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All interfaces > All interologs > Interface groups > group106 > 1YHQ_M_0

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Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

1YHQ_M
1YHQ_0
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
M:1 [ALA] 0:243 [A] 3.28 66.92
M:1 [ALA] 0:244 [C] 2.77 0:267 [G] 66.92
M:1 [ALA] 0:376 [C] 2.87 0:274 [G] sugar:BB 66.92
M:1 [ALA] 0:377 [C] 3.88 0:273 [G] 66.92
M:2 [ARG] 0:376 [C] 4.48 0:274 [G] 75.55
M:2 [ARG] 0:377 [C] 3.81 0:273 [G] 75.55
M:3 [SER] 0:242 [A] 3.25 0:269 [G] 62.41
M:3 [SER] 0:243 [A] 3.02 62.41
M:5 [TYR] 0:242 [A] 3.56 0:269 [G] 52.17
M:5 [TYR] 0:243 [A] 4.88 52.17
M:5 [TYR] 0:264 [G] 2.69 0:247 [A] 52.17
M:6 [SER] 0:378 [A] 4.79 0:271 [C] 57.03
M:9 [ARG] 0:377 [C] 4.86 0:273 [G] 44.19
M:9 [ARG] 0:378 [A] 2.44 0:271 [C] 44.19
M:9 [ARG] 0:379 [G] 3.91 0:240 [C] 44.19
M:9 [ARG] 0:380 [A] 2.96 0:408 [A] 44.19
M:12 [TRP] 0:380 [A] 3.8 0:408 [A] 40.67
M:13 [GLU] 0:380 [A] 3.58 0:408 [A] base/AA stacks 52.19
M:13 [GLU] 0:381 [G] 3.54 52.19
M:13 [GLU] 0:409 [U] 3.3 base:SC 52.19
M:14 [ASN] 0:381 [G] 4.16 36.92
M:14 [ASN] 0:407 [A] 3.53 0:382 [U] 36.92
M:15 [PRO] 0:381 [G] 3.43 44.87
M:16 [GLY] 0:381 [G] 4.75 0.81
M:25 [TRP] 0:2133 [U] 3.93 0:2260 [A] 63.25
M:25 [TRP] 0:2243 [C] 3.8 63.25
M:25 [TRP] 0:2244 [A] 3.49 0:2257 [G] sugar:SC 63.25
M:28 [GLN] 0:2245 [C] 4.88 0:2256 [G] 67.68
M:29 [GLN] 0:2244 [A] 3.56 0:2257 [G] 60.39
M:29 [GLN] 0:2245 [C] 3.79 0:2256 [G] 60.39
M:32 [ARG] 0:2132 [C] 4.8 0:2261 [C] 98.09
M:32 [ARG] 0:2133 [U] 4.9 0:2260 [A] 98.09
M:32 [ARG] 0:2244 [A] 3.04 0:2257 [G] 98.09
M:32 [ARG] 0:2245 [C] 2.82 0:2256 [G] 98.09
M:35 [GLY] 0:1467 [C] 3.28 0:1475 [G] 44.14
M:36 [ALA] 0:1467 [C] 2.79 0:1475 [G] 62.23
M:36 [ALA] 0:1468 [G] 3.71 0:1474 [C] 62.23
M:37 [VAL] 0:1467 [C] 4.58 0:1475 [G] 70.59
M:39 [ARG] 0:134 [U] 4.73 0:144 [A] 80.89
M:39 [ARG] 0:135 [G] 2.55 0:143 [C] 80.89
M:39 [ARG] 0:136 [C] 2.68 0:142 [G] 80.89
M:42 [ARG] 0:261 [A] 2.77 52.93
M:42 [ARG] 0:262 [A] 3.06 52.93
M:42 [ARG] 0:263 [U] 2.81 sugar:SC 52.93
M:45 [ARG] 0:380 [A] 4.1 0:408 [A] 87.76
M:45 [ARG] 0:381 [G] 2.57 87.76
M:46 [LEU] 0:263 [U] 3.53 62.18
M:46 [LEU] 0:264 [G] 3.24 0:247 [A] 62.18
M:47 [ASP] 0:241 [A] 4.59 0:270 [U] 73.78
