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All interfaces > All interologs > Interface groups > group106 > 7O7Y_BN_B5,B8

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Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

7O7Y_BN
7O7Y_B5,B8
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
BN:2 [GLY] B5:115 [C] 2.96 57.15
BN:2 [GLY] B5:116 [G] 2.56 B5:155 [C] 57.15
BN:3 [ALA] B5:115 [C] 4.12 25.37
BN:4 [TYR] B5:114 [G] 3.14 B5:156 [G] 57.76
BN:4 [TYR] B5:115 [C] 3.62 57.76
BN:4 [TYR] B5:150 [U] 4.78 57.76
BN:4 [TYR] B5:151 [G] 2.38 B5:120 [A] 57.76
BN:5 [LYS] B5:114 [G] 4.25 B5:156 [G] 52.66
BN:5 [LYS] B5:115 [C] 3.08 52.66
BN:5 [LYS] B5:277 [G] 3.72 52.66
BN:8 [GLN] B5:114 [G] 4.94 B5:156 [G] 38.47
BN:8 [GLN] B5:277 [G] 4.51 38.47
BN:8 [GLN] B5:278 [G] 3.1 B5:112 [C] 38.47
BN:8 [GLN] B5:279 [A] 3.19 B5:307 [A] 38.47
BN:11 [TRP] B5:279 [A] 3.78 B5:307 [A] 39.07
BN:11 [TRP] B5:280 [G] 4.24 39.07
BN:12 [ARG] B5:277 [G] 4.99 56.73
BN:12 [ARG] B5:278 [G] 2.89 B5:112 [C] 56.73
BN:12 [ARG] B5:279 [A] 2.99 B5:307 [A] base/AA stacks 56.73
BN:12 [ARG] B5:306 [A] 4.78 B5:281 [U] 56.73
BN:12 [ARG] B5:307 [A] 3.7 B5:279 [A] 56.73
BN:12 [ARG] B5:308 [G] 2.48 base:SC 56.73
BN:12 [ARG] B5:329 [A] 4.62 56.73
BN:13 [LYS] B5:307 [A] 3.96 B5:279 [A] 47.63
BN:14 [LYS] B5:279 [A] 3.38 B5:307 [A] sugar:SC 53.9
BN:14 [LYS] B5:280 [G] 2.82 53.9
BN:15 [GLN] B5:280 [G] 3.15 base:SC 25.3
BN:15 [GLN] B5:304 [C] 4.91 B5:283 [G] 25.3
BN:15 [GLN] B5:305 [A] 2.86 B5:282 [C] 25.3
BN:15 [GLN] B5:306 [A] 3.6 B5:281 [U] 25.3
BN:20 [ARG] B5:3671 [G] 3.84 B5:3802 [C] 29.5
BN:24 [ARG] B5:3669 [C] 4.81 B5:3919 [G] 65.05
BN:24 [ARG] B5:3670 [G] 2.46 B5:3918 [A] 65.05
BN:24 [ARG] B5:3804 [G] 3.45 65.05
BN:28 [TRP] B5:3805 [A] 3.58 B5:3915 [G] 40.59
BN:28 [TRP] B5:3806 [C] 4.03 B5:3914 [G] 40.59
BN:31 [ARG] B5:3805 [A] 2.67 B5:3915 [G] sugar:SC 92.61
BN:31 [ARG] B5:3806 [C] 2.82 B5:3914 [G] 92.61
BN:32 [GLN] B5:3805 [A] 4.64 B5:3915 [G] 48.28
BN:32 [GLN] B5:3806 [C] 3.06 B5:3914 [G] 48.28
BN:33 [LEU] B5:2300 [G] 3.58 B5:2307 [C] 41.42
BN:34 [SER] B5:2299 [G] 3.66 B5:2308 [C] 42.53
BN:34 [SER] B5:2300 [G] 3.32 B5:2307 [C] 42.53
BN:35 [ALA] B5:2300 [G] 3.41 B5:2307 [C] 54.71
BN:35 [ALA] B5:2301 [C] 4.29 B5:2306 [G] 54.71
