.74 66.86
L:25 [TRP] 0:2244 [A] 3.29 0:2257 [G] sugar:SC 66.86
L:28 [MET] 0:2245 [C] 4.9 0:2256 [G] 52.53
L:29 [GLN] 0:2244 [A] 3.45 0:2257 [G] 52.48
L:29 [GLN] 0:2245 [C] 3.72 0:2256 [G] 52.48
L:32 [ARG] 0:2132 [C] 4.66 0:2261 [C] 96.27
L:32 [ARG] 0:2133 [U] 4.87 0:2260 [A] 96.27
L:32 [ARG] 0:2244 [A] 3.08 0:2257 [G] 96.27
L:32 [ARG] 0:2245 [C] 2.89 0:2256 [G] 96.27
L:35 [PRO] 0:1466 [C] 4.48 0:1477 [C] 48.1
L:35 [PRO] 0:1467 [C] 2.82 0:1475 [G] 48.1
L:36 [ALA] 0:1467 [C] 2.72 0:1475 [G] 56.32
L:36 [ALA] 0:1468 [G] 3.62 0:1474 [C] 56.32
L:37 [VAL] 0:1467 [C] 4.52 0:1475 [G] 67.66
L:39 [ARG] 0:134 [U] 4.8 0:144 [A] 79.24
L:39 [ARG] 0:135 [G] 2.54 0:143 [C] 79.24
L:39 [ARG] 0:136 [C] 2.75 0:142 [G] 79.24
L:42 [ARG] 0:261 [A] 2.93 55.8
L:42 [ARG] 0:262 [A] 2.94 55.8
L:42 [ARG] 0:263 [U] 2.86 sugar:SC 55.8
L:45 [ARG] 0:380 [A] 4.03 0:408 [A] 86.37
L:45 [ARG] 0:381 [G] 2.64 86.37
L:46 [LEU] 0:263 [U] 3.39 58.77
L:46 [LEU] 0:264 [G] 3.18 0:247 [A] 58.77
L:47 [ASP] 0:241 [A] 4.63 0:270 [U] 68.41
L:47 [ASP] 0:380 [A] 5.0 0:408 [A] 68.41
L:48 [ARG] 0:379 [G] 3.8 0:240 [C] 85.82
L:48 [ARG] 0:380 [A] 3.07 0:408 [A] 85.82
L:48 [ARG] 0:381 [G] 3.07 85.82
L:48 [ARG] 0:430 [A] 3.95 sugar:SC 85.82
L:48 [ARG] 0:431 [G] 2.49 0:239 [C] 85.82
L:50 [ARG] 0:241 [A] 3.4 0:270 [U] 93.76
L:50 [ARG] 0:242 [A] 2.98 0:269 [G] 93.76
L:50 [ARG] 0:264 [G] 2.98 0:247 [A] 93.76
L:50 [ARG] 0:265 [U] 2.7 0:248 [A] 93.76
L:51 [SER] 0:240 [C] 4.64 0:379 [G] 61.48
L:51 [SER] 0:241 [A] 3.48 0:270 [U] 61.48
L:51 [SER] 0:379 [G] 2.76 0:240 [C] base:BB, base:SC 61.48
L:51 [SER] 0:431 [G] 3.43 0:239 [C] 61.48
L:52 [LEU] 0:379 [G] 4.99 0:240 [C] 79.76
L:52 [LEU] 0:431 [G] 2.98 0:239 [C] sugar:BB 79.76
L:52 [LEU] 0:432 [G] 4.94 0:238 [C] 79.76
L:53 [GLY] 0:431 [G] 4.61 0:239 [C] 98.7
L:54 [TYR] 0:264 [G] 4.03 0:247 [A] 89.23
L:55 [LYS] 0:241 [A] 4.8 0:270 [U] 88.4
L:55 [LYS] 0:265 [U] 3.73 0:248 [A] 88.4
L:55 [LYS] 0:266 [G] 3.18 0:245 [C] 88.4
L:56 [ALA] 0:260 [C] 4.44 0:249 [G] 94.12
L:56 [ALA] 0:261 [A] 3.52 94.12
L:56 [ALA] 0:262 [A] 4.56 94.12
L:56 [ALA] 0:264 [G] 3.77 0:247 [A] 94.12
L:56 [ALA] 0:265 [U] 2.86 0:248 [A] 94.12
L:57 [LYS] 0:250 [C] 4.05 0:259 [G] 93.36
L:57 [LYS] 0:260 [C] 4.22 0:249 [G] 93.36