M:47 [ASP] 0:380 [A] 4.72 0:408 [A] 73.78
M:48 [LYS] 0:379 [G] 3.82 0:240 [C] 87.32
M:48 [LYS] 0:380 [A] 2.96 0:408 [A] 87.32
M:48 [LYS] 0:381 [G] 3.52 87.32
M:48 [LYS] 0:430 [A] 4.36 87.32
M:48 [LYS] 0:431 [G] 2.64 0:239 [C] 87.32
M:50 [ARG] 0:241 [A] 3.52 0:270 [U] 90.7
M:50 [ARG] 0:242 [A] 3.04 0:269 [G] 90.7
M:50 [ARG] 0:264 [G] 2.88 0:247 [A] 90.7
M:50 [ARG] 0:265 [U] 2.77 0:248 [A] 90.7
M:51 [SER] 0:240 [C] 4.62 0:379 [G] 54.69
M:51 [SER] 0:241 [A] 3.48 0:270 [U] 54.69
M:51 [SER] 0:379 [G] 2.86 0:240 [C] base:BB, base:SC 54.69
M:51 [SER] 0:431 [G] 3.56 0:239 [C] 54.69
M:52 [GLN] 0:431 [G] 3.05 0:239 [C] 76.09
M:53 [GLY] 0:431 [G] 4.61 0:239 [C] 98.79
M:54 [TYR] 0:264 [G] 4.08 0:247 [A] 90.7
M:55 [LYS] 0:241 [A] 4.84 0:270 [U] 87.94
M:55 [LYS] 0:265 [U] 3.74 0:248 [A] 87.94
M:55 [LYS] 0:266 [G] 3.21 0:245 [C] 87.94
M:56 [ALA] 0:260 [C] 4.46 0:249 [G] 92.52
M:56 [ALA] 0:261 [A] 3.5 92.52
M:56 [ALA] 0:262 [A] 4.67 92.52
M:56 [ALA] 0:264 [G] 3.75 0:247 [A] 92.52
M:56 [ALA] 0:265 [U] 2.91 0:248 [A] 92.52
M:57 [LYS] 0:250 [C] 3.91 0:259 [G] 95.93
M:57 [LYS] 0:260 [C] 4.25 0:249 [G] 95.93
M:57 [LYS] 0:261 [A] 4.89 95.93
M:57 [LYS] 0:265 [U] 4.61 0:248 [A] 95.93
M:57 [LYS] 0:266 [G] 3.71 0:245 [C] 95.93
M:58 [GLN] 0:136 [C] 3.41 0:142 [G] 71.53
M:58 [GLN] 0:137 [U] 3.18 0:140 [G] 71.53
M:58 [GLN] 0:250 [C] 4.01 0:259 [G] 71.53
M:58 [GLN] 0:251 [C] 3.73 0:258 [G] 71.53
M:58 [GLN] 0:259 [G] 2.79 0:250 [C] base:SC 71.53
M:58 [GLN] 0:260 [C] 3.75 0:249 [G] 71.53
M:59 [GLY] 0:135 [G] 4.24 0:143 [C] 98.35
M:59 [GLY] 0:136 [C] 4.21 0:142 [G] 98.35
M:61 [ILE] 0:135 [G] 3.6 0:143 [C] 66.49
M:61 [ILE] 0:136 [C] 4.47 0:142 [G] 66.49
M:66 [SER] 0:1468 [G] 4.41 0:1474 [C] 86.56
M:68 [ARG] 0:1469 [C] 3.31 0:1472 [C] 52.15
M:68 [ARG] 0:1470 [A] 2.92 52.15
M:69 [LYS] 0:402 [U] 4.6 0:387 [G] 81.22
M:69 [LYS] 0:403 [C] 3.23 0:386 [G] 81.22
M:69 [LYS] 0:404 [G] 2.95 0:385 [C] 81.22
M:69 [LYS] 0:2131 [G] 4.49 0:2262 [C] 81.22
M:69 [LYS] 0:2263 [G] 3.7 0:2130 [C] 81.22
M:70 [GLY] 0:402 [U] 3.34 0:387 [G] 96.58
M:70 [GLY] 0:403 [C] 3.0 0:386 [G] 96.58
M:70 [GLY] 0:2263 [G] 3.33 0:2130 [C] 96.58
M:70 [GLY] 0:2264 [A] 3.89 0:2129 [U] 96.58
M:71 [SER] 0:402 [U] 3.81 0:387 [G] 70.11
M:71 [SER] 0:2263 [G] 3.94 0:2130 [C] 70.11
