RNAprotDB

All interfaces > All interologs > Interface groups > group106 > 3CC2_M_0

Interface analysis

mouse controls

Style

Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

View

Focus on

Interface
RNA
Protein
All

Show chains

Interface

show as licorice
show Accessibility
Rim - Core

Contacts -

3CC2_M
3CC2_0
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
M:1 [ALA] 0:243 [A] 3.26 62.32
M:1 [ALA] 0:244 [C] 2.81 0:267 [G] 62.32
M:1 [ALA] 0:376 [C] 2.88 0:274 [G] sugar:BB 62.32
M:1 [ALA] 0:377 [C] 3.96 0:273 [G] 62.32
M:2 [ARG] 0:376 [C] 4.38 0:274 [G] 74.6
M:2 [ARG] 0:377 [C] 3.64 0:273 [G] 74.6
M:3 [SER] 0:242 [A] 3.33 0:269 [G] 62.54
M:3 [SER] 0:243 [A] 3.09 62.54
M:5 [TYR] 0:242 [A] 3.57 0:269 [G] 53.23
M:5 [TYR] 0:243 [A] 4.77 53.23
M:5 [TYR] 0:264 [G] 2.68 0:247 [A] 53.23
M:6 [SER] 0:378 [A] 4.72 0:271 [C] 57.86
M:9 [ARG] 0:377 [C] 4.87 0:273 [G] 43.09
M:9 [ARG] 0:378 [A] 2.45 0:271 [C] 43.09
M:9 [ARG] 0:379 [G] 3.94 0:240 [C] 43.09
M:9 [ARG] 0:380 [A] 3.04 0:408 [A] 43.09
M:12 [TRP] 0:380 [A] 3.79 0:408 [A] 39.94
M:13 [LYS] 0:380 [A] 3.56 0:408 [A] 54.38
M:13 [LYS] 0:381 [G] 3.52 54.38
M:13 [LYS] 0:409 [U] 2.67 base:SC 54.38
M:14 [ASN] 0:381 [G] 4.17 24.69
M:14 [ASN] 0:407 [A] 3.5 0:382 [U] 24.69
M:15 [PRO] 0:381 [G] 3.39 46.27
M:16 [GLY] 0:381 [G] 4.73 0.23
M:25 [TRP] 0:2133 [U] 3.76 0:2260 [A] 58.75
M:25 [TRP] 0:2243 [C] 3.74 58.75
M:25 [TRP] 0:2244 [A] 3.44 0:2257 [G] sugar:SC 58.75
M:28 [GLN] 0:2245 [C] 4.89 0:2256 [G] 64.41
M:29 [GLN] 0:2244 [A] 3.53 0:2257 [G] 57.75
M:29 [GLN] 0:2245 [C] 3.78 0:2256 [G] 57.75
M:32 [ARG] 0:2132 [C] 4.72 0:2261 [C] 96.57
M:32 [ARG] 0:2133 [U] 4.96 0:2260 [A] 96.57
M:32 [ARG] 0:2244 [A] 3.07 0:2257 [G] 96.57
M:32 [ARG] 0:2245 [C] 2.69 0:2256 [G] 96.57
M:35 [GLY] 0:1467 [C] 3.3 0:1475 [G] 44.19
M:36 [ALA] 0:1467 [C] 2.73 0:1475 [G] 64.88
M:36 [ALA] 0:1468 [G] 3.64 0:1474 [C] 64.88
M:37 [VAL] 0:1467 [C] 4.54 0:1475 [G] 74.26
M:39 [ARG] 0:134 [U] 4.74 0:144 [A] 81.24
M:39 [ARG] 0:135 [G] 2.53 0:143 [C] 81.24
M:39 [ARG] 0:136 [C] 2.71 0:142 [G] 81.24
M:42 [ARG] 0:261 [A] 2.81 47.27
M:42 [ARG] 0:262 [A] 2.97 47.27
M:42 [ARG] 0:263 [U] 2.91 sugar:SC 47.27
M:45 [ARG] 0:380 [A] 4.04 0:408 [A] 87.83
M:45 [ARG] 0:381 [G] 2.66 87.83
M:46 [LEU] 0:263 [U] 3.4 59.52
M:46 [LEU] 0:264 [G] 3.24 0:247 [A] 59.52