L:57 [LYS] 0:261 [A] 4.88 93.36
L:57 [LYS] 0:265 [U] 4.09 0:248 [A] 93.36
L:57 [LYS] 0:266 [G] 3.24 0:245 [C] 93.36
L:58 [GLN] 0:136 [C] 3.18 0:142 [G] 69.77
L:58 [GLN] 0:137 [U] 2.95 0:140 [G] 69.77
L:58 [GLN] 0:250 [C] 4.26 0:259 [G] 69.77
L:58 [GLN] 0:251 [C] 3.51 0:258 [G] 69.77
L:58 [GLN] 0:259 [G] 2.73 0:250 [C] base:SC 69.77
L:58 [GLN] 0:260 [C] 3.69 0:249 [G] 69.77
L:59 [GLY] 0:135 [G] 4.01 0:143 [C] 94.72
L:59 [GLY] 0:136 [C] 4.07 0:142 [G] 94.72
L:61 [ILE] 0:135 [G] 3.54 0:143 [C] 61.47
L:61 [ILE] 0:136 [C] 4.52 0:142 [G] 61.47
L:66 [ALA] 0:1468 [G] 4.41 0:1474 [C] 87.0
L:68 [ARG] 0:1469 [C] 3.21 0:1472 [C] 56.01
L:68 [ARG] 0:1470 [A] 2.85 56.01
L:69 [LYS] 0:402 [U] 4.65 0:387 [G] 76.29
L:69 [LYS] 0:403 [C] 3.25 0:386 [G] 76.29
L:69 [LYS] 0:404 [G] 3.0 0:385 [C] 76.29
L:69 [LYS] 0:2131 [G] 4.37 0:2262 [C] 76.29
L:69 [LYS] 0:2263 [G] 3.67 0:2130 [C] 76.29
L:70 [GLY] 0:402 [U] 3.4 0:387 [G] 96.57
L:70 [GLY] 0:403 [C] 3.08 0:386 [G] 96.57
L:70 [GLY] 0:2263 [G] 3.29 0:2130 [C] 96.57
L:70 [GLY] 0:2264 [A] 3.86 0:2129 [U] 96.57
L:71 [SER] 0:402 [U] 3.86 0:387 [G] 62.24
L:71 [SER] 0:2263 [G] 3.95 0:2130 [C] 62.24
L:71 [SER] 0:2264 [A] 2.6 0:2129 [U] 62.24
L:72 [SER] 0:1470 [A] 3.84 70.93
L:73 [ARG] 0:1469 [C] 3.82 0:1472 [C] 48.52
L:73 [ARG] 0:1470 [A] 2.96 48.52
L:73 [ARG] 0:1864 [C] 3.34 48.52
L:73 [ARG] 0:1865 [A] 4.05 48.52
L:73 [ARG] 0:2263 [G] 3.41 0:2130 [C] 48.52
L:74 [ARG] 0:158 [A] 3.93 0:178 [U] 79.14
L:74 [ARG] 0:159 [G] 2.74 0:177 [A] 79.14
L:74 [ARG] 0:1864 [C] 3.38 79.14
L:75 [THR] 0:1864 [C] 3.22 44.49
L:76 [ARG] 0:1864 [C] 4.84 66.56
L:76 [ARG] 0:2121 [G] 3.98 0:2273 [C] 66.56
L:76 [ARG] 0:2122 [C] 2.98 0:2272 [G] base:SC, sugar:SC 66.56
L:76 [ARG] 0:2123 [A] 3.49 0:2270 [G] 66.56
L:76 [ARG] 0:2272 [G] 3.75 0:2122 [C] 66.56
L:76 [ARG] 0:2273 [C] 2.89 0:2121 [G] base:SC, sugar:SC 66.56
L:76 [ARG] 0:2274 [A] 4.29 0:2120 [U] 66.56
L:77 [PHE] 0:2121 [G] 4.87 0:2273 [C] 54.67
L:77 [PHE] 0:2122 [C] 4.02 0:2272 [G] 54.67
L:77 [PHE] 0:2273 [C] 4.2 0:2121 [G] 54.67
L:77 [PHE] 0:2274 [A] 2.99 0:2120 [U] 54.67
L:78 [ASN] 0:869 [G] 3.48 10.25
L:78 [ASN] 0:870 [G] 3.74 0:880 [C] 10.25
L:79 [LYS] 0:770 [C] 3.53 0:891 [G] 51.75
L:79 [LYS] 0:771 [G] 2.86 0:890 [C] 51.75
L:79 [LYS] 0:868 [G] 4.19 0:884 [C] 51.75
