Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
ChainChain (with hetatm)
Chainbow
Hydrophobicity Electrostatics (surface only) Conservation*
View
Focus on
InterfaceRNA
Protein
All
Show chains
Interface
show as licoriceshow Accessibility
Rim - Core
Contacts -
6AZ3_M
|
6AZ3_1,7
|
Distance
|
Base Pair
|
Hbond nuc:res
|
Base Stacking
|
Residue conservation
|
---|---|---|---|---|---|---|
M:2 [GLY] | 1:116 [U] | 3.25 | 1:152 [A] | 60.6 | ||
M:2 [GLY] | 1:117 [G] | 3.5 | 1:151 [C] | 60.6 | ||
M:3 [ALA] | 1:116 [U] | 3.89 | 1:152 [A] | 17.6 | ||
M:4 [PHE] | 1:114 [G] | 4.38 | 38.1 | |||
M:4 [PHE] | 1:115 [U] | 3.41 | 1:153 [C] | 38.1 | ||
M:4 [PHE] | 1:116 [U] | 3.47 | 1:152 [A] | 38.1 | ||
M:5 [MET] | 1:115 [U] | 4.3 | 1:153 [C] | 45.0 | ||
M:5 [MET] | 1:116 [U] | 3.33 | 1:152 [A] | 45.0 | ||
M:5 [MET] | 1:302 [G] | 3.76 | 45.0 | |||
M:5 [MET] | 1:303 [C] | 4.64 | 45.0 | |||
M:8 [ASN] | 1:304 [G] | 4.61 | 1:113 [C] | 30.0 | ||
M:8 [ASN] | 1:305 [A] | 3.09 | 1:333 [A] | 30.0 | ||
M:9 [GLU] | 1:334 [G] | 4.1 | 40.3 | |||
M:11 [TRP] | 1:305 [A] | 3.03 | 1:333 [A] | 33.4 | ||
M:12 [LYS] | 1:305 [A] | 3.4 | 1:333 [A] | 56.5 | ||
M:12 [LYS] | 1:332 [A] | 4.95 | 1:307 [U] | 56.5 | ||
M:12 [LYS] | 1:334 [G] | 2.81 | base:SC | 56.5 | ||
M:14 [LYS] | 1:305 [A] | 3.15 | 1:333 [A] | sugar:SC | 61.1 | |
M:14 [LYS] | 1:306 [G] | 3.64 | 61.1 | |||
M:15 [SER] | 1:306 [G] | 3.44 | 10.4 | |||
M:15 [SER] | 1:332 [A] | 4.45 | 1:307 [U] | 10.4 | ||
M:32 [HIS] | 1:1668 [G] | 4.39 | 52.3 | |||
M:33 [GLN] | 1:1651 [G] | 4.49 | 1:1658 [C] | 45.9 | ||
M:34 [HIS] | 1:1650 [C] | 3.66 | 1:1659 [G] | 29.8 | ||
M:34 [HIS] | 1:1651 [G] | 3.44 | 1:1658 [C] | 29.8 | ||
M:34 [HIS] | 1:1668 [G] | 4.07 | 29.8 | |||
M:34 [HIS] | 1:1669 [G] | 3.1 | 29.8 | |||
M:35 [THR] | 1:1651 [G] | 3.25 | 1:1658 [C] | 44.6 | ||
M:35 [THR] | 1:1652 [U] | 2.92 | 1:1656 [A] | 44.6 | ||
M:38 [ARG] | 1:9 [G] | 3.35 | 7:1943 [C] | 77.8 | ||
M:38 [ARG] | 7:1935 [C] | 3.15 | 1:15 [G] | 77.8 | ||
M:38 [ARG] | 7:1936 [A] | 2.96 | 1:14 [U] | 77.8 | ||
M:39 [LEU] | 1:9 [G] | 4.76 | 7:1943 [C] | 60.6 | ||
M:40 [ARG] | 1:6 [C] | 4.77 | 7:1947 [G] | 60.0 | ||
M:40 [ARG] | 1:7 [C] | 2.52 | 7:1945 [G] | 60.0 | ||
M:40 [ARG] | 1:8 [U] | 3.24 | 7:1944 [A2M] | 60.0 | ||
M:40 [ARG] | 1:144 [G] | 2.95 | 1:141 [U] | 60.0 | ||
M:41 [ARG] | 1:7 [C] | 3.98 | 7:1945 [G] | 39.1 | ||
M:41 [ARG] | 1:8 [U] | 4.17 | 7:1944 [A2M] | 39.1 | ||
M:41 [ARG] | 1:145 [U] | 4.33 | 39.1 | |||
M:41 [ARG] | 1:146 [U] | 3.24 | base/AA stacks | 39.1 | ||
M:44 [ARG] | 1:305 [A] | 4.15 | 1:333 [A] | 91.4 | ||
M:44 [ARG] | 1:306 [G] | 2.28 | 91.4 | |||
M:45 [PRO] | 1:146 [U] | 4.41 | 61.2 | |||