M:47 [ASP] 0:241 [A] 4.56 0:270 [U] 76.07
M:48 [LYS] 0:379 [G] 3.8 0:240 [C] 87.99
M:48 [LYS] 0:380 [A] 2.96 0:408 [A] 87.99
M:48 [LYS] 0:381 [G] 3.55 87.99
M:48 [LYS] 0:430 [A] 4.26 87.99
M:48 [LYS] 0:431 [G] 2.64 0:239 [C] 87.99
M:50 [ARG] 0:241 [A] 3.41 0:270 [U] 90.7
M:50 [ARG] 0:242 [A] 3.02 0:269 [G] 90.7
M:50 [ARG] 0:264 [G] 2.91 0:247 [A] 90.7
M:50 [ARG] 0:265 [U] 2.72 0:248 [A] 90.7
M:51 [SER] 0:240 [C] 4.64 0:379 [G] 54.39
M:51 [SER] 0:241 [A] 3.44 0:270 [U] 54.39
M:51 [SER] 0:379 [G] 2.78 0:240 [C] base:BB, base:SC 54.39
M:51 [SER] 0:431 [G] 3.43 0:239 [C] 54.39
M:52 [GLN] 0:431 [G] 3.18 0:239 [C] 77.43
M:53 [GLY] 0:431 [G] 4.59 0:239 [C] 98.79
M:54 [TYR] 0:264 [G] 4.0 0:247 [A] 90.67
M:55 [LYS] 0:241 [A] 4.76 0:270 [U] 87.08
M:55 [LYS] 0:265 [U] 3.7 0:248 [A] 87.08
M:55 [LYS] 0:266 [G] 3.22 0:245 [C] 87.08
M:56 [ALA] 0:260 [C] 4.52 0:249 [G] 92.5
M:56 [ALA] 0:261 [A] 3.47 92.5
M:56 [ALA] 0:262 [A] 4.54 92.5
M:56 [ALA] 0:264 [G] 3.75 0:247 [A] 92.5
M:56 [ALA] 0:265 [U] 2.88 0:248 [A] 92.5
M:57 [LYS] 0:250 [C] 3.91 0:259 [G] 96.02
M:57 [LYS] 0:260 [C] 4.22 0:249 [G] 96.02
M:57 [LYS] 0:261 [A] 4.88 96.02
M:57 [LYS] 0:265 [U] 4.32 0:248 [A] 96.02
M:57 [LYS] 0:266 [G] 3.54 0:245 [C] 96.02
M:58 [GLN] 0:136 [C] 3.41 0:142 [G] 73.44
M:58 [GLN] 0:137 [U] 3.1 0:140 [G] 73.44
M:58 [GLN] 0:250 [C] 4.16 0:259 [G] 73.44
M:58 [GLN] 0:251 [C] 3.65 0:258 [G] sugar:SC 73.44
M:58 [GLN] 0:259 [G] 2.85 0:250 [C] base:SC 73.44
M:58 [GLN] 0:260 [C] 3.78 0:249 [G] 73.44
M:59 [GLY] 0:135 [G] 4.09 0:143 [C] 98.4
M:59 [GLY] 0:136 [C] 4.17 0:142 [G] 98.4
M:61 [ILE] 0:135 [G] 3.57 0:143 [C] 65.71
M:61 [ILE] 0:136 [C] 4.58 0:142 [G] 65.71
M:66 [SER] 0:1468 [G] 4.42 0:1474 [C] 87.28
M:68 [ARG] 0:1469 [C] 3.23 0:1472 [C] 49.15
M:68 [ARG] 0:1470 [A] 2.97 49.15
M:69 [LYS] 0:402 [U] 4.57 0:387 [G] 78.95
M:69 [LYS] 0:403 [C] 3.25 0:386 [G] 78.95
M:69 [LYS] 0:404 [G] 3.0 0:385 [C] 78.95
M:69 [LYS] 0:2131 [G] 4.35 0:2262 [C] 78.95
M:69 [LYS] 0:2263 [G] 3.66 0:2130 [C] 78.95
M:70 [GLY] 0:402 [U] 3.31 0:387 [G] 96.62
M:70 [GLY] 0:403 [C] 3.04 0:386 [G] 96.62
M:70 [GLY] 0:2263 [G] 3.37 0:2130 [C] 96.62
M:70 [GLY] 0:2264 [A] 3.88 0:2129 [U] 96.62
M:71 [SER] 0:402 [U] 3.88 0:387 [G] 68.24
M:71 [SER] 0:1470 [A] 4.94 68.24
M:71 [SER] 0:2263 [G] 4.05 0:2130 [C] 68.24
M:71 [SER] 0:2264 [A] 2.57 0:2129 [U] 68.24