L:79 [LYS] 0:869 [G] 3.03 51.75
L:79 [LYS] 0:2274 [A] 4.16 0:2120 [U] 51.75
L:80 [GLY] 0:160 [A] 4.41 0:176 [U] 85.41
L:80 [GLY] 0:161 [A] 3.72 0:174 [A] 85.41
L:80 [GLY] 0:769 [C] 4.62 0:892 [G] 85.41
L:80 [GLY] 0:770 [C] 2.69 0:891 [G] 85.41
L:80 [GLY] 0:2274 [A] 3.34 0:2120 [U] 85.41
L:80 [GLY] 0:2275 [G] 3.53 0:2119 [C] 85.41
L:81 [ARG] 0:160 [A] 3.1 0:176 [U] 94.12
L:81 [ARG] 0:161 [A] 3.36 0:174 [A] 94.12
L:81 [ARG] 0:770 [C] 2.93 0:891 [G] 94.12
L:81 [ARG] 0:771 [G] 2.98 0:890 [C] 94.12
L:81 [ARG] 0:2274 [A] 2.75 0:2120 [U] sugar:BB, sugar:BB 94.12
L:81 [ARG] 0:2275 [G] 3.12 0:2119 [C] sugar:BB 94.12
L:82 [ARG] 0:161 [A] 2.92 0:174 [A] 87.81
L:82 [ARG] 0:170 [U] 3.03 0:221 [G] 87.81
L:82 [ARG] 0:171 [C] 2.73 0:164 [G] 87.81
L:82 [ARG] 0:172 [U] 3.26 0:163 [U] 87.81
L:82 [ARG] 0:173 [C] 3.93 0:162 [C] 87.81
L:82 [ARG] 0:2274 [A] 4.91 0:2120 [U] 87.81
L:82 [ARG] 0:2275 [G] 4.29 0:2119 [C] 87.81
L:83 [SER] 0:169 [A] 3.74 72.86
L:83 [SER] 0:170 [U] 2.57 0:221 [G] 72.86
L:83 [SER] 0:2121 [G] 3.57 0:2273 [C] 72.86
L:83 [SER] 0:2122 [C] 4.56 0:2272 [G] 72.86
L:84 [LYS] 0:170 [U] 3.03 0:221 [G] 67.42
L:84 [LYS] 0:171 [C] 3.19 0:164 [G] 67.42
L:84 [LYS] 0:390 [G] 3.29 0:399 [C] 67.42
L:84 [LYS] 0:391 [U] 2.7 0:398 [U] 67.42
L:85 [ARG] 0:160 [A] 3.46 0:176 [U] 69.27
L:85 [ARG] 0:161 [A] 4.01 0:174 [A] 69.27
L:85 [ARG] 0:174 [A] 3.58 0:161 [A] 69.27
L:85 [ARG] 0:175 [G] 4.31 69.27
L:85 [ARG] 0:390 [G] 4.2 0:399 [C] 69.27
L:85 [ARG] 0:391 [U] 2.77 0:398 [U] 69.27
L:86 [MET] 0:2121 [G] 3.49 0:2273 [C] 55.92
L:86 [MET] 0:2122 [C] 2.95 0:2272 [G] sugar:BB 55.92
L:86 [MET] 0:2123 [A] 4.71 0:2270 [G] 55.92
L:86 [MET] 0:2274 [A] 2.91 0:2120 [U] 55.92
L:86 [MET] 0:2275 [G] 3.79 0:2119 [C] 55.92
L:87 [MET] 0:160 [A] 4.26 0:176 [U] 70.89
L:87 [MET] 0:390 [G] 4.94 0:399 [C] 70.89
L:87 [MET] 0:2122 [C] 3.91 0:2272 [G] 70.89
L:87 [MET] 0:2123 [A] 3.95 0:2270 [G] 70.89
L:88 [VAL] 0:2122 [C] 3.96 0:2272 [G] 50.66
L:88 [VAL] 0:2123 [A] 2.96 0:2270 [G] 50.66
L:89 [ASN] 0:2122 [C] 4.97 0:2272 [G] 32.75
L:89 [ASN] 0:2123 [A] 2.81 0:2270 [G] 32.75
L:89 [ASN] 0:2124 [G] 3.41 0:2269 [C] 32.75
L:89 [ASN] 0:2264 [A] 4.91 0:2129 [U] 32.75
L:89 [ASN] 0:2265 [U] 4.94 0:2128 [G] 32.75