M:45 [PRO] | 1:147 [G] | 4.14 | 1:121 [A] | 61.2 | ||
M:46 [GLU] | 1:114 [G] | 4.67 | 62.6 | |||
M:46 [GLU] | 1:305 [A] | 4.57 | 1:333 [A] | 62.6 | ||
M:47 [LYS] | 1:304 [G] | 3.73 | 1:113 [C] | 75.9 | ||
M:47 [LYS] | 1:305 [A] | 2.72 | 1:333 [A] | 75.9 | ||
M:47 [LYS] | 1:306 [G] | 3.16 | 75.9 | |||
M:47 [LYS] | 1:357 [A] | 4.3 | 1:112 [U] | 75.9 | ||
M:49 [ARG] | 1:113 [C] | 4.89 | 1:304 [G] | 93.0 | ||
M:49 [ARG] | 1:114 [G] | 3.67 | 93.0 | |||
M:49 [ARG] | 1:115 [U] | 4.74 | 1:153 [C] | 93.0 | ||
M:49 [ARG] | 1:146 [U] | 4.75 | 93.0 | |||
M:49 [ARG] | 1:147 [G] | 2.39 | 1:121 [A] | 93.0 | ||
M:49 [ARG] | 1:148 [U] | 3.32 | 1:122 [A] | 93.0 | ||
M:50 [MET] | 1:113 [C] | 4.54 | 1:304 [G] | 53.3 | ||
M:50 [MET] | 1:114 [G] | 3.48 | 53.3 | |||
M:50 [MET] | 1:304 [G] | 3.15 | 1:113 [C] | base:BB | 53.3 | |
M:50 [MET] | 1:305 [A] | 3.3 | 1:333 [A] | 53.3 | ||
M:50 [MET] | 1:357 [A] | 3.82 | 1:112 [U] | sugar:BB | 53.3 | |
M:51 [LEU] | 1:357 [A] | 3.29 | 1:112 [U] | 81.8 | ||
M:52 [GLY] | 1:357 [A] | 4.75 | 1:112 [U] | 98.6 | ||
M:53 [TYR] | 1:148 [U] | 4.75 | 1:122 [A] | 86.6 | ||
M:54 [LYS] | 1:113 [C] | 2.67 | 1:304 [G] | sugar:SC | 83.6 | |
M:54 [LYS] | 1:114 [G] | 3.82 | 83.6 | |||
M:54 [LYS] | 1:148 [U] | 3.38 | 1:122 [A] | 83.6 | ||
M:54 [LYS] | 1:149 [G] | 3.7 | 1:119 [C] | 83.6 | ||
M:55 [THR] | 1:144 [G] | 3.72 | 1:141 [U] | 92.0 | ||
M:55 [THR] | 1:145 [U] | 4.79 | 92.0 | |||
M:55 [THR] | 1:147 [G] | 3.32 | 1:121 [A] | 92.0 | ||
M:55 [THR] | 1:148 [U] | 2.63 | 1:122 [A] | 92.0 | ||
M:56 [LYS] | 1:123 [U] | 3.94 | 1:143 [A] | 87.4 | ||
M:56 [LYS] | 1:124 [C] | 3.52 | 1:142 [G] | 87.4 | ||
M:56 [LYS] | 1:148 [U] | 3.36 | 1:122 [A] | sugar:SC | 87.4 | |
M:56 [LYS] | 1:149 [G] | 4.45 | 1:119 [C] | 87.4 | ||
M:57 [GLN] | 1:124 [C] | 4.04 | 1:142 [G] | 73.4 | ||
M:57 [GLN] | 1:125 [G] | 3.32 | 1:140 [U] | 73.4 | ||
M:57 [GLN] | 7:1935 [C] | 4.74 | 1:15 [G] | 73.4 | ||
M:57 [GLN] | 7:1936 [A] | 2.92 | 1:14 [U] | sugar:SC | 73.4 | |
M:57 [GLN] | 7:1937 [U] | 4.04 | 1:13 [G] | 73.4 | ||
M:59 [PHE] | 7:1936 [A] | 4.26 | 1:14 [U] | 25.0 | ||
M:60 [CYS] | 7:1935 [C] | 4.33 | 1:15 [G] | 66.6 | ||
M:60 [CYS] | 7:1936 [A] | 4.66 | 1:14 [U] | 66.6 | ||
M:62 [PHE] | 7:1934 [C] | 3.86 | 1:16 [G] | 66.5 | ||
M:62 [PHE] | 7:1935 [C] | 3.19 | 1:15 [G] | 66.5 | ||
M:65 [ARG] | 1:1651 [G] | 3.93 | 1:1658 [C] | 73.4 | ||
M:65 [ARG] | 1:1652 [U] | 3.58 | 1:1656 [A] | 73.4 | ||
M:67 [ARG] | 1:1651 [G] | 4.16 | 1:1658 [C] | 54.7 | ||
M:67 [ARG] | 1:1652 [U] | 2.99 | 1:1656 [A] | 54.7 | ||
M:67 [ARG] | 1:1653 [U] | 3.81 | 54.7 | |||
M:68 [ARG] | 1:327 [G] | 4.71 | 1:312 [C] | 72.3 | ||