M:71 [SER] 0:2264 [A] 2.55 0:2129 [U] 70.11
M:72 [ALA] 0:1470 [A] 3.91 72.42
M:73 [ARG] 0:1469 [C] 3.86 0:1472 [C] 48.61
M:73 [ARG] 0:1470 [A] 3.12 48.61
M:73 [ARG] 0:1864 [C] 3.22 48.61
M:73 [ARG] 0:1865 [A] 3.97 48.61
M:73 [ARG] 0:2263 [G] 3.43 0:2130 [C] 48.61
M:74 [LYS] 0:158 [A] 4.93 0:178 [U] 73.91
M:74 [LYS] 0:159 [G] 3.3 0:177 [A] 73.91
M:74 [LYS] 0:1864 [C] 3.44 73.91
M:75 [ARG] 0:1863 [G] 3.6 0:1866 [A] 35.58
M:75 [ARG] 0:1864 [C] 2.75 base/AA stacks 35.58
M:76 [ARG] 0:1864 [C] 4.92 66.43
M:76 [ARG] 0:2121 [G] 3.87 0:2273 [C] 66.43
M:76 [ARG] 0:2122 [C] 2.93 0:2272 [G] base:SC, sugar:SC 66.43
M:76 [ARG] 0:2123 [A] 3.53 0:2270 [G] sugar:SC 66.43
M:76 [ARG] 0:2272 [G] 3.74 0:2122 [C] 66.43
M:76 [ARG] 0:2273 [C] 2.84 0:2121 [G] base:SC, sugar:SC 66.43
M:76 [ARG] 0:2274 [A] 4.24 0:2120 [U] 66.43
M:77 [HIS] 0:2122 [C] 4.26 0:2272 [G] 64.99
M:77 [HIS] 0:2273 [C] 4.45 0:2121 [G] 64.99
M:77 [HIS] 0:2274 [A] 3.39 0:2120 [U] sugar:SC 64.99
M:78 [LYS] 0:869 [G] 3.54 8.38
M:78 [LYS] 0:870 [G] 3.43 0:880 [C] 8.38
M:79 [ALA] 0:770 [C] 3.66 0:891 [G] 41.56
M:79 [ALA] 0:771 [G] 3.45 0:890 [C] 41.56
M:79 [ALA] 0:2274 [A] 4.19 0:2120 [U] 41.56
M:80 [GLY] 0:160 [A] 4.42 0:176 [U] 83.64
M:80 [GLY] 0:161 [A] 3.65 0:174 [A] 83.64
M:80 [GLY] 0:769 [C] 4.62 0:892 [G] 83.64
M:80 [GLY] 0:770 [C] 2.7 0:891 [G] 83.64
M:80 [GLY] 0:2274 [A] 3.33 0:2120 [U] 83.64
M:80 [GLY] 0:2275 [G] 3.44 0:2119 [C] 83.64
M:81 [ARG] 0:160 [A] 3.15 0:176 [U] 93.04
M:81 [ARG] 0:161 [A] 3.39 0:174 [A] 93.04
M:81 [ARG] 0:770 [C] 2.99 0:891 [G] 93.04
M:81 [ARG] 0:771 [G] 3.02 0:890 [C] 93.04
M:81 [ARG] 0:2274 [A] 2.79 0:2120 [U] sugar:BB, sugar:BB 93.04
M:81 [ARG] 0:2275 [G] 3.21 0:2119 [C] 93.04
M:82 [ARG] 0:161 [A] 2.93 0:174 [A] 86.41
M:82 [ARG] 0:169 [A] 4.87 86.41
M:82 [ARG] 0:170 [U] 2.93 0:221 [G] 86.41
M:82 [ARG] 0:171 [C] 2.81 0:164 [G] 86.41
M:82 [ARG] 0:172 [U] 3.28 0:163 [U] 86.41
M:82 [ARG] 0:173 [C] 3.94 0:162 [C] 86.41
M:82 [ARG] 0:2274 [A] 4.94 0:2120 [U] 86.41
M:82 [ARG] 0:2275 [G] 4.35 0:2119 [C] 86.41
M:83 [SER] 0:169 [A] 3.68 70.61
M:83 [SER] 0:170 [U] 2.63 0:221 [G] 70.61
M:83 [SER] 0:2121 [G] 3.56 0:2273 [C] 70.61
M:83 [SER] 0:2122 [C] 4.63 0:2272 [G] 70.61
M:84 [LYS] 0:170 [U] 2.93 0:221 [G] 70.28
M:84 [LYS] 0:171 [C] 3.32 0:164 [G] 70.28
M:84 [LYS] 0:390 [G] 3.5 0:399 [C] 70.28