L:90 [ARG] 0:388 [G] 3.58 0:401 [C] 53.58
L:90 [ARG] 0:389 [G] 2.94 0:400 [C] 53.58
L:90 [ARG] 0:2123 [A] 4.54 0:2270 [G] 53.58
L:90 [ARG] 0:2265 [U] 4.16 0:2128 [G] 53.58
L:90 [ARG] 0:2266 [A] 2.63 0:2127 [U] 53.58
L:91 [ILE] 0:159 [G] 4.21 0:177 [A] 26.22
L:91 [ILE] 0:389 [G] 4.26 0:400 [C] 26.22
L:92 [THR] 0:158 [A] 4.88 0:178 [U] 75.97
L:92 [THR] 0:388 [G] 3.64 0:401 [C] 75.97
L:92 [THR] 0:389 [G] 4.06 0:400 [C] 75.97
L:92 [THR] 0:401 [C] 2.73 0:388 [G] base:SC 75.97
L:92 [THR] 0:402 [U] 3.7 0:387 [G] 75.97
L:93 [ARG] 0:158 [A] 3.25 0:178 [U] 39.37
L:93 [ARG] 0:159 [G] 3.8 0:177 [A] 39.37
L:93 [ARG] 0:401 [C] 2.76 0:388 [G] sugar:BB 39.37
L:93 [ARG] 0:1469 [C] 4.02 0:1472 [C] 39.37
L:93 [ARG] 0:1470 [A] 2.58 39.37
L:94 [LYS] 0:157 [G] 4.42 0:179 [C] 3.64
L:94 [LYS] 0:158 [A] 2.8 0:178 [U] 3.64
L:94 [LYS] 0:175 [G] 3.36 3.64
L:94 [LYS] 0:390 [G] 3.96 0:399 [C] 3.64
L:94 [LYS] 0:391 [U] 4.47 0:398 [U] 3.64
L:94 [LYS] 0:400 [C] 3.36 0:389 [G] sugar:BB 3.64
L:94 [LYS] 0:401 [C] 3.7 0:388 [G] 3.64
L:95 [LYS] 0:156 [C] 4.3 0:180 [G] 59.13
L:95 [LYS] 0:157 [G] 3.49 0:179 [C] sugar:SC 59.13
L:95 [LYS] 0:158 [A] 4.4 0:178 [U] 59.13
L:95 [LYS] 0:401 [C] 4.13 0:388 [G] 59.13
L:95 [LYS] 0:402 [U] 4.8 0:387 [G] 59.13
L:95 [LYS] 0:1470 [A] 3.06 sugar:SC 59.13
L:96 [ASN] 0:401 [C] 3.41 0:388 [G] 87.89
L:96 [ASN] 0:402 [U] 3.34 0:387 [G] 87.89
L:97 [ILE] 0:401 [C] 4.4 0:388 [G] 51.21
L:97 [ILE] 0:402 [U] 2.83 0:387 [G] 51.21
L:97 [ILE] 0:403 [C] 4.02 0:386 [G] 51.21
L:99 [ARG] 0:156 [C] 3.26 0:180 [G] sugar:SC 5.44
L:99 [ARG] 0:157 [G] 2.71 0:179 [C] 5.44
L:100 [ILE] 0:1470 [A] 3.64 82.08
L:100 [ILE] 0:1471 [A] 3.4 82.08
L:103 [GLU] 0:156 [C] 4.73 0:180 [G] 65.42
L:103 [GLU] 0:1470 [A] 4.51 65.42
L:103 [GLU] 0:1471 [A] 4.26 65.42
L:104 [ARG] 0:1468 [G] 4.26 0:1474 [C] 90.37
L:104 [ARG] 0:1469 [C] 2.94 0:1472 [C] base/AA stacks 90.37
L:104 [ARG] 0:1470 [A] 4.44 90.37
L:104 [ARG] 0:1471 [A] 2.81 90.37
L:107 [ARG] 0:133 [U] 4.48 0:145 [A] 69.03
L:107 [ARG] 0:181 [G] 3.26 0:155 [C] sugar:SC 69.03
L:107 [ARG] 0:1471 [A] 3.42 69.03
L:107 [ARG] 0:1472 [C] 3.2 0:1469 [C] 69.03
L:108 [LYS] 0:133 [U] 2.68 0:145 [A] sugar:BB 65.56
L:108 [LYS] 0:134 [U] 3.6 0:144 [A] 65.56
L:109 [PHE] 0:133 [U] 4.72 0:145 [A] 52.41