M:68 [ARG] | 1:328 [U] | 3.16 | 1:311 [A] | 72.3 | ||
M:68 [ARG] | 1:329 [G] | 2.57 | 1:310 [C] | 72.3 | ||
M:69 [GLY] | 1:327 [G] | 3.41 | 1:312 [C] | 95.9 | ||
M:69 [GLY] | 1:328 [U] | 3.57 | 1:311 [A] | 95.9 | ||
M:70 [GLY] | 1:327 [G] | 3.28 | 1:312 [C] | 47.0 | ||
M:71 [ARG] | 1:30 [C] | 3.4 | 1:50 [A] | 56.5 | ||
M:71 [ARG] | 1:31 [G] | 3.19 | 1:49 [C] | 56.5 | ||
M:71 [ARG] | 1:1654 [A] | 3.5 | base:SC | 56.5 | ||
M:73 [ARG] | 1:31 [G] | 3.49 | 1:49 [C] | 69.3 | ||
M:73 [ARG] | 1:32 [A] | 3.79 | 1:48 [OMU] | 69.3 | ||
M:74 [PRO] | 1:1655 [U] | 4.17 | 39.2 | |||
M:76 [HIS] | 1:960 [A] | 3.19 | 1:970 [U] | 58.7 | ||
M:77 [LYS] | 1:960 [A] | 2.9 | 1:970 [U] | 23.1 | ||
M:79 [ILE] | 1:959 [OMG] | 3.82 | 40.7 | |||
M:79 [ILE] | 1:960 [A] | 3.86 | 1:970 [U] | 40.7 | ||
M:81 [TYR] | 1:33 [A] | 4.56 | 1:46 [A] | 49.2 | ||
M:81 [TYR] | 1:861 [G] | 3.92 | 1:981 [C] | 49.2 | ||
M:81 [TYR] | 1:862 [U] | 4.25 | 1:980 [A] | 49.2 | ||
M:81 [TYR] | 1:959 [OMG] | 3.35 | 49.2 | |||
M:81 [TYR] | 1:960 [A] | 4.79 | 1:970 [U] | 49.2 | ||
M:82 [GLY] | 1:33 [A] | 3.67 | 1:46 [A] | 82.4 | ||
M:83 [LYS] | 1:33 [A] | 3.04 | 1:46 [A] | 80.7 | ||
M:83 [LYS] | 1:34 [C] | 3.2 | 1:45 [U] | 80.7 | ||
M:83 [LYS] | 1:35 [U] | 3.16 | 1:44 [U] | base:SC | 80.7 | |
M:83 [LYS] | 1:36 [U] | 4.44 | 1:43 [A] | 80.7 | ||
M:83 [LYS] | 1:41 [A] | 3.66 | 80.7 | |||
M:83 [LYS] | 1:42 [U] | 3.48 | 1:93 [G] | 80.7 | ||
M:83 [LYS] | 1:43 [A] | 3.53 | 1:36 [U] | 80.7 | ||
M:83 [LYS] | 1:44 [U] | 2.86 | 1:35 [U] | base:SC | 80.7 | |
M:84 [PRO] | 1:41 [A] | 3.71 | 69.6 | |||
M:84 [PRO] | 1:42 [U] | 3.31 | 1:93 [G] | 69.6 | ||
M:85 [LYS] | 1:42 [U] | 3.21 | 1:93 [G] | 61.8 | ||
M:85 [LYS] | 1:43 [A] | 2.93 | 1:36 [U] | 61.8 | ||
M:85 [LYS] | 1:315 [U] | 4.4 | 1:324 [G] | 61.8 | ||
M:85 [LYS] | 1:316 [U] | 4.24 | 1:323 [U] | 61.8 | ||
M:86 [THR] | 1:32 [A] | 3.4 | 1:48 [OMU] | 59.2 | ||
M:86 [THR] | 1:33 [A] | 3.53 | 1:46 [A] | 59.2 | ||
M:91 [GLY] | 1:313 [U] | 4.87 | 1:326 [A] | 26.8 | ||
M:91 [GLY] | 1:314 [G] | 3.42 | 1:325 [C] | 26.8 | ||
M:92 [MET] | 1:314 [G] | 3.53 | 1:325 [C] | 15.1 | ||
M:92 [MET] | 1:315 [U] | 4.48 | 1:324 [G] | 15.1 | ||
M:93 [LYS] | 1:30 [C] | 4.43 | 1:50 [A] | 69.1 | ||
M:93 [LYS] | 1:313 [U] | 3.35 | 1:326 [A] | base:SC | 69.1 | |
M:93 [LYS] | 1:314 [G] | 3.8 | 1:325 [C] | 69.1 | ||
M:93 [LYS] | 1:326 [A] | 3.41 | 1:313 [U] | 69.1 | ||
M:93 [LYS] | 1:327 [G] | 3.36 | 1:312 [C] | 69.1 | ||
M:94 [LEU] | 1:29 [C] | 3.81 | 1:51 [G] | 9.6 | ||
M:94 [LEU] | 1:30 [C] | 3.33 | 1:50 [A] | 9.6 | ||
M:94 [LEU] | 1:326 [A] | 2.68 | 1:313 [U] | sugar:BB | 9.6 | |
M:94 [LEU] | 1:1654 [A] | 3.31 | 9.6 | |||