M:72 [ALA] 0:1470 [A] 3.75 72.85
M:73 [ARG] 0:1469 [C] 3.83 0:1472 [C] 44.69
M:73 [ARG] 0:1470 [A] 2.95 44.69
M:73 [ARG] 0:1864 [C] 3.28 44.69
M:73 [ARG] 0:1865 [A] 3.99 44.69
M:73 [ARG] 0:2263 [G] 3.28 0:2130 [C] 44.69
M:74 [LYS] 0:158 [A] 4.98 0:178 [U] 73.03
M:74 [LYS] 0:159 [G] 3.29 0:177 [A] 73.03
M:74 [LYS] 0:1864 [C] 3.42 73.03
M:75 [ARG] 0:1863 [G] 3.64 0:1866 [A] 38.53
M:75 [ARG] 0:1864 [C] 2.7 base/AA stacks 38.53
M:76 [ARG] 0:1864 [C] 4.99 63.32
M:76 [ARG] 0:2121 [G] 3.85 0:2273 [C] 63.32
M:76 [ARG] 0:2122 [C] 2.92 0:2272 [G] base:SC, sugar:SC 63.32
M:76 [ARG] 0:2123 [A] 3.54 0:2270 [G] sugar:SC 63.32
M:76 [ARG] 0:2272 [G] 3.7 0:2122 [C] 63.32
M:76 [ARG] 0:2273 [C] 2.77 0:2121 [G] base:SC, sugar:SC 63.32
M:76 [ARG] 0:2274 [A] 4.26 0:2120 [U] 63.32
M:77 [HIS] 0:2122 [C] 4.25 0:2272 [G] 63.25
M:77 [HIS] 0:2273 [C] 4.38 0:2121 [G] 63.25
M:77 [HIS] 0:2274 [A] 3.18 0:2120 [U] sugar:SC 63.25
M:78 [LYS] 0:869 [G] 3.5 3.68
M:78 [LYS] 0:870 [G] 3.51 0:880 [C] 3.68
M:79 [ALA] 0:770 [C] 3.65 0:891 [G] 47.98
M:79 [ALA] 0:771 [G] 3.51 0:890 [C] 47.98
M:79 [ALA] 0:2274 [A] 4.07 0:2120 [U] 47.98
M:80 [GLY] 0:160 [A] 4.37 0:176 [U] 82.12
M:80 [GLY] 0:161 [A] 3.65 0:174 [A] 82.12
M:80 [GLY] 0:769 [C] 4.59 0:892 [G] 82.12
M:80 [GLY] 0:770 [C] 2.64 0:891 [G] 82.12
M:80 [GLY] 0:2274 [A] 3.37 0:2120 [U] 82.12
M:80 [GLY] 0:2275 [G] 3.48 0:2119 [C] 82.12
M:81 [ARG] 0:160 [A] 3.11 0:176 [U] 92.42
M:81 [ARG] 0:161 [A] 3.33 0:174 [A] 92.42
M:81 [ARG] 0:770 [C] 2.97 0:891 [G] 92.42
M:81 [ARG] 0:771 [G] 2.94 0:890 [C] 92.42
M:81 [ARG] 0:2274 [A] 2.67 0:2120 [U] sugar:BB, sugar:BB 92.42
M:81 [ARG] 0:2275 [G] 3.23 0:2119 [C] 92.42
M:82 [ARG] 0:161 [A] 2.92 0:174 [A] 86.67
M:82 [ARG] 0:169 [A] 4.87 86.67
M:82 [ARG] 0:170 [U] 2.96 0:221 [G] 86.67
M:82 [ARG] 0:171 [C] 2.72 0:164 [G] 86.67
M:82 [ARG] 0:172 [U] 3.26 0:163 [U] 86.67
M:82 [ARG] 0:173 [C] 3.93 0:162 [C] 86.67
M:82 [ARG] 0:2274 [A] 4.83 0:2120 [U] 86.67
M:82 [ARG] 0:2275 [G] 4.37 0:2119 [C] 86.67
M:83 [SER] 0:169 [A] 3.75 68.66
M:83 [SER] 0:170 [U] 2.56 0:221 [G] 68.66
M:83 [SER] 0:2121 [G] 3.47 0:2273 [C] 68.66
M:83 [SER] 0:2122 [C] 4.51 0:2272 [G] 68.66
M:84 [LYS] 0:170 [U] 3.01 0:221 [G] 65.15
M:84 [LYS] 0:171 [C] 3.24 0:164 [G] 65.15
M:84 [LYS] 0:390 [G] 3.47 0:399 [C] 65.15