M:84 [LYS] 0:391 [U] 2.68 0:398 [U] 70.28
M:85 [ARG] 0:160 [A] 3.31 0:176 [U] 68.39
M:85 [ARG] 0:161 [A] 4.07 0:174 [A] 68.39
M:85 [ARG] 0:174 [A] 3.64 0:161 [A] 68.39
M:85 [ARG] 0:175 [G] 4.2 68.39
M:85 [ARG] 0:390 [G] 4.16 0:399 [C] 68.39
M:85 [ARG] 0:391 [U] 2.66 0:398 [U] 68.39
M:86 [GLN] 0:2121 [G] 3.04 0:2273 [C] base:SC 52.85
M:86 [GLN] 0:2122 [C] 2.83 0:2272 [G] sugar:BB 52.85
M:86 [GLN] 0:2123 [A] 4.65 0:2270 [G] 52.85
M:86 [GLN] 0:2273 [C] 4.8 0:2121 [G] 52.85
M:86 [GLN] 0:2274 [A] 3.21 0:2120 [U] base:SC 52.85
M:86 [GLN] 0:2275 [G] 4.11 0:2119 [C] 52.85
M:87 [GLY] 0:2122 [C] 3.64 0:2272 [G] 64.59
M:87 [GLY] 0:2123 [A] 3.86 0:2270 [G] 64.59
M:88 [VAL] 0:2122 [C] 3.91 0:2272 [G] 58.18
M:88 [VAL] 0:2123 [A] 2.88 0:2270 [G] 58.18
M:89 [THR] 0:2123 [A] 2.78 0:2270 [G] 33.66
M:89 [THR] 0:2124 [G] 4.02 0:2269 [C] 33.66
M:89 [THR] 0:2264 [A] 4.92 0:2129 [U] 33.66
M:89 [THR] 0:2265 [U] 4.45 0:2128 [G] 33.66
M:90 [ARG] 0:388 [G] 3.44 0:401 [C] 46.58
M:90 [ARG] 0:389 [G] 2.79 0:400 [C] sugar:BB 46.58
M:90 [ARG] 0:2123 [A] 4.49 0:2270 [G] 46.58
M:90 [ARG] 0:2265 [U] 4.21 0:2128 [G] 46.58
M:90 [ARG] 0:2266 [A] 2.49 0:2127 [U] 46.58
M:91 [ILE] 0:159 [G] 4.25 0:177 [A] 50.93
M:91 [ILE] 0:389 [G] 4.37 0:400 [C] 50.93
M:92 [THR] 0:158 [A] 4.93 0:178 [U] 75.33
M:92 [THR] 0:388 [G] 3.65 0:401 [C] 75.33
M:92 [THR] 0:389 [G] 4.07 0:400 [C] 75.33
M:92 [THR] 0:401 [C] 2.82 0:388 [G] base:SC 75.33
M:92 [THR] 0:402 [U] 3.6 0:387 [G] 75.33
M:93 [ARG] 0:158 [A] 3.12 0:178 [U] 59.54
M:93 [ARG] 0:159 [G] 3.76 0:177 [A] 59.54
M:93 [ARG] 0:401 [C] 2.85 0:388 [G] sugar:BB 59.54
M:93 [ARG] 0:1469 [C] 4.17 0:1472 [C] 59.54
M:93 [ARG] 0:1470 [A] 2.55 59.54
M:94 [ARG] 0:157 [G] 4.37 0:179 [C] 22.06
M:94 [ARG] 0:158 [A] 2.73 0:178 [U] 22.06
M:94 [ARG] 0:175 [G] 2.91 base:SC, base:SC 22.06
M:94 [ARG] 0:390 [G] 3.74 0:399 [C] 22.06
M:94 [ARG] 0:391 [U] 3.65 0:398 [U] 22.06
M:94 [ARG] 0:400 [C] 3.42 0:389 [G] sugar:BB 22.06
M:94 [ARG] 0:401 [C] 3.63 0:388 [G] 22.06
M:95 [LYS] 0:156 [C] 4.43 0:180 [G] 72.96
M:95 [LYS] 0:157 [G] 3.51 0:179 [C] 72.96
M:95 [LYS] 0:158 [A] 4.44 0:178 [U] 72.96
M:95 [LYS] 0:401 [C] 3.96 0:388 [G] 72.96
M:95 [LYS] 0:402 [U] 4.67 0:387 [G] 72.96
M:95 [LYS] 0:1470 [A] 3.09 sugar:SC 72.96
M:96 [ASP] 0:401 [C] 3.33 0:388 [G] 82.89