M:95 [ASN] | 1:29 [C] | 4.18 | 1:51 [G] | 1.6 | ||
M:95 [ASN] | 1:30 [C] | 2.85 | 1:50 [A] | 1.6 | ||
M:95 [ASN] | 1:314 [G] | 4.36 | 1:325 [C] | 1.6 | ||
M:95 [ASN] | 1:315 [U] | 4.44 | 1:324 [G] | 1.6 | ||
M:95 [ASN] | 1:324 [G] | 4.98 | 1:315 [U] | 1.6 | ||
M:95 [ASN] | 1:325 [C] | 3.56 | 1:314 [G] | 1.6 | ||
M:95 [ASN] | 1:326 [A] | 4.01 | 1:313 [U] | 1.6 | ||
M:96 [LYS] | 1:28 [G] | 3.73 | 1:52 [C] | 52.6 | ||
M:96 [LYS] | 1:29 [C] | 3.67 | 1:51 [G] | 52.6 | ||
M:96 [LYS] | 1:326 [A] | 3.53 | 1:313 [U] | 52.6 | ||
M:96 [LYS] | 1:327 [G] | 4.34 | 1:312 [C] | 52.6 | ||
M:96 [LYS] | 1:1654 [A] | 2.65 | sugar:SC | 52.6 | ||
M:97 [ASN] | 1:326 [A] | 3.17 | 1:313 [U] | 86.5 | ||
M:97 [ASN] | 1:327 [G] | 3.32 | 1:312 [C] | 86.5 | ||
M:98 [ASN] | 1:326 [A] | 4.51 | 1:313 [U] | 11.8 | ||
M:98 [ASN] | 1:327 [G] | 2.91 | 1:312 [C] | 11.8 | ||
M:98 [ASN] | 1:328 [U] | 3.85 | 1:311 [A] | 11.8 | ||
M:101 [VAL] | 1:1654 [A] | 4.16 | 64.7 | |||
M:101 [VAL] | 1:1655 [U] | 4.81 | 64.7 | |||
M:104 [GLN] | 1:28 [G] | 4.13 | 1:52 [C] | 61.2 | ||
M:104 [GLN] | 1:1654 [A] | 3.87 | 61.2 | |||
M:105 [ARG] | 1:1653 [U] | 3.53 | base/AA stacks | 85.0 | ||
M:105 [ARG] | 1:1654 [A] | 4.07 | 85.0 | |||
M:105 [ARG] | 1:1655 [U] | 2.54 | 85.0 | |||
M:108 [LYS] | 1:1653 [U] | 3.25 | 66.4 | |||
M:108 [LYS] | 1:1655 [U] | 2.78 | 66.4 | |||
M:108 [LYS] | 1:1656 [A] | 2.96 | 1:1652 [U] | 66.4 | ||
M:109 [ARG] | 1:1650 [C] | 4.7 | 1:1659 [G] | 59.7 | ||
M:109 [ARG] | 1:1651 [G] | 4.81 | 1:1658 [C] | 59.7 | ||
M:109 [ARG] | 7:1933 [G] | 4.34 | 1:17 [C] | 59.7 | ||
M:110 [PHE] | 7:1933 [G] | 3.69 | 1:17 [C] | 45.1 | ||
M:110 [PHE] | 7:1934 [C] | 3.54 | 1:16 [G] | 45.1 | ||
M:111 [GLY] | 1:18 [A] | 3.58 | 7:1932 [U] | 60.3 | ||
M:112 [ASN] | 1:16 [G] | 3.12 | 7:1934 [C] | base:SC | 92.4 | |
M:112 [ASN] | 1:17 [C] | 3.21 | 7:1933 [G] | 92.4 | ||
M:112 [ASN] | 1:18 [A] | 3.54 | 7:1932 [U] | 92.4 | ||
M:112 [ASN] | 7:1933 [G] | 3.97 | 1:17 [C] | 92.4 | ||
M:112 [ASN] | 7:1934 [C] | 2.93 | 1:16 [G] | base:SC, sugar:SC | 92.4 | |
M:112 [ASN] | 7:1935 [C] | 4.13 | 1:15 [G] | 92.4 | ||
M:113 [LEU] | 7:1934 [C] | 3.68 | 1:16 [G] | 65.0 | ||
M:113 [LEU] | 7:1935 [C] | 3.88 | 1:15 [G] | 65.0 | ||
M:117 [ASN] | 1:357 [A] | 2.86 | 1:112 [U] | 78.5 | ||
M:117 [ASN] | 1:358 [G] | 3.69 | 1:111 [C] | 78.5 | ||
M:120 [TRP] | 1:306 [G] | 3.7 | 0.0 | |||
M:123 [MET] | 1:306 [G] | 3.79 | 60.8 | |||
M:123 [MET] | 1:329 [G] | 4.82 | 1:310 [C] | 60.8 | ||
M:123 [MET] | 1:331 [C] | 4.8 | 1:308 [A] | 60.8 | ||
M:127 [PHE] | 1:1652 [U] | 4.18 | 1:1656 [A] | 46.8 | ||
M:128 [LYS] | 1:328 [U] | 3.99 | 1:311 [A] | 49.9 | ||
M:136 [ASP] | 1:16 [G] | 4.96 | 7:1934 [C] | 94.5 | ||