M:84 [LYS] 0:391 [U] 2.68 0:398 [U] 65.15
M:85 [ARG] 0:160 [A] 3.38 0:176 [U] 67.37
M:85 [ARG] 0:161 [A] 4.02 0:174 [A] 67.37
M:85 [ARG] 0:174 [A] 3.64 0:161 [A] 67.37
M:85 [ARG] 0:175 [G] 4.33 67.37
M:85 [ARG] 0:390 [G] 4.19 0:399 [C] 67.37
M:85 [ARG] 0:391 [U] 2.67 0:398 [U] 67.37
M:86 [GLN] 0:2121 [G] 2.87 0:2273 [C] base:SC 47.85
M:86 [GLN] 0:2122 [C] 2.94 0:2272 [G] sugar:BB 47.85
M:86 [GLN] 0:2123 [A] 4.72 0:2270 [G] 47.85
M:86 [GLN] 0:2273 [C] 4.81 0:2121 [G] 47.85
M:86 [GLN] 0:2274 [A] 2.99 0:2120 [U] base:SC 47.85
M:86 [GLN] 0:2275 [G] 4.0 0:2119 [C] sugar:SC 47.85
M:87 [GLY] 0:2122 [C] 3.67 0:2272 [G] 66.16
M:87 [GLY] 0:2123 [A] 3.88 0:2270 [G] 66.16
M:88 [VAL] 0:2122 [C] 3.91 0:2272 [G] 50.35
M:88 [VAL] 0:2123 [A] 2.9 0:2270 [G] 50.35
M:89 [THR] 0:2123 [A] 2.78 0:2270 [G] 31.66
M:89 [THR] 0:2124 [G] 4.04 0:2269 [C] 31.66
M:89 [THR] 0:2264 [A] 5.0 0:2129 [U] 31.66
M:89 [THR] 0:2265 [U] 4.49 0:2128 [G] 31.66
M:90 [ARG] 0:388 [G] 3.37 0:401 [C] 43.74
M:90 [ARG] 0:389 [G] 2.9 0:400 [C] 43.74
M:90 [ARG] 0:2123 [A] 4.5 0:2270 [G] 43.74
M:90 [ARG] 0:2265 [U] 4.33 0:2128 [G] 43.74
M:90 [ARG] 0:2266 [A] 2.54 0:2127 [U] 43.74
M:91 [ILE] 0:159 [G] 4.25 0:177 [A] 49.32
M:91 [ILE] 0:389 [G] 4.28 0:400 [C] 49.32
M:92 [THR] 0:158 [A] 4.92 0:178 [U] 75.44
M:92 [THR] 0:388 [G] 3.59 0:401 [C] 75.44
M:92 [THR] 0:389 [G] 4.05 0:400 [C] 75.44
M:92 [THR] 0:401 [C] 2.73 0:388 [G] base:SC 75.44
M:92 [THR] 0:402 [U] 3.59 0:387 [G] 75.44
M:93 [ARG] 0:158 [A] 3.11 0:178 [U] 54.71
M:93 [ARG] 0:159 [G] 3.74 0:177 [A] 54.71
M:93 [ARG] 0:401 [C] 2.82 0:388 [G] sugar:BB 54.71
M:93 [ARG] 0:1469 [C] 4.14 0:1472 [C] 54.71
M:93 [ARG] 0:1470 [A] 2.6 54.71
M:94 [ARG] 0:157 [G] 4.34 0:179 [C] 32.68
M:94 [ARG] 0:158 [A] 2.75 0:178 [U] 32.68
M:94 [ARG] 0:159 [G] 4.95 0:177 [A] 32.68
M:94 [ARG] 0:175 [G] 2.92 base:SC, base:SC 32.68
M:94 [ARG] 0:390 [G] 3.57 0:399 [C] sugar:SC 32.68
M:94 [ARG] 0:391 [U] 3.49 0:398 [U] 32.68
M:94 [ARG] 0:400 [C] 3.35 0:389 [G] sugar:BB 32.68
M:94 [ARG] 0:401 [C] 3.59 0:388 [G] 32.68
M:95 [LYS] 0:156 [C] 4.31 0:180 [G] 73.37
M:95 [LYS] 0:157 [G] 3.42 0:179 [C] 73.37
M:95 [LYS] 0:158 [A] 4.43 0:178 [U] 73.37
M:95 [LYS] 0:401 [C] 4.08 0:388 [G] 73.37
M:95 [LYS] 0:402 [U] 4.75 0:387 [G] 73.37
M:95 [LYS] 0:1470 [A] 3.05 sugar:SC 73.37
M:96 [ASP] 0:401 [C] 3.43 0:388 [G] 81.64