BN:37 [HIS] B5:9 [C] 2.85 B8:4955 [G] 17.52
BN:38 [ARG] B5:9 [C] 3.63 B8:4955 [G] 81.82
BN:38 [ARG] B8:4948 [C] 4.88 B5:17 [A] 81.82
BN:38 [ARG] B8:4949 [C] 2.54 B5:16 [G] 81.82
BN:38 [ARG] B8:4950 [U] 2.86 B5:15 [A] 81.82
BN:39 [ALA] B5:9 [C] 4.91 B8:4955 [G] 58.61
BN:40 [PRO] B5:8 [U] 3.25 B8:4956 [A] 58.97
BN:40 [PRO] B5:9 [C] 3.29 B8:4955 [G] 58.97
BN:41 [ARG] B5:7 [C] 3.95 B8:4957 [G] 52.94
BN:41 [ARG] B5:8 [U] 2.88 B8:4956 [A] 52.94
BN:41 [ARG] B5:149 [A] 4.81 52.94
BN:41 [ARG] B5:150 [U] 3.39 base/AA stacks 52.94
BN:42 [PRO] B5:150 [U] 4.77 98.9
BN:44 [ARG] B5:279 [A] 4.63 B5:307 [A] 85.23
BN:44 [ARG] B5:280 [G] 2.49 85.23
BN:45 [PRO] B5:150 [U] 4.55 66.89
BN:45 [PRO] B5:151 [G] 3.79 B5:120 [A] 66.89
BN:46 [ASP] B5:113 [A] 4.4 B5:157 [U] 58.14
BN:47 [LYS] B5:278 [G] 4.09 B5:112 [C] 82.61
BN:47 [LYS] B5:279 [A] 2.6 B5:307 [A] 82.61
BN:47 [LYS] B5:280 [G] 3.86 82.61
BN:47 [LYS] B5:330 [G] 3.51 B5:111 [C] 82.61
BN:49 [ARG] B5:113 [A] 3.07 B5:157 [U] 90.44
BN:49 [ARG] B5:114 [G] 2.85 B5:156 [G] 90.44
BN:49 [ARG] B5:151 [G] 3.15 B5:120 [A] 90.44
BN:49 [ARG] B5:152 [U] 2.4 B5:121 [A] 90.44
BN:50 [ARG] B5:112 [C] 4.96 B5:278 [G] 54.99
BN:50 [ARG] B5:113 [A] 3.18 B5:157 [U] 54.99
BN:50 [ARG] B5:278 [G] 2.93 B5:112 [C] base:BB 54.99
BN:50 [ARG] B5:279 [A] 3.07 B5:307 [A] 54.99
BN:50 [ARG] B5:330 [G] 3.47 B5:111 [C] 54.99
BN:51 [LEU] B5:330 [G] 3.28 B5:111 [C] 75.51
BN:52 [GLY] B5:330 [G] 4.41 B5:111 [C] 95.57
BN:53 [TYR] B5:151 [G] 4.47 B5:120 [A] 86.46
BN:54 [LYS] B5:112 [C] 4.25 B5:278 [G] 85.97
BN:54 [LYS] B5:113 [A] 4.02 B5:157 [U] 85.97
BN:54 [LYS] B5:152 [U] 3.63 B5:121 [A] 85.97
BN:54 [LYS] B5:153 [G] 3.27 B5:118 [C] 85.97
BN:55 [ALA] B5:148 [A] 3.69 93.35
BN:55 [ALA] B5:151 [G] 3.6 B5:120 [A] 93.35
BN:55 [ALA] B5:152 [U] 2.76 B5:121 [A] 93.35
BN:56 [LYS] B5:147 [A] 4.7 B5:122 [U] 86.39
BN:56 [LYS] B5:152 [U] 3.19 B5:121 [A] 86.39
BN:56 [LYS] B5:153 [G] 2.7 B5:118 [C] 86.39
BN:57 [GLN] B5:123 [C] 4.93 B5:146 [G] 72.47
BN:57 [GLN] B5:124 [C] 3.47 B5:145 [G] 72.47
BN:57 [GLN] B5:146 [G] 4.19 B5:123 [C] 72.47
BN:57 [GLN] B5:147 [A] 3.24 B5:122 [U] 72.47
BN:57 [GLN] B8:4950 [U] 3.35 B5:15 [A] 72.47
BN:57 [GLN] B8:4951 [G] 2.86 B5:14 [C] 72.47
BN:58 [GLY] B8:4949 [C] 4.57 B5:16 [G] 92.68
BN:58 [GLY] B8:4950 [U] 3.97 B5:15 [A] 92.68