M:136 [ASP] | 7:1935 [C] | 2.41 | 1:15 [G] | sugar:SC | 94.5 | |
M:136 [ASP] | 7:1936 [A] | 4.78 | 1:14 [U] | 94.5 | ||
M:138 [MET] | 1:16 [G] | 3.89 | 7:1934 [C] | 13.1 | ||
M:138 [MET] | 1:17 [C] | 3.63 | 7:1933 [G] | 13.1 | ||
M:140 [LYS] | 1:125 [G] | 3.39 | 1:140 [U] | 65.4 | ||
M:140 [LYS] | 1:126 [G] | 3.41 | 1:139 [C] | 65.4 | ||
M:140 [LYS] | 1:133 [C] | 4.39 | 65.4 | |||
M:141 [THR] | 1:124 [C] | 3.17 | 1:142 [G] | sugar:SC | 47.4 | |
M:141 [THR] | 1:125 [G] | 3.27 | 1:140 [U] | 47.4 | ||
M:144 [ARG] | 1:125 [G] | 3.7 | 1:140 [U] | 41.3 | ||
M:144 [ARG] | 1:134 [A] | 3.76 | 1:130 [U] | 41.3 | ||
M:144 [ARG] | 1:135 [A] | 3.46 | 41.3 | |||
M:145 [ASP] | 1:149 [G] | 4.35 | 1:119 [C] | 80.9 | ||
M:147 [ARG] | 1:112 [U] | 3.23 | 1:357 [A] | 14.8 | ||
M:147 [ARG] | 1:113 [C] | 3.48 | 1:304 [G] | 14.8 | ||
M:147 [ARG] | 1:149 [G] | 3.62 | 1:119 [C] | 14.8 | ||
M:147 [ARG] | 1:150 [G] | 3.29 | 1:118 [C] | 14.8 | ||
M:150 [TRP] | 1:358 [G] | 3.16 | 1:111 [C] | 23.3 | ||
M:150 [TRP] | 1:359 [U] | 3.51 | 1:110 [A] | 23.3 | ||
M:154 [SER] | 1:55 [A] | 2.85 | 8.6 | |||
M:154 [SER] | 1:56 [G] | 3.02 | 1:25 [C] | 8.6 | ||
M:155 [VAL] | 1:55 [A] | 3.31 | 55.8 | |||
M:155 [VAL] | 1:56 [G] | 4.18 | 1:25 [C] | 55.8 | ||
M:155 [VAL] | 1:59 [A] | 3.85 | 55.8 | |||
M:155 [VAL] | 1:60 [A] | 4.14 | 55.8 | |||
M:155 [VAL] | 1:360 [U] | 4.64 | 1:63 [A] | 55.8 | ||
M:156 [HIS] | 1:55 [A] | 4.71 | 76.1 | |||
M:156 [HIS] | 1:359 [U] | 3.83 | 1:110 [A] | 76.1 | ||
M:156 [HIS] | 1:360 [U] | 3.59 | 1:63 [A] | 76.1 | ||
M:157 [LYS] | 1:19 [G] | 4.79 | 7:1931 [A] | 68.7 | ||
M:157 [LYS] | 1:55 [A] | 3.53 | 68.7 | |||
M:157 [LYS] | 1:56 [G] | 3.9 | 1:25 [C] | 68.7 | ||
M:157 [LYS] | 7:1818 [G] | 4.35 | 68.7 | |||
M:158 [HIS] | 1:54 [G] | 2.89 | 1:26 [C] | sugar:BB | 78.9 | |
M:158 [HIS] | 1:55 [A] | 3.69 | 78.9 | |||
M:159 [ARG] | 1:358 [G] | 3.94 | 1:111 [C] | 97.2 | ||
M:159 [ARG] | 1:359 [U] | 3.35 | 1:110 [A] | 97.2 | ||
M:161 [GLN] | 1:27 [C] | 4.42 | 1:53 [G] | 22.7 | ||
M:161 [GLN] | 1:28 [G] | 3.77 | 1:52 [C] | 22.7 | ||
M:161 [GLN] | 1:53 [G] | 2.79 | 1:27 [C] | base:BB, sugar:SC | 22.7 | |
M:161 [GLN] | 1:54 [G] | 3.6 | 1:26 [C] | 22.7 | ||
M:162 [ARG] | 1:27 [C] | 2.26 | 1:53 [G] | sugar:BB | 91.5 | |
M:162 [ARG] | 1:28 [G] | 2.96 | 1:52 [C] | 91.5 | ||
M:162 [ARG] | 1:53 [G] | 3.67 | 1:27 [C] | 91.5 | ||
M:162 [ARG] | 1:54 [G] | 3.37 | 1:26 [C] | sugar:SC | 91.5 | |
M:162 [ARG] | 1:55 [A] | 4.07 | base/AA stacks | 91.5 | ||
M:162 [ARG] | 1:59 [A] | 3.88 | 91.5 | |||
M:162 [ARG] | 1:60 [A] | 3.5 | 91.5 | |||
M:163 [GLY] | 1:27 [C] | 4.48 | 1:53 [G] | 78.3 | ||