M:96 [ASP] 0:402 [U] 3.32 0:387 [G] 81.64
M:97 [ILE] 0:401 [C] 4.39 0:388 [G] 49.24
M:97 [ILE] 0:402 [U] 2.81 0:387 [G] 49.24
M:97 [ILE] 0:403 [C] 3.94 0:386 [G] 49.24
M:99 [ARG] 0:156 [C] 2.99 0:180 [G] sugar:SC 0.0
M:99 [ARG] 0:157 [G] 2.76 0:179 [C] 0.0
M:100 [VAL] 0:1470 [A] 3.66 83.01
M:100 [VAL] 0:1471 [A] 3.4 83.01
M:103 [GLU] 0:156 [C] 4.61 0:180 [G] 64.59
M:103 [GLU] 0:1470 [A] 4.51 64.59
M:103 [GLU] 0:1471 [A] 4.31 64.59
M:104 [ARG] 0:1468 [G] 4.31 0:1474 [C] 93.23
M:104 [ARG] 0:1469 [C] 3.04 0:1472 [C] base/AA stacks 93.23
M:104 [ARG] 0:1470 [A] 4.46 93.23
M:104 [ARG] 0:1471 [A] 2.84 93.23
M:107 [ARG] 0:133 [U] 4.44 0:145 [A] 68.18
M:107 [ARG] 0:181 [G] 3.45 0:155 [C] sugar:SC 68.18
M:107 [ARG] 0:1471 [A] 3.18 68.18
M:107 [ARG] 0:1472 [C] 3.27 0:1469 [C] 68.18
M:108 [THR] 0:133 [U] 2.7 0:145 [A] sugar:BB 71.07
M:108 [THR] 0:134 [U] 3.59 0:144 [A] 71.07
M:109 [PHE] 0:133 [U] 4.75 0:145 [A] 53.08
M:109 [PHE] 0:134 [U] 3.25 0:144 [A] 53.08
M:109 [PHE] 0:135 [G] 3.76 0:143 [C] 53.08
M:110 [PRO] 0:133 [U] 3.1 0:145 [A] 53.33
M:110 [PRO] 0:134 [U] 4.26 0:144 [A] 53.33
M:110 [PRO] 0:145 [A] 4.75 0:133 [U] 53.33
M:110 [PRO] 0:146 [U] 4.04 0:132 [A] 53.33
M:111 [ASN] 0:134 [U] 2.58 0:144 [A] sugar:SC 98.9
M:111 [ASN] 0:135 [G] 3.3 0:143 [C] sugar:SC 98.9
M:111 [ASN] 0:144 [A] 4.93 0:134 [U] 98.9
M:111 [ASN] 0:145 [A] 3.26 0:133 [U] 98.9
M:111 [ASN] 0:146 [U] 4.44 0:132 [A] 98.9
M:112 [LEU] 0:134 [U] 4.1 0:144 [A] 64.86
M:112 [LEU] 0:135 [G] 3.77 0:143 [C] 64.86
M:115 [LEU] 0:432 [G] 4.84 0:238 [C] 86.12
M:116 [ASN] 0:431 [G] 3.13 0:239 [C] 83.96
M:116 [ASN] 0:432 [G] 3.55 0:238 [C] 83.96
M:118 [TYR] 0:381 [G] 4.9 98.74
M:119 [SER] 0:381 [G] 4.38 0.0
M:122 [GLN] 0:404 [G] 3.22 0:385 [C] 60.48
M:122 [GLN] 0:2131 [G] 4.87 0:2262 [C] 60.48
M:123 [ASP] 0:2132 [C] 3.71 0:2261 [C] 98.9
M:124 [GLY] 0:2131 [G] 2.91 0:2262 [C] base:BB 92.47
M:124 [GLY] 0:2132 [C] 3.17 0:2261 [C] sugar:BB 92.47
M:124 [GLY] 0:2262 [C] 3.97 0:2131 [G] 92.47
M:124 [GLY] 0:2263 [G] 3.97 0:2130 [C] 92.47
M:125 [ARG] 0:2131 [G] 4.59 0:2262 [C] 41.24
M:125 [ARG] 0:2246 [U] 4.49 0:2255 [A] 41.24
M:125 [ARG] 0:2262 [C] 3.4 0:2131 [G] 41.24
M:125 [ARG] 0:2263 [G] 4.75 0:2130 [C] 41.24
M:127 [LYS] 0:402 [U] 4.8 0:387 [G] 49.58
M:127 [LYS] 0:403 [C] 2.79 0:386 [G] 49.58