BN:59 [TYR] B8:4950 [U] 4.44 B5:15 [A] 30.68
BN:60 [VAL] B8:4949 [C] 3.27 B5:16 [G] 66.02
BN:60 [VAL] B8:4950 [U] 3.28 B5:15 [A] 66.02
BN:62 [TYR] B8:4948 [C] 3.08 B5:17 [A] 73.34
BN:62 [TYR] B8:4949 [C] 2.71 B5:16 [G] 73.34
BN:65 [ARG] B5:2300 [G] 2.8 B5:2307 [C] 79.71
BN:65 [ARG] B5:2301 [C] 3.07 B5:2306 [G] 79.71
BN:67 [ARG] B5:2301 [C] 3.33 B5:2306 [G] 54.2
BN:67 [ARG] B5:2302 [G] 3.31 54.2
BN:67 [ARG] B5:3404 [G] 3.7 B5:3401 [G] 54.2
BN:67 [ARG] B5:3405 [C] 3.74 54.2
BN:67 [ARG] B5:3920 [U] 4.05 B5:3668 [A] 54.2
BN:67 [ARG] B5:3921 [G] 4.94 B5:3667 [C] 54.2
BN:68 [ARG] B5:301 [G] 4.67 B5:286 [U] 72.74
BN:68 [ARG] B5:302 [C] 2.62 B5:285 [G] 72.74
BN:68 [ARG] B5:303 [C] 2.62 B5:284 [G] 72.74
BN:68 [ARG] B5:3921 [G] 4.14 B5:3667 [C] 72.74
BN:69 [GLY] B5:301 [G] 3.27 B5:286 [U] 96.31
BN:69 [GLY] B5:302 [C] 3.6 B5:285 [G] 96.31
BN:69 [GLY] B5:3921 [G] 3.21 B5:3667 [C] 96.31
BN:69 [GLY] B5:3922 [C] 3.69 B5:3666 [G] 96.31
BN:70 [GLY] B5:301 [G] 3.35 B5:286 [U] 55.77
BN:70 [GLY] B5:3921 [G] 4.06 B5:3667 [C] 55.77
BN:70 [GLY] B5:3922 [C] 2.82 B5:3666 [G] 55.77
BN:71 [ARG] B5:31 [U] 3.36 B5:51 [A] 65.34
BN:71 [ARG] B5:32 [G] 3.25 B5:50 [C] 65.34
BN:71 [ARG] B5:2303 [A] 3.14 base:SC 65.34
BN:72 [LYS] B5:3402 [C] 3.28 57.99
BN:72 [LYS] B5:3403 [G] 2.62 57.99
BN:72 [LYS] B5:3660 [A] 3.76 B5:3928 [G] 57.99
BN:72 [LYS] B5:3661 [G] 2.74 B5:3927 [U] 57.99
BN:73 [ARG] B5:32 [G] 3.09 B5:50 [C] 74.11
BN:73 [ARG] B5:33 [A] 4.07 B5:49 [U] 74.11
BN:73 [ARG] B5:3402 [C] 4.51 74.11
BN:74 [PRO] B5:3402 [C] 3.41 44.38
BN:75 [VAL] B5:3402 [C] 3.26 52.3
BN:76 [PRO] B5:1581 [G] 4.48 B5:1591 [U] 48.26
BN:76 [PRO] B5:3402 [C] 3.59 48.26
BN:77 [LYS] B5:1580 [OMG] 4.87 34.19
BN:77 [LYS] B5:1581 [G] 2.41 B5:1591 [U] 34.19
BN:77 [LYS] B5:3400 [C] 4.99 B5:3406 [G] 34.19
BN:77 [LYS] B5:3401 [G] 3.32 B5:3404 [G] 34.19
BN:77 [LYS] B5:3402 [C] 3.32 34.19
BN:77 [LYS] B5:3660 [A] 3.47 B5:3928 [G] 34.19
BN:77 [LYS] B5:3930 [G] 4.44 B5:3659 [U] 34.19
BN:78 [GLY] B5:3659 [U] 3.51 B5:3930 [G] sugar:BB 46.95
BN:78 [GLY] B5:3660 [A] 3.59 B5:3928 [G] 46.95
BN:79 [ALA] B5:3931 [G] 3.63 B5:3658 [C] 79.2
BN:79 [ALA] B5:3932 [A] 4.81 B5:3657 [OMU] 79.2
BN:80 [THR] B5:1483 [U] 4.15 B5:1601 [A] 70.53
BN:80 [THR] B5:3932 [A] 4.92 B5:3657 [OMU] 70.53