L:109 [PHE] 0:134 [U] 3.32 0:144 [A] 52.41
L:109 [PHE] 0:135 [G] 3.88 0:143 [C] 52.41
L:110 [PRO] 0:133 [U] 3.09 0:145 [A] 62.36
L:110 [PRO] 0:134 [U] 4.31 0:144 [A] 62.36
L:110 [PRO] 0:145 [A] 4.77 0:133 [U] 62.36
L:110 [PRO] 0:146 [U] 3.96 0:132 [A] 62.36
L:111 [ASN] 0:134 [U] 2.54 0:144 [A] sugar:SC 95.58
L:111 [ASN] 0:135 [G] 3.36 0:143 [C] sugar:SC 95.58
L:111 [ASN] 0:144 [A] 4.92 0:134 [U] 95.58
L:111 [ASN] 0:145 [A] 3.3 0:133 [U] 95.58
L:111 [ASN] 0:146 [U] 4.43 0:132 [A] 95.58
L:112 [LEU] 0:134 [U] 4.03 0:144 [A] 57.68
L:112 [LEU] 0:135 [G] 3.74 0:143 [C] 57.68
L:115 [LEU] 0:432 [G] 4.81 0:238 [C] 85.06
L:116 [ASN] 0:431 [G] 3.1 0:239 [C] 84.14
L:116 [ASN] 0:432 [G] 3.57 0:238 [C] 84.14
L:118 [TYR] 0:381 [G] 4.99 98.14
L:119 [SER] 0:381 [G] 4.39 0.0
L:122 [GLU] 0:404 [G] 3.23 0:385 [C] 59.71
L:123 [ASP] 0:2132 [C] 3.8 0:2261 [C] 98.47
L:124 [GLY] 0:2131 [G] 3.05 0:2262 [C] base:BB 87.64
L:124 [GLY] 0:2132 [C] 3.13 0:2261 [C] sugar:BB 87.64
L:124 [GLY] 0:2262 [C] 4.06 0:2131 [G] 87.64
L:124 [GLY] 0:2263 [G] 4.12 0:2130 [C] 87.64
L:125 [ARG] 0:2131 [G] 4.77 0:2262 [C] 36.69
L:125 [ARG] 0:2245 [C] 4.9 0:2256 [G] 36.69
L:125 [ARG] 0:2246 [U] 3.85 0:2255 [A] 36.69
L:125 [ARG] 0:2261 [C] 4.82 0:2132 [C] 36.69
L:125 [ARG] 0:2262 [C] 3.45 0:2131 [G] 36.69
L:125 [ARG] 0:2263 [G] 4.88 0:2130 [C] 36.69
L:127 [LYS] 0:402 [U] 4.7 0:387 [G] 56.82
L:127 [LYS] 0:403 [C] 2.74 0:386 [G] 56.82
L:135 [ASP] 0:135 [G] 2.63 0:143 [C] sugar:SC 92.62
L:135 [ASP] 0:136 [C] 4.85 0:142 [G] 92.62
L:137 [ASP] 0:144 [A] 3.98 0:134 [U] 7.54
L:137 [ASP] 0:145 [A] 3.37 0:133 [U] sugar:SC 7.54
L:138 [HIS] 0:135 [G] 4.42 0:143 [C] 74.01
L:138 [HIS] 0:136 [C] 3.0 0:142 [G] sugar:SC 74.01
L:138 [HIS] 0:251 [C] 3.92 0:258 [G] 74.01
L:139 [PRO] 0:251 [C] 3.31 0:258 [G] 71.49
L:139 [PRO] 0:252 [C] 3.79 0:257 [G] 71.49
L:140 [ALA] 0:250 [C] 3.97 0:259 [G] 45.46
L:140 [ALA] 0:251 [C] 3.51 0:258 [G] 45.46
L:143 [SER] 0:250 [C] 4.75 0:259 [G] 51.84
L:143 [SER] 0:251 [C] 3.63 0:258 [G] 51.84
L:144 [ASP] 0:266 [G] 3.64 0:245 [C] 88.6
L:145 [ASP] 0:239 [C] 4.5 0:431 [G] 39.58
L:145 [ASP] 0:288 [A] 4.53 0:364 [C] 39.58
L:145 [ASP] 0:289 [G] 4.99 0:363 [A] 39.58
L:146 [GLN] 0:239 [C] 4.59 0:431 [G] 31.1
L:146 [GLN] 0:240 [C] 3.06 0:379 [G] 31.1