M:163 [GLY] | 1:28 [G] | 3.96 | 1:52 [C] | 78.3 | ||
M:163 [GLY] | 1:61 [A] | 4.79 | 78.3 | |||
M:164 [LEU] | 1:27 [C] | 4.04 | 1:53 [G] | 72.3 | ||
M:164 [LEU] | 1:60 [A] | 3.3 | 72.3 | |||
M:164 [LEU] | 1:61 [A] | 4.39 | 72.3 | |||
M:164 [LEU] | 1:358 [G] | 4.7 | 1:111 [C] | 72.3 | ||
M:164 [LEU] | 1:359 [U] | 4.73 | 1:110 [A] | 72.3 | ||
M:165 [THR] | 1:358 [G] | 4.13 | 1:111 [C] | 92.5 | ||
M:166 [SER] | 1:356 [A] | 4.02 | 79.5 | |||
M:166 [SER] | 1:357 [A] | 2.85 | 1:112 [U] | 79.5 | ||
M:166 [SER] | 1:358 [G] | 3.55 | 1:111 [C] | 79.5 | ||
M:169 [ARG] | 1:61 [A] | 3.65 | 60.5 | |||
M:169 [ARG] | 1:62 [G] | 2.45 | 1:361 [A] | 60.5 | ||
M:169 [ARG] | 1:358 [G] | 4.85 | 1:111 [C] | 60.5 | ||
M:170 [LYS] | 1:308 [A] | 3.28 | 1:331 [C] | 65.2 | ||
M:170 [LYS] | 1:309 [G] | 4.53 | 1:330 [U] | 65.2 | ||
M:170 [LYS] | 1:325 [C] | 3.18 | 1:314 [G] | 65.2 | ||
M:170 [LYS] | 1:326 [A] | 3.41 | 1:313 [U] | 65.2 | ||
M:171 [HIS] | 1:28 [G] | 3.09 | 1:52 [C] | 54.9 | ||
M:171 [HIS] | 1:29 [C] | 3.22 | 1:51 [G] | 54.9 | ||
M:171 [HIS] | 1:325 [C] | 3.32 | 1:314 [G] | sugar:BB | 54.9 | |
M:171 [HIS] | 1:326 [A] | 3.9 | 1:313 [U] | 54.9 | ||
M:172 [ARG] | 1:27 [C] | 3.55 | 1:53 [G] | 87.9 | ||
M:172 [ARG] | 1:28 [G] | 3.23 | 1:52 [C] | 87.9 | ||
M:172 [ARG] | 1:29 [C] | 4.88 | 1:51 [G] | 87.9 | ||
M:172 [ARG] | 1:60 [A] | 3.27 | sugar:SC | 87.9 | ||
M:172 [ARG] | 1:61 [A] | 3.17 | 87.9 | |||
M:172 [ARG] | 1:324 [G] | 4.68 | 1:315 [U] | 87.9 | ||
M:173 [GLY] | 1:324 [G] | 3.64 | 1:315 [U] | 68.0 | ||
M:173 [GLY] | 1:325 [C] | 4.23 | 1:314 [G] | 68.0 | ||
M:174 [LEU] | 1:61 [A] | 3.75 | 65.7 | |||
M:174 [LEU] | 1:62 [G] | 4.23 | 1:361 [A] | 65.7 | ||
M:175 [ARG] | 1:325 [C] | 4.47 | 1:314 [G] | 42.7 | ||
M:175 [ARG] | 1:355 [A] | 4.48 | 42.7 | |||
M:175 [ARG] | 1:356 [A] | 3.42 | 42.7 | |||
M:175 [ARG] | 1:357 [A] | 4.46 | 1:112 [U] | 42.7 | ||
M:176 [HIS] | 1:309 [G] | 4.87 | 1:330 [U] | 26.4 | ||
M:176 [HIS] | 1:324 [G] | 3.51 | 1:315 [U] | 26.4 | ||
M:176 [HIS] | 1:325 [C] | 3.48 | 1:314 [G] | 26.4 | ||
M:177 [LYS] | 1:62 [G] | 3.77 | 1:361 [A] | 64.1 | ||
M:177 [LYS] | 1:63 [A] | 2.45 | 1:360 [U] | 64.1 | ||
M:177 [LYS] | 1:64 [A] | 4.33 | 1:74 [G] | 64.1 | ||
M:177 [LYS] | 1:65 [A] | 3.15 | 64.1 | |||
M:177 [LYS] | 1:66 [A] | 4.46 | 1:73 [U] | 64.1 | ||
M:178 [GLY] | 1:66 [A] | 3.21 | 1:73 [U] | 59.5 | ||
M:178 [GLY] | 1:67 [C] | 3.35 | 1:72 [G] | 59.5 | ||
M:179 [HIS] | 1:66 [A] | 4.5 | 1:73 [U] | 48.7 | ||
M:179 [HIS] | 1:67 [C] | 2.65 | 1:72 [G] | 48.7 | ||
M:179 [HIS] | 1:319 [G] | 2.75 | base:BB, base:BB | 48.7 | ||
M:179 [HIS] | 1:323 [U] | 4.16 | 1:316 [U] | 48.7 | ||