M:135 [ASP] 0:135 [G] 2.64 0:143 [C] sugar:SC 92.08
M:135 [ASP] 0:136 [C] 4.87 0:142 [G] 92.08
M:137 [ASN] 0:144 [A] 4.01 0:134 [U] 36.02
M:137 [ASN] 0:145 [A] 3.36 0:133 [U] sugar:SC 36.02
M:138 [HIS] 0:135 [G] 4.54 0:143 [C] 70.01
M:138 [HIS] 0:136 [C] 3.08 0:142 [G] sugar:SC 70.01
M:138 [HIS] 0:251 [C] 3.73 0:258 [G] 70.01
M:139 [PRO] 0:251 [C] 3.4 0:258 [G] 86.18
M:139 [PRO] 0:252 [C] 3.7 0:257 [G] 86.18
M:140 [ALA] 0:250 [C] 4.31 0:259 [G] 28.45
M:140 [ALA] 0:251 [C] 3.77 0:258 [G] 28.45
M:143 [ASN] 0:250 [C] 4.79 0:259 [G] 52.11
M:143 [ASN] 0:251 [C] 3.42 0:258 [G] 52.11
M:144 [ASP] 0:266 [G] 3.71 0:245 [C] 85.19
M:145 [ASP] 0:239 [C] 4.75 0:431 [G] 38.77
M:145 [ASP] 0:288 [A] 4.5 0:364 [U] 38.77
M:146 [ASP] 0:239 [C] 3.31 0:431 [G] sugar:SC 17.46
M:146 [ASP] 0:240 [C] 3.38 0:379 [G] 17.46
M:146 [ASP] 0:241 [A] 4.76 0:270 [U] 17.46
M:149 [TRP] 0:432 [G] 3.33 0:238 [C] 41.8
M:149 [TRP] 0:433 [C] 3.3 0:237 [G] 41.8
M:153 [ASP] 0:183 [A] 3.91 9.03
M:153 [ASP] 0:184 [G] 4.15 0:153 [C] 9.03
M:153 [ASP] 0:185 [G] 4.79 0:152 [A] 9.03
M:154 [ASP] 0:183 [A] 3.89 21.61
M:154 [ASP] 0:184 [G] 4.37 0:153 [C] 21.61
M:154 [ASP] 0:187 [A] 4.35 21.61
M:154 [ASP] 0:188 [C] 3.67 21.61
M:154 [ASP] 0:434 [U] 4.22 0:191 [A] 21.61
M:155 [GLN] 0:433 [C] 4.0 0:237 [G] 65.54
M:155 [GLN] 0:434 [U] 3.19 0:191 [A] 65.54
M:156 [ALA] 0:182 [G] 4.36 0:154 [C] 47.82
M:156 [ALA] 0:183 [A] 3.62 47.82
M:157 [ASP] 0:182 [G] 2.61 0:154 [C] 57.39
M:157 [ASP] 0:183 [A] 3.12 57.39
M:158 [ARG] 0:432 [G] 4.41 0:238 [C] 96.47
M:158 [ARG] 0:433 [C] 2.91 0:237 [G] 96.47
M:160 [PHE] 0:155 [C] 4.62 0:181 [G] 23.41
M:160 [PHE] 0:156 [C] 3.53 0:180 [G] 23.41
M:160 [PHE] 0:181 [G] 3.2 0:155 [C] base:BB 23.41
M:160 [PHE] 0:182 [G] 4.25 0:154 [C] 23.41
M:161 [ARG] 0:155 [C] 2.75 0:181 [G] sugar:BB 96.36
M:161 [ARG] 0:156 [C] 3.44 0:180 [G] 96.36
M:161 [ARG] 0:181 [G] 4.22 0:155 [C] 96.36
M:161 [ARG] 0:182 [G] 3.78 0:154 [C] sugar:SC 96.36
M:161 [ARG] 0:183 [A] 3.3 base/AA stacks 96.36
M:161 [ARG] 0:187 [A] 3.7 96.36
M:161 [ARG] 0:188 [C] 3.03 96.36
M:162 [GLY] 0:155 [C] 4.9 0:181 [G] 88.64
M:162 [GLY] 0:156 [C] 3.96 0:180 [G] 88.64
M:162 [GLY] 0:189 [A] 4.71 88.64
M:163 [LEU] 0:155 [C] 4.7 0:181 [G] 57.87
M:163 [LEU] 0:188 [C] 3.49 57.87
M:163 [LEU] 0:189 [A] 3.92 57.87
M:163 [LEU] 0:433 [C] 4.32 0:237 [G] 57.87