L:146 [GLN] 0:241 [A] 4.19 0:270 [U] 31.1
L:146 [GLN] 0:266 [G] 4.7 0:245 [C] 31.1
L:146 [GLN] 0:269 [G] 4.38 0:242 [A] 31.1
L:149 [TRP] 0:432 [G] 3.37 0:238 [C] 20.95
L:149 [TRP] 0:433 [C] 3.35 0:237 [G] 20.95
L:153 [THR] 0:183 [A] 3.99 3.32
L:153 [THR] 0:184 [G] 2.85 0:153 [C] 3.32
L:154 [ARG] 0:183 [A] 3.86 7.39
L:154 [ARG] 0:184 [G] 4.42 0:153 [C] 7.39
L:154 [ARG] 0:186 [A] 4.73 7.39
L:154 [ARG] 0:187 [A] 2.64 7.39
L:154 [ARG] 0:188 [C] 3.86 7.39
L:154 [ARG] 0:434 [U] 4.14 0:191 [A] 7.39
L:154 [ARG] 0:435 [A] 2.58 0:190 [G] 7.39
L:154 [ARG] 0:436 [A] 4.6 0:204 [A] 7.39
L:155 [HIS] 0:433 [C] 4.06 0:237 [G] 65.34
L:155 [HIS] 0:434 [U] 3.66 0:191 [A] 65.34
L:156 [ARG] 0:44 [G] 3.64 base:SC 65.73
L:156 [ARG] 0:146 [U] 4.42 0:132 [A] 65.73
L:156 [ARG] 0:182 [G] 4.34 0:154 [C] 65.73
L:156 [ARG] 0:183 [A] 3.66 65.73
L:156 [ARG] 0:184 [G] 3.38 0:153 [C] 65.73
L:157 [LEU] 0:182 [G] 2.57 0:154 [C] 69.89
L:157 [LEU] 0:183 [A] 3.23 69.89
L:158 [ARG] 0:432 [G] 4.17 0:238 [C] 98.24
L:158 [ARG] 0:433 [C] 2.78 0:237 [G] 98.24
L:159 [THR] 0:156 [C] 4.97 0:180 [G] 71.78
L:160 [PHE] 0:155 [C] 4.62 0:181 [G] 29.51
L:160 [PHE] 0:156 [C] 3.55 0:180 [G] 29.51
L:160 [PHE] 0:181 [G] 3.2 0:155 [C] base:BB 29.51
L:160 [PHE] 0:182 [G] 4.21 0:154 [C] 29.51
L:161 [ARG] 0:155 [C] 2.73 0:181 [G] sugar:BB 96.04
L:161 [ARG] 0:156 [C] 3.44 0:180 [G] 96.04
L:161 [ARG] 0:181 [G] 4.25 0:155 [C] 96.04
L:161 [ARG] 0:182 [G] 3.87 0:154 [C] sugar:SC 96.04
L:161 [ARG] 0:183 [A] 3.33 96.04
L:161 [ARG] 0:187 [A] 3.71 96.04
L:161 [ARG] 0:188 [C] 3.03 96.04
L:162 [GLY] 0:155 [C] 4.86 0:181 [G] 83.59
L:162 [GLY] 0:156 [C] 3.98 0:180 [G] 83.59
L:162 [GLY] 0:189 [A] 4.72 83.59
L:163 [LEU] 0:155 [C] 4.64 0:181 [G] 72.04
L:163 [LEU] 0:188 [C] 3.44 72.04
L:163 [LEU] 0:189 [A] 3.93 72.04
L:163 [LEU] 0:433 [C] 4.37 0:237 [G] 72.04
L:164 [THR] 0:432 [G] 4.61 0:238 [C] 91.28
L:165 [SER] 0:431 [G] 4.54 0:239 [C] 78.81
L:165 [SER] 0:432 [G] 3.2 0:238 [C] 78.81
L:168 [ARG] 0:189 [A] 2.9 65.4
L:168 [ARG] 0:190 [G] 4.7 0:435 [A] 65.4
L:168 [ARG] 0:432 [G] 4.41 0:238 [C] 65.4
L:168 [ARG] 0:433 [C] 3.0 0:237 [G] 65.4
L:169 [ARG] 0:400 [C] 3.52 0:389 [G] 69.92
L:169 [ARG] 0:430 [A] 4.42 69.92
L:169 [ARG] 0:431 [G] 4.17 0:239 [C] 69.92