M:96 [ASP] 0:402 [U] 3.3 0:387 [G] 82.89
M:97 [ILE] 0:401 [C] 4.3 0:388 [G] 60.71
M:97 [ILE] 0:402 [U] 2.72 0:387 [G] 60.71
M:97 [ILE] 0:403 [C] 4.12 0:386 [G] 60.71
M:99 [ARG] 0:156 [C] 3.01 0:180 [G] sugar:SC 0.0
M:99 [ARG] 0:157 [G] 2.74 0:179 [C] 0.0
M:100 [VAL] 0:1470 [A] 3.71 82.68
M:100 [VAL] 0:1471 [A] 3.41 82.68
M:103 [GLU] 0:156 [C] 4.55 0:180 [G] 66.08
M:103 [GLU] 0:1470 [A] 4.54 66.08
M:103 [GLU] 0:1471 [A] 4.38 66.08
M:104 [ARG] 0:1468 [G] 4.31 0:1474 [C] 93.88
M:104 [ARG] 0:1469 [C] 2.99 0:1472 [C] base/AA stacks 93.88
M:104 [ARG] 0:1470 [A] 4.54 93.88
M:104 [ARG] 0:1471 [A] 2.82 93.88
M:107 [ARG] 0:133 [U] 4.43 0:145 [A] 67.69
M:107 [ARG] 0:181 [G] 3.69 0:155 [C] sugar:SC 67.69
M:107 [ARG] 0:1471 [A] 3.1 67.69
M:107 [ARG] 0:1472 [C] 3.02 0:1469 [C] 67.69
M:108 [THR] 0:133 [U] 2.69 0:145 [A] sugar:BB 68.04
M:108 [THR] 0:134 [U] 3.71 0:144 [A] 68.04
M:109 [PHE] 0:133 [U] 4.75 0:145 [A] 55.79
M:109 [PHE] 0:134 [U] 3.36 0:144 [A] 55.79
M:109 [PHE] 0:135 [G] 3.86 0:143 [C] 55.79
M:110 [PRO] 0:133 [U] 3.05 0:145 [A] 53.29
M:110 [PRO] 0:134 [U] 4.3 0:144 [A] 53.29
M:110 [PRO] 0:145 [A] 4.73 0:133 [U] 53.29
M:110 [PRO] 0:146 [U] 3.95 0:132 [A] 53.29
M:111 [ASN] 0:134 [U] 2.48 0:144 [A] sugar:SC 98.87
M:111 [ASN] 0:135 [G] 3.35 0:143 [C] sugar:SC 98.87
M:111 [ASN] 0:144 [A] 4.99 0:134 [U] 98.87
M:111 [ASN] 0:145 [A] 3.31 0:133 [U] 98.87
M:111 [ASN] 0:146 [U] 4.5 0:132 [A] 98.87
M:112 [LEU] 0:134 [U] 4.07 0:144 [A] 68.08
M:112 [LEU] 0:135 [G] 3.91 0:143 [C] 68.08
M:115 [LEU] 0:432 [G] 4.91 0:238 [C] 87.5
M:116 [ASN] 0:431 [G] 3.1 0:239 [C] 84.78
M:116 [ASN] 0:432 [G] 3.56 0:238 [C] 84.78
M:119 [SER] 0:381 [G] 4.54 0.0
M:122 [GLN] 0:404 [G] 3.24 0:385 [C] 62.58
M:123 [ASP] 0:2132 [C] 3.79 0:2261 [C] 98.9
M:124 [GLY] 0:2131 [G] 3.02 0:2262 [C] base:BB 93.46
M:124 [GLY] 0:2132 [C] 3.1 0:2261 [C] sugar:BB 93.46
M:124 [GLY] 0:2262 [C] 4.19 0:2131 [G] 93.46
M:124 [GLY] 0:2263 [G] 4.19 0:2130 [C] 93.46
M:125 [ARG] 0:2131 [G] 4.61 0:2262 [C] 47.33
M:125 [ARG] 0:2246 [U] 4.58 0:2255 [A] 47.33
M:125 [ARG] 0:2262 [C] 3.49 0:2131 [G] 47.33
M:125 [ARG] 0:2263 [G] 4.89 0:2130 [C] 47.33
M:127 [LYS] 0:402 [U] 4.78 0:387 [G] 53.09
M:127 [LYS] 0:403 [C] 2.68 0:386 [G] 53.09
M:135 [ASP] 0:135 [G] 2.53 0:143 [C] sugar:SC 92.0