M:164 [THR] 0:432 [G] 4.6 0:238 [C] 91.4
M:165 [GLY] 0:432 [G] 3.15 0:238 [C] 79.51
M:168 [ARG] 0:189 [A] 2.79 67.57
M:168 [ARG] 0:190 [G] 4.52 0:435 [A] 67.57
M:168 [ARG] 0:432 [G] 4.47 0:238 [C] 67.57
M:168 [ARG] 0:433 [C] 3.05 0:237 [G] 67.57
M:169 [ARG] 0:400 [C] 3.55 0:389 [G] 71.47
M:169 [ARG] 0:430 [A] 4.42 71.47
M:169 [ARG] 0:431 [G] 4.18 0:239 [C] 71.47
M:170 [ASN] 0:157 [G] 3.51 0:179 [C] 64.47
M:170 [ASN] 0:400 [C] 2.96 0:389 [G] 64.47
M:170 [ASN] 0:401 [C] 3.03 0:388 [G] 64.47
M:171 [ARG] 0:155 [C] 3.24 0:181 [G] 89.19
M:171 [ARG] 0:156 [C] 2.65 0:180 [G] 89.19
M:171 [ARG] 0:157 [G] 3.9 0:179 [C] 89.19
M:171 [ARG] 0:188 [C] 3.33 sugar:SC 89.19
M:171 [ARG] 0:189 [A] 2.49 89.19
M:171 [ARG] 0:399 [C] 4.74 0:390 [G] 89.19
M:171 [ARG] 0:400 [C] 4.79 0:389 [G] 89.19
M:172 [GLY] 0:399 [C] 3.56 0:390 [G] 72.37
M:172 [GLY] 0:400 [C] 3.81 0:389 [G] 72.37
M:173 [LEU] 0:189 [A] 3.85 77.59
M:173 [LEU] 0:190 [G] 3.6 0:435 [A] 77.59
M:174 [SER] 0:193 [A] 3.78 48.72
M:174 [SER] 0:400 [C] 4.78 0:389 [G] 48.72
M:176 [LYS] 0:190 [G] 3.64 0:435 [A] 77.37
M:176 [LYS] 0:191 [A] 3.16 0:434 [U] 77.37
M:176 [LYS] 0:192 [A] 3.28 0:203 [G] base:SC 77.37
M:176 [LYS] 0:193 [A] 3.76 77.37
M:176 [LYS] 0:194 [A] 3.55 0:202 [U] 77.37
M:176 [LYS] 0:204 [A] 2.8 0:436 [A] sugar:SC 77.37
M:176 [LYS] 0:205 [U] 4.28 0:437 [A] 77.37
M:177 [GLY] 0:194 [A] 3.32 0:202 [U] 71.93
M:177 [GLY] 0:195 [C] 3.62 0:201 [G] 71.93
M:178 [LYS] 0:194 [A] 4.18 0:202 [U] 58.0
M:178 [LYS] 0:195 [C] 2.85 0:201 [G] 58.0
M:178 [LYS] 0:394 [G] 3.59 58.0
M:178 [LYS] 0:397 [A] 4.72 58.0
M:178 [LYS] 0:398 [U] 4.59 0:391 [U] 58.0
M:178 [LYS] 0:399 [C] 3.79 0:390 [G] 58.0
M:178 [LYS] 0:415 [A] 4.95 0:425 [U] 58.0
M:178 [LYS] 0:416 [G] 2.77 0:424 [C] 58.0
M:178 [LYS] 0:417 [G] 3.02 sugar:SC 58.0
M:179 [GLY] 0:394 [G] 3.62 74.06
M:179 [GLY] 0:398 [U] 2.91 0:391 [U] sugar:BB 74.06
M:179 [GLY] 0:399 [C] 3.11 0:390 [G] 74.06
M:180 [SER] 0:398 [U] 4.75 0:391 [U] 65.11
M:180 [SER] 0:399 [C] 4.76 0:390 [G] 65.11
M:181 [GLU] 0:226 [A] 4.05 0:214 [U] 80.99
M:181 [GLU] 0:227 [A] 3.54 0:212 [A] 80.99
M:181 [GLU] 0:393 [G] 3.37 80.99
M:181 [GLU] 0:394 [G] 2.66 base:SC, base:SC 80.99
M:181 [GLU] 0:398 [U] 4.18 0:391 [U] 80.99
M:181 [GLU] 0:417 [G] 4.89 80.99
M:182 [LYS] 0:226 [A] 3.47 0:214 [U] sugar:SC 79.08
M:182 [LYS] 0:392 [U] 2.93 79.08