L:170 [CYS] 0:157 [G] 4.01 0:179 [C] 54.5
L:170 [CYS] 0:400 [C] 3.56 0:389 [G] 54.5
L:170 [CYS] 0:401 [C] 4.15 0:388 [G] 54.5
L:171 [ARG] 0:155 [C] 3.31 0:181 [G] 88.98
L:171 [ARG] 0:156 [C] 2.65 0:180 [G] 88.98
L:171 [ARG] 0:157 [G] 4.0 0:179 [C] 88.98
L:171 [ARG] 0:188 [C] 3.37 sugar:SC 88.98
L:171 [ARG] 0:189 [A] 2.47 88.98
L:171 [ARG] 0:399 [C] 4.78 0:390 [G] 88.98
L:171 [ARG] 0:400 [C] 4.76 0:389 [G] 88.98
L:172 [GLY] 0:399 [C] 3.53 0:390 [G] 65.95
L:172 [GLY] 0:400 [C] 3.77 0:389 [G] 65.95
L:173 [LEU] 0:189 [A] 3.9 67.52
L:173 [LEU] 0:190 [G] 3.59 0:435 [A] 67.52
L:174 [ARG] 0:193 [A] 3.8 39.66
L:174 [ARG] 0:382 [U] 4.52 0:407 [A] 39.66
L:174 [ARG] 0:383 [A] 2.68 0:406 [G] 39.66
L:174 [ARG] 0:400 [C] 4.3 0:389 [G] 39.66
L:176 [GLN] 0:190 [G] 3.98 0:435 [A] 67.59
L:176 [GLN] 0:191 [A] 3.38 0:434 [U] 67.59
L:176 [GLN] 0:192 [A] 2.76 0:203 [G] sugar:SC 67.59
L:176 [GLN] 0:193 [A] 3.28 67.59
L:176 [GLN] 0:194 [A] 3.54 0:202 [U] 67.59
L:176 [GLN] 0:204 [A] 3.65 0:436 [A] sugar:SC 67.59
L:176 [GLN] 0:205 [U] 4.33 0:437 [A] 67.59
L:177 [GLY] 0:194 [A] 3.38 0:202 [U] 61.43
L:177 [GLY] 0:195 [C] 3.6 0:201 [G] 61.43
L:178 [LYS] 0:194 [A] 4.2 0:202 [U] 36.44
L:178 [LYS] 0:195 [C] 2.82 0:201 [G] 36.44
L:178 [LYS] 0:394 [G] 3.58 36.44
L:178 [LYS] 0:397 [A] 4.71 36.44
L:178 [LYS] 0:398 [U] 4.66 0:391 [U] 36.44
L:178 [LYS] 0:399 [C] 3.89 0:390 [G] 36.44
L:178 [LYS] 0:415 [A] 4.92 0:425 [U] 36.44
L:178 [LYS] 0:416 [G] 2.75 0:424 [C] 36.44
L:178 [LYS] 0:417 [G] 3.0 sugar:SC 36.44
L:179 [GLY] 0:394 [G] 3.62 58.75
L:179 [GLY] 0:398 [U] 2.95 0:391 [U] sugar:BB 58.75
L:179 [GLY] 0:399 [C] 3.23 0:390 [G] 58.75
L:180 [SER] 0:398 [U] 4.8 0:391 [U] 41.73
L:180 [SER] 0:399 [C] 4.83 0:390 [G] 41.73
L:181 [GLU] 0:226 [A] 4.01 0:214 [U] 55.41
L:181 [GLU] 0:227 [A] 3.52 0:212 [A] 55.41
L:181 [GLU] 0:393 [G] 3.37 55.41
L:181 [GLU] 0:394 [G] 2.67 base:SC, base:SC 55.41
L:181 [GLU] 0:398 [U] 4.22 0:391 [U] 55.41
L:181 [GLU] 0:417 [G] 4.89 55.41
L:182 [LYS] 0:226 [A] 3.59 0:214 [U] sugar:SC 66.45
L:182 [LYS] 0:392 [U] 3.17 66.45
L:182 [LYS] 0:393 [G] 2.85 base:SC 66.45
L:182 [LYS] 0:394 [G] 2.97 base:SC 66.45
L:183 [VAL] 0:399 [C] 3.93 0:390 [G] 1.77
L:184 [ARG] 0:189 [A] 3.02 67.84