M:135 [ASP] 0:136 [C] 4.92 0:142 [G] 92.0
M:137 [ASN] 0:144 [A] 4.0 0:134 [U] 38.38
M:137 [ASN] 0:145 [A] 3.23 0:133 [U] sugar:SC 38.38
M:138 [HIS] 0:135 [G] 4.54 0:143 [C] 70.49
M:138 [HIS] 0:136 [C] 3.13 0:142 [G] sugar:SC 70.49
M:138 [HIS] 0:251 [C] 3.69 0:258 [G] 70.49
M:139 [PRO] 0:251 [C] 3.41 0:258 [G] 84.96
M:139 [PRO] 0:252 [C] 3.71 0:257 [G] 84.96
M:140 [ALA] 0:250 [C] 4.35 0:259 [G] 39.7
M:140 [ALA] 0:251 [C] 3.78 0:258 [G] 39.7
M:143 [ASN] 0:250 [C] 4.77 0:259 [G] 48.74
M:143 [ASN] 0:251 [C] 3.43 0:258 [G] 48.74
M:144 [ASP] 0:266 [G] 3.82 0:245 [C] 85.0
M:145 [ASP] 0:239 [C] 4.58 0:431 [G] 39.71
M:145 [ASP] 0:288 [A] 4.46 0:364 [U] 39.71
M:146 [ASP] 0:239 [C] 3.53 0:431 [G] sugar:SC 21.85
M:146 [ASP] 0:240 [C] 3.38 0:379 [G] 21.85
M:146 [ASP] 0:241 [A] 4.86 0:270 [U] 21.85
M:149 [TRP] 0:432 [G] 3.41 0:238 [C] 35.4
M:149 [TRP] 0:433 [C] 3.36 0:237 [G] 35.4
M:153 [ASP] 0:183 [A] 3.9 1.33
M:153 [ASP] 0:184 [G] 4.13 0:153 [C] 1.33
M:153 [ASP] 0:185 [G] 4.94 0:152 [A] 1.33
M:154 [ASP] 0:183 [A] 3.79 3.15
M:154 [ASP] 0:184 [G] 4.36 0:153 [C] 3.15
M:154 [ASP] 0:187 [A] 4.41 3.15
M:154 [ASP] 0:188 [C] 3.73 3.15
M:154 [ASP] 0:434 [U] 4.09 0:191 [A] 3.15
M:155 [GLN] 0:433 [C] 4.08 0:237 [G] 69.09
M:155 [GLN] 0:434 [U] 3.23 0:191 [A] 69.09
M:156 [ALA] 0:182 [G] 4.3 0:154 [C] 60.08
M:156 [ALA] 0:183 [A] 3.69 60.08
M:157 [ASP] 0:182 [G] 2.7 0:154 [C] 59.25
M:157 [ASP] 0:183 [A] 3.06 59.25
M:158 [ARG] 0:432 [G] 4.45 0:238 [C] 96.32
M:158 [ARG] 0:433 [C] 3.0 0:237 [G] 96.32
M:160 [PHE] 0:155 [C] 4.62 0:181 [G] 24.95
M:160 [PHE] 0:156 [C] 3.51 0:180 [G] 24.95
M:160 [PHE] 0:181 [G] 3.19 0:155 [C] base:BB 24.95
M:160 [PHE] 0:182 [G] 4.05 0:154 [C] 24.95
M:161 [ARG] 0:155 [C] 2.77 0:181 [G] sugar:BB 97.15
M:161 [ARG] 0:156 [C] 3.43 0:180 [G] 97.15
M:161 [ARG] 0:181 [G] 4.12 0:155 [C] 97.15
M:161 [ARG] 0:182 [G] 3.56 0:154 [C] 97.15
M:161 [ARG] 0:183 [A] 3.3 97.15
M:161 [ARG] 0:187 [A] 3.72 97.15
M:161 [ARG] 0:188 [C] 3.03 97.15
M:162 [GLY] 0:155 [C] 4.9 0:181 [G] 88.39
M:162 [GLY] 0:156 [C] 3.94 0:180 [G] 88.39
M:162 [GLY] 0:189 [A] 4.77 88.39
M:163 [LEU] 0:155 [C] 4.71 0:181 [G] 54.53
M:163 [LEU] 0:188 [C] 3.52 54.53
M:163 [LEU] 0:189 [A] 4.03 54.53
M:163 [LEU] 0:433 [C] 4.33 0:237 [G] 54.53
M:164 [THR] 0:432 [G] 4.5 0:238 [C] 89.95