M:182 [LYS] 0:393 [G] 2.85 base:SC 79.08
M:182 [LYS] 0:394 [G] 3.28 base:SC 79.08
M:183 [THR] 0:399 [C] 3.95 0:390 [G] 31.09
M:184 [ARG] 0:189 [A] 3.17 86.71
M:184 [ARG] 0:190 [G] 3.15 0:435 [A] 86.71
M:184 [ARG] 0:205 [U] 3.56 0:437 [A] 86.71
M:184 [ARG] 0:206 [G] 3.48 0:233 [U] 86.71
M:185 [PRO] 0:188 [C] 2.66 sugar:BB 76.44
M:185 [PRO] 0:189 [A] 3.17 sugar:BB 76.44
M:185 [PRO] 0:206 [G] 3.78 0:233 [U] 76.44
M:185 [PRO] 0:207 [U] 3.89 0:232 [A] 76.44
M:186 [SER] 0:154 [C] 4.9 0:182 [G] 88.01
M:186 [SER] 0:155 [C] 2.57 0:181 [G] 88.01
M:186 [SER] 0:156 [C] 3.85 0:180 [G] 88.01
M:186 [SER] 0:188 [C] 3.43 88.01
M:187 [LEU] 0:155 [C] 4.69 0:181 [G] 28.97
M:187 [LEU] 0:156 [C] 3.16 0:180 [G] 28.97
M:187 [LEU] 0:157 [G] 3.47 0:179 [C] 28.97
M:188 [ARG] 0:153 [C] 4.81 0:184 [G] 51.92
M:188 [ARG] 0:154 [C] 2.86 0:182 [G] base/AA stacks 51.92
M:188 [ARG] 0:155 [C] 2.53 0:181 [G] 51.92
M:188 [ARG] 0:156 [C] 2.93 0:180 [G] 51.92
M:189 [SER] 0:155 [C] 3.42 0:181 [G] 81.81
M:189 [SER] 0:207 [U] 4.85 0:232 [A] 81.81
M:191 [GLY] 0:175 [G] 3.0 0.55
M:191 [GLY] 0:176 [U] 3.79 0:160 [A] 0.55
M:192 [GLY] 0:175 [G] 3.35 51.27
M:193 [LYS] 0:175 [G] 3.77 41.48
M:193 [LYS] 0:225 [G] 4.26 0:215 [A] 41.48
M:193 [LYS] 0:391 [U] 3.11 0:398 [U] 41.48
M:193 [LYS] 0:392 [U] 3.35 41.48
M:193 [LYS] 0:393 [G] 4.22 41.48
M:194 [GLY] 0:390 [G] 4.68 0:399 [C] 26.02
M:194 [GLY] 0:391 [U] 3.98 0:398 [U] 26.02
M:194 [GLY] 0:399 [C] 3.91 0:390 [G] 26.02

logo_download Export the table of contacts

*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group106 3CC2_M_0 M: 50s ribosomal protein l15e, Haloarcula marismortui (natural) 0: 23s ribosomal RNA, Haloarcula marismortui (natural) P60618 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_L_0 3CC2_M_0 0.97 1.0 0.17 0.72 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA compare
1VQ8_M_0 3CC2_M_0 0.99 1.0 0.27 0.98 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA compare
1YHQ_M_0 3CC2_M_0 1.00 1.0 0.12 0.99 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA compare
3CC2_M_0 6AZ3_M_1,7 0.72 0.72 1.84 0.34 Ribosomal proteins S24e, L23 and L15e compare
3CC2_M_0 6AZ3_M_2 0.63 0.83 2.3 0.19 Ribosomal proteins S24e, L23 and L15e compare
3CC2_M_0 7O7Y_BN_B5,B8 0.70 0.94 2.07 0.36 Ribosomal proteins S24e, L23 and L15e compare