M:179 [HIS] | 1:340 [A] | 3.53 | 1:351 [U] | 48.7 | ||
M:179 [HIS] | 1:341 [G] | 2.85 | 1:350 [C] | 48.7 | ||
M:179 [HIS] | 1:342 [G] | 3.25 | base/AA stacks | 48.7 | ||
M:180 [LYS] | 1:319 [G] | 4.57 | 44.6 | |||
M:180 [LYS] | 1:323 [U] | 3.24 | 1:316 [U] | 44.6 | ||
M:180 [LYS] | 1:324 [G] | 3.28 | 1:315 [U] | 44.6 | ||
M:180 [LYS] | 1:340 [A] | 3.27 | 1:351 [U] | 44.6 | ||
M:180 [LYS] | 1:341 [G] | 3.16 | 1:350 [C] | 44.6 | ||
M:181 [ALA] | 1:323 [U] | 4.67 | 1:316 [U] | 35.7 | ||
M:182 [SER] | 1:98 [A] | 4.27 | 1:85 [U] | 49.2 | ||
M:182 [SER] | 1:99 [A] | 3.91 | 1:83 [A] | 49.2 | ||
M:182 [SER] | 1:318 [G] | 3.76 | base:SC | 49.2 | ||
M:182 [SER] | 1:319 [G] | 3.35 | 49.2 | |||
M:183 [LYS] | 1:97 [G] | 3.41 | 1:87 [A] | 63.7 | ||
M:183 [LYS] | 1:98 [A] | 3.71 | 1:85 [U] | 63.7 | ||
M:183 [LYS] | 1:317 [U] | 3.7 | 63.7 | |||
M:183 [LYS] | 1:318 [G] | 3.31 | 63.7 | |||
M:183 [LYS] | 1:319 [G] | 3.4 | 63.7 | |||
M:184 [LEU] | 1:324 [G] | 3.61 | 1:315 [U] | 36.2 | ||
M:185 [ARG] | 1:61 [A] | 2.81 | 74.8 | |||
M:185 [ARG] | 1:62 [G] | 2.55 | 1:361 [A] | 74.8 | ||
M:185 [ARG] | 1:77 [U] | 3.56 | 1:105 [A] | 74.8 | ||
M:186 [PRO] | 1:60 [A] | 3.76 | 54.5 | |||
M:186 [PRO] | 1:61 [A] | 3.25 | 54.5 | |||
M:186 [PRO] | 1:77 [U] | 3.69 | 1:105 [A] | 54.5 | ||
M:186 [PRO] | 1:78 [C] | 4.26 | 1:104 [G] | 54.5 | ||
M:187 [SER] | 1:27 [C] | 3.33 | 1:53 [G] | 85.0 | ||
M:187 [SER] | 1:28 [G] | 3.0 | 1:52 [C] | 85.0 | ||
M:187 [SER] | 1:60 [A] | 4.45 | 85.0 | |||
M:188 [TYR] | 1:28 [G] | 4.79 | 1:52 [C] | 25.2 | ||
M:188 [TYR] | 1:47 [C] | 3.25 | 25.2 | |||
M:188 [TYR] | 1:316 [U] | 4.88 | 1:323 [U] | 25.2 | ||
M:188 [TYR] | 1:324 [G] | 3.42 | 1:315 [U] | sugar:SC | 25.2 | |
M:189 [ARG] | 1:26 [C] | 4.39 | 1:54 [G] | 57.5 | ||
M:189 [ARG] | 1:27 [C] | 3.41 | 1:53 [G] | 57.5 | ||
M:189 [ARG] | 1:28 [G] | 4.8 | 1:52 [C] | 57.5 | ||
M:189 [ARG] | 1:48 [OMU] | 3.57 | 1:32 [A] | 57.5 | ||
M:189 [ARG] | 1:49 [C] | 4.4 | 1:31 [G] | 57.5 | ||
M:190 [ALA] | 1:27 [C] | 3.46 | 1:53 [G] | 74.8 | ||
M:190 [ALA] | 1:78 [C] | 4.42 | 1:104 [G] | 74.8 | ||
M:192 [TRP] | 1:46 [A] | 4.02 | 1:33 [A] | 9.8 | ||
M:192 [TRP] | 1:47 [C] | 2.36 | 9.8 | |||
M:192 [TRP] | 1:48 [OMU] | 3.96 | 1:32 [A] | 9.8 | ||
M:193 [ARG] | 1:25 [C] | 4.44 | 1:56 [G] | 45.2 | ||
M:193 [ARG] | 1:26 [C] | 3.27 | 1:54 [G] | 45.2 | ||
M:193 [ARG] | 1:367 [A] | 3.6 | base/AA stacks | 45.2 | ||
M:194 [ARG] | 1:77 [U] | 4.74 | 1:105 [A] | 56.8 | ||
M:194 [ARG] | 1:78 [C] | 2.86 | 1:104 [G] | 56.8 | ||
M:194 [ARG] | 1:79 [U] | 4.21 | 1:103 [G] | 56.8 | ||
M:194 [ARG] | 1:99 [A] | 4.33 | 1:83 [A] | 56.8 | ||
M:195 [ASN] | 1:98 [A] | 3.02 | 1:85 [U] | 13.7 | ||