M:165 [GLY] 0:432 [G] 3.06 0:238 [C] 79.72
M:168 [ARG] 0:189 [A] 2.84 71.47
M:168 [ARG] 0:190 [G] 4.52 0:435 [A] 71.47
M:168 [ARG] 0:432 [G] 4.38 0:238 [C] 71.47
M:168 [ARG] 0:433 [C] 2.99 0:237 [G] 71.47
M:169 [ARG] 0:400 [C] 3.71 0:389 [G] 69.14
M:169 [ARG] 0:430 [A] 4.4 69.14
M:169 [ARG] 0:431 [G] 4.09 0:239 [C] 69.14
M:170 [ASN] 0:157 [G] 3.5 0:179 [C] 65.36
M:170 [ASN] 0:400 [C] 3.01 0:389 [G] 65.36
M:170 [ASN] 0:401 [C] 3.11 0:388 [G] 65.36
M:171 [ARG] 0:155 [C] 3.29 0:181 [G] 88.91
M:171 [ARG] 0:156 [C] 2.64 0:180 [G] 88.91
M:171 [ARG] 0:157 [G] 3.98 0:179 [C] 88.91
M:171 [ARG] 0:188 [C] 3.34 sugar:SC 88.91
M:171 [ARG] 0:189 [A] 2.51 88.91
M:171 [ARG] 0:399 [C] 4.85 0:390 [G] 88.91
M:171 [ARG] 0:400 [C] 4.74 0:389 [G] 88.91
M:172 [GLY] 0:399 [C] 3.5 0:390 [G] 71.94
M:172 [GLY] 0:400 [C] 3.82 0:389 [G] 71.94
M:173 [LEU] 0:189 [A] 4.06 76.87
M:173 [LEU] 0:190 [G] 3.59 0:435 [A] 76.87
M:174 [SER] 0:193 [A] 3.8 50.25
M:174 [SER] 0:400 [C] 4.75 0:389 [G] 50.25
M:176 [LYS] 0:190 [G] 3.61 0:435 [A] 76.82
M:176 [LYS] 0:191 [A] 3.18 0:434 [U] 76.82
M:176 [LYS] 0:192 [A] 3.33 0:203 [G] 76.82
M:176 [LYS] 0:193 [A] 3.69 76.82
M:176 [LYS] 0:194 [A] 3.65 0:202 [U] 76.82
M:176 [LYS] 0:204 [A] 2.77 0:436 [A] sugar:SC 76.82
M:176 [LYS] 0:205 [U] 4.4 0:437 [A] 76.82
M:177 [GLY] 0:194 [A] 3.3 0:202 [U] 72.53
M:177 [GLY] 0:195 [C] 3.6 0:201 [G] 72.53
M:178 [LYS] 0:194 [A] 4.2 0:202 [U] 54.16
M:178 [LYS] 0:195 [C] 2.86 0:201 [G] 54.16
M:178 [LYS] 0:394 [G] 3.57 54.16
M:178 [LYS] 0:397 [A] 4.82 54.16
M:178 [LYS] 0:398 [U] 4.68 0:391 [U] 54.16
M:178 [LYS] 0:399 [C] 3.9 0:390 [G] 54.16
M:178 [LYS] 0:415 [A] 4.98 0:425 [U] 54.16
M:178 [LYS] 0:416 [G] 2.9 0:424 [C] 54.16
M:178 [LYS] 0:417 [G] 2.96 sugar:SC 54.16
M:179 [GLY] 0:394 [G] 3.6 72.55
M:179 [GLY] 0:398 [U] 2.9 0:391 [U] sugar:BB 72.55
M:179 [GLY] 0:399 [C] 3.2 0:390 [G] 72.55
M:180 [SER] 0:398 [U] 4.8 0:391 [U] 63.78
M:180 [SER] 0:399 [C] 4.77 0:390 [G] 63.78
M:181 [GLU] 0:226 [A] 4.11 0:214 [U] 80.69
M:181 [GLU] 0:227 [A] 3.6 0:212 [A] 80.69
M:181 [GLU] 0:393 [G] 3.29 80.69
M:181 [GLU] 0:394 [G] 2.66 base:SC, base:SC 80.69
M:181 [GLU] 0:398 [U] 4.16 0:391 [U] 80.69
M:181 [GLU] 0:417 [G] 4.82 80.69
M:182 [LYS] 0:226 [A] 3.51 0:214 [U] sugar:SC 80.82
M:182 [LYS] 0:392 [U] 2.88 80.82