L:184 [ARG] 0:190 [G] 3.12 0:435 [A] 67.84
L:184 [ARG] 0:205 [U] 3.45 0:437 [A] 67.84
L:184 [ARG] 0:206 [G] 3.5 0:233 [U] 67.84
L:185 [PRO] 0:188 [C] 2.68 sugar:BB 59.35
L:185 [PRO] 0:189 [A] 3.16 sugar:BB 59.35
L:185 [PRO] 0:206 [G] 3.76 0:233 [U] 59.35
L:185 [PRO] 0:207 [U] 3.92 0:232 [A] 59.35
L:186 [SER] 0:154 [C] 4.86 0:182 [G] 82.99
L:186 [SER] 0:155 [C] 2.52 0:181 [G] 82.99
L:186 [SER] 0:156 [C] 3.79 0:180 [G] 82.99
L:186 [SER] 0:188 [C] 3.39 82.99
L:187 [LEU] 0:155 [C] 4.68 0:181 [G] 3.8
L:187 [LEU] 0:156 [C] 3.11 0:180 [G] 3.8
L:187 [LEU] 0:157 [G] 3.43 0:179 [C] 3.8
L:188 [ARG] 0:153 [C] 4.84 0:184 [G] 74.51
L:188 [ARG] 0:154 [C] 2.86 0:182 [G] 74.51
L:188 [ARG] 0:155 [C] 2.51 0:181 [G] 74.51
L:188 [ARG] 0:156 [C] 2.92 0:180 [G] 74.51
L:189 [VAL] 0:155 [C] 3.37 0:181 [G] 71.84
L:189 [VAL] 0:156 [C] 4.94 0:180 [G] 71.84
L:189 [VAL] 0:207 [U] 4.35 0:232 [A] 71.84
L:191 [GLY] 0:175 [G] 3.02 4.99
L:191 [GLY] 0:176 [U] 3.71 0:160 [A] 4.99
L:192 [ALA] 0:159 [G] 4.59 0:177 [A] 51.36
L:192 [ALA] 0:175 [G] 3.05 51.36
L:192 [ALA] 0:176 [U] 4.55 0:160 [A] 51.36
L:193 [LYS] 0:175 [G] 3.88 20.75
L:193 [LYS] 0:225 [G] 4.27 0:215 [A] 20.75
L:193 [LYS] 0:391 [U] 3.09 0:398 [U] 20.75
L:193 [LYS] 0:392 [U] 3.16 sugar:BB 20.75
L:193 [LYS] 0:393 [G] 4.23 20.75
L:194 [ALA] 0:390 [G] 3.95 0:399 [C] base:BB 68.69
L:194 [ALA] 0:391 [U] 3.93 0:398 [U] 68.69
L:194 [ALA] 0:399 [C] 3.81 0:390 [G] 68.69
L:194 [ALA] 0:400 [C] 4.87 0:389 [G] 68.69

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group106 1JJ2_L_0 L: Ribosomal protein l15e, Haloarcula marismortui (natural) 0: 23s rRNA, Haloarcula marismortui (natural) P60618 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_L_0 3CC2_M_0 0.97 1.0 0.17 0.72 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA compare
1JJ2_L_0 1YHQ_M_0 0.97 1.0 0.2 0.71 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA compare
1JJ2_L_0 7O7Y_BN_B5,B8 0.70 0.94 2.07 0.36 Ribosomal proteins S24e, L23 and L15e compare
1JJ2_L_0 1VQ8_M_0 0.97 1.0 0.3 0.71 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA compare
1JJ2_L_0 6AZ3_M_1,7 0.72 0.72 1.83 0.35 Ribosomal proteins S24e, L23 and L15e compare
1JJ2_L_0 6AZ3_M_2 0.60 0.83 2.3 0.19 Ribosomal proteins S24e, L23 and L15e compare