M:195 [ASN] | 1:99 [A] | 4.13 | 1:83 [A] | 13.7 | ||
M:196 [ASN] | 1:47 [C] | 4.48 | 57.4 | |||
M:196 [ASN] | 1:97 [G] | 3.7 | 1:87 [A] | 57.4 | ||
M:197 [ARG] | 1:78 [C] | 3.79 | 1:104 [G] | 42.6 | ||
M:197 [ARG] | 1:79 [U] | 3.06 | 1:103 [G] | 42.6 | ||
M:197 [ARG] | 1:364 [U] | 4.59 | 42.6 | |||
M:197 [ARG] | 1:365 [A] | 4.93 | 42.6 | |||
M:197 [ARG] | 1:367 [A] | 3.97 | 42.6 | |||
M:199 [VAL] | 1:80 [C] | 3.25 | 1:102 [G] | 44.6 | ||
M:200 [PHE] | 1:696 [A] | 3.09 | 1:849 [U] | 72.0 | ||
M:200 [PHE] | 1:697 [A2M] | 4.79 | 1:848 [U] | 72.0 | ||
M:201 [LEU] | 1:80 [C] | 3.76 | 1:102 [G] | 55.0 | ||
M:201 [LEU] | 1:81 [U] | 4.39 | 1:101 [A] | 55.0 | ||
M:201 [LEU] | 1:714 [G] | 3.54 | 55.0 | |||
M:201 [LEU] | 1:715 [G] | 4.49 | 1:735 [U] | 55.0 | ||
M:202 [ARG] | 1:715 [G] | 4.44 | 1:735 [U] | 75.0 | ||
M:202 [ARG] | 1:729 [A] | 3.43 | 75.0 | |||
M:202 [ARG] | 1:730 [G] | 2.71 | 1:721 [U] | 75.0 | ||
M:203 [LYS] | 1:714 [G] | 4.13 | 12.2 | |||
M:203 [LYS] | 1:730 [G] | 3.4 | 1:721 [U] | 12.2 | ||
M:203 [LYS] | 1:731 [U] | 4.27 | 1:720 [A] | 12.2 | ||
M:204 [ARG] | 1:696 [A] | 2.92 | 1:849 [U] | 76.0 | ||
M:204 [ARG] | 1:697 [A2M] | 2.78 | 1:848 [U] | 76.0 | ||
M:204 [ARG] | 1:841 [U] | 4.19 | 1:704 [G] | 76.0 |
*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)
Properties of this interface
Interolog group ID | Structure ID |
Structure description |
UniProt ID |
ECOD label(s) |
RFAM label(s) |
Is ribosome? | RCSB PDB link |
---|---|---|---|---|---|---|---|
group106 | 6AZ3_M_1,7 | M: Ribosomal protein l15, Leishmania donovani (natural) 1: rRNA alpha, Leishmania donovani (natural) 7: rRNA 5.8s, Leishmania donovani (natural) | E9BMB4 | Ribosomal proteins S24e, L23 and L15e | Eukaryotic large subunit ribosomal RNA & 5.8S ribosomal RNA | ✔ |
Interologs
Total number of interologs for this interface: 5
Interface 1 | Interface 2 |
Percentage conservation |
Interface TM-score |
Interface RMSD |
Percentage identity |
Common ECOD label(s) |
Common RFAM label(s) |
Explore both interfaces |
---|---|---|---|---|---|---|---|---|
1JJ2_L_0 | 6AZ3_M_1,7 | 0.72 | 0.72 | 1.83 | 0.35 | Ribosomal proteins S24e, L23 and L15e | compare | |
1VQ8_M_0 | 6AZ3_M_1,7 | 0.76 | 0.72 | 1.72 | 0.32 | Ribosomal proteins S24e, L23 and L15e | compare | |
1YHQ_M_0 | 6AZ3_M_1,7 | 0.72 | 0.72 | 1.71 | 0.32 | Ribosomal proteins S24e, L23 and L15e | compare | |
3CC2_M_0 | 6AZ3_M_1,7 | 0.72 | 0.72 | 1.84 | 0.34 | Ribosomal proteins S24e, L23 and L15e | compare | |
6AZ3_M_1,7 | 7O7Y_BN_B5,B8 | 0.81 | 0.93 | 0.85 | 0.54 | Ribosomal proteins S24e, L23 and L15e | 5.8S ribosomal RNA & Eukaryotic large subunit ribosomal RNA | compare |