M:182 [LYS] 0:393 [G] 2.92 base:SC 80.82
M:182 [LYS] 0:394 [G] 3.38 80.82
M:183 [THR] 0:399 [C] 3.98 0:390 [G] 26.74
M:184 [ARG] 0:189 [A] 3.1 85.96
M:184 [ARG] 0:190 [G] 3.12 0:435 [A] 85.96
M:184 [ARG] 0:205 [U] 3.49 0:437 [A] 85.96
M:184 [ARG] 0:206 [G] 3.45 0:233 [U] 85.96
M:185 [PRO] 0:188 [C] 2.59 sugar:BB 80.26
M:185 [PRO] 0:189 [A] 3.15 sugar:BB 80.26
M:185 [PRO] 0:206 [G] 3.77 0:233 [U] 80.26
M:185 [PRO] 0:207 [U] 3.94 0:232 [A] 80.26
M:186 [SER] 0:154 [C] 4.87 0:182 [G] 88.91
M:186 [SER] 0:155 [C] 2.49 0:181 [G] 88.91
M:186 [SER] 0:156 [C] 3.79 0:180 [G] 88.91
M:186 [SER] 0:188 [C] 3.41 88.91
M:187 [LEU] 0:155 [C] 4.62 0:181 [G] 9.1
M:187 [LEU] 0:156 [C] 3.08 0:180 [G] 9.1
M:187 [LEU] 0:157 [G] 3.31 0:179 [C] 9.1
M:188 [ARG] 0:153 [C] 4.83 0:184 [G] 56.67
M:188 [ARG] 0:154 [C] 2.79 0:182 [G] 56.67
M:188 [ARG] 0:155 [C] 2.4 0:181 [G] 56.67
M:188 [ARG] 0:156 [C] 2.98 0:180 [G] 56.67
M:189 [SER] 0:155 [C] 3.33 0:181 [G] 78.38
M:189 [SER] 0:207 [U] 4.68 0:232 [A] 78.38
M:191 [GLY] 0:175 [G] 3.09 0.23
M:191 [GLY] 0:176 [U] 3.93 0:160 [A] 0.23
M:192 [GLY] 0:175 [G] 3.45 45.69
M:192 [GLY] 0:176 [U] 4.99 0:160 [A] 45.69
M:193 [LYS] 0:175 [G] 3.83 29.58
M:193 [LYS] 0:225 [G] 4.08 0:215 [A] 29.58
M:193 [LYS] 0:391 [U] 3.11 0:398 [U] 29.58
M:193 [LYS] 0:392 [U] 3.2 sugar:BB 29.58
M:193 [LYS] 0:393 [G] 4.26 29.58
M:194 [GLY] 0:390 [G] 4.7 0:399 [C] 25.21
M:194 [GLY] 0:391 [U] 4.22 0:398 [U] 25.21
M:194 [GLY] 0:399 [C] 3.92 0:390 [G] 25.21

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group106 1YHQ_M_0 M: 50s ribosomal protein l15e, Haloarcula marismortui (natural) 0: 23s ribosomal RNA, Haloarcula marismortui (natural) P60618 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_L_0 1YHQ_M_0 0.97 1.0 0.2 0.71 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA compare
1VQ8_M_0 1YHQ_M_0 0.99 1.0 0.22 0.98 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA compare
1YHQ_M_0 6AZ3_M_2 0.63 0.83 2.28 0.19 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_M_0 6AZ3_M_1,7 0.72 0.72 1.71 0.32 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_M_0 7O7Y_BN_B5,B8 0.71 0.94 2.03 0.36 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_M_0 3CC2_M_0 1.00 1.0 0.12 0.99 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA compare