BN:81 [TYR] B5:33 [A] 4.73 B5:49 [U] 40.29
BN:81 [TYR] B5:34 [A] 4.64 B5:47 [A] 40.29
BN:81 [TYR] B5:1482 [A] 3.73 B5:1602 [U] 40.29
BN:81 [TYR] B5:1483 [U] 4.62 B5:1601 [A] 40.29
BN:81 [TYR] B5:1580 [OMG] 3.13 40.29
BN:81 [TYR] B5:1581 [G] 3.34 B5:1591 [U] 40.29
BN:81 [TYR] B5:3932 [A] 3.98 B5:3657 [OMU] 40.29
BN:81 [TYR] B5:3933 [G] 4.88 B5:3656 [C] 40.29
BN:82 [GLY] B5:33 [A] 4.68 B5:49 [U] 83.45
BN:82 [GLY] B5:34 [A] 3.5 B5:47 [A] 83.45
BN:82 [GLY] B5:3932 [A] 3.23 B5:3657 [OMU] sugar:BB 83.45
BN:82 [GLY] B5:3933 [G] 3.34 B5:3656 [C] 83.45
BN:83 [LYS] B5:34 [A] 2.84 B5:47 [A] 79.7
BN:83 [LYS] B5:35 [U] 3.24 79.7
BN:83 [LYS] B5:36 [U] 2.84 B5:45 [U] base:SC 79.7
BN:83 [LYS] B5:37 [U] 4.46 B5:44 [A] 79.7
BN:83 [LYS] B5:42 [A] 4.41 79.7
BN:83 [LYS] B5:43 [U] 3.7 B5:93 [G] 79.7
BN:83 [LYS] B5:44 [A] 3.82 B5:37 [U] 79.7
BN:83 [LYS] B5:45 [U] 2.84 B5:36 [U] base:SC 79.7
BN:83 [LYS] B5:46 [U] 4.92 79.7
BN:83 [LYS] B5:3933 [G] 4.59 B5:3656 [C] 79.7
BN:84 [PRO] B5:42 [A] 3.98 70.53
BN:84 [PRO] B5:43 [U] 3.38 B5:93 [G] 70.53
BN:84 [PRO] B5:3657 [OMU] 3.62 B5:3932 [A] 70.53
BN:84 [PRO] B5:3658 [C] 4.27 B5:3931 [G] 70.53
BN:84 [PRO] B5:3933 [G] 4.07 B5:3656 [C] 70.53
BN:85 [VAL] B5:43 [U] 2.99 B5:93 [G] 69.9
BN:85 [VAL] B5:44 [A] 3.39 B5:37 [U] 69.9
BN:85 [VAL] B5:289 [C] 4.73 B5:298 [G] 69.9
BN:86 [HIS] B5:33 [A] 3.46 B5:49 [U] 65.71
BN:86 [HIS] B5:34 [A] 3.07 B5:47 [A] 65.71
BN:86 [HIS] B5:46 [U] 4.49 65.71
BN:86 [HIS] B5:47 [A] 3.77 B5:34 [A] 65.71
BN:87 [HIS] B5:3658 [C] 3.18 B5:3931 [G] sugar:SC 53.13
BN:87 [HIS] B5:3659 [U] 3.73 B5:3930 [G] 53.13
BN:87 [HIS] B5:3931 [G] 4.72 B5:3658 [C] 53.13
BN:87 [HIS] B5:3932 [A] 2.93 B5:3657 [OMU] sugar:SC 53.13
BN:87 [HIS] B5:3933 [G] 4.12 B5:3656 [C] 53.13
BN:89 [VAL] B5:3659 [U] 4.57 B5:3930 [G] 59.9
BN:89 [VAL] B5:3660 [A] 3.61 B5:3928 [G] 59.9
BN:90 [ASN] B5:3659 [U] 4.97 B5:3930 [G] 6.52
BN:90 [ASN] B5:3660 [A] 2.8 B5:3928 [G] 6.52
BN:90 [ASN] B5:3661 [G] 2.89 B5:3927 [U] 6.52
BN:91 [GLN] B5:287 [U] 3.04 B5:300 [A] 41.54
BN:91 [GLN] B5:288 [G] 2.87 B5:299 [C] sugar:BB 41.54
BN:91 [GLN] B5:3923 [C] 3.33 B5:3665 [G] 41.54
BN:91 [GLN] B5:3924 [A] 2.68 B5:3664 [U] 41.54
BN:92 [LEU] B5:288 [G] 3.33 B5:299 [C] 35.38
BN:93 [LYS] B5:31 [U] 4.36 B5:51 [A] 65.26
BN:93 [LYS] B5:287 [U] 2.95 B5:300 [A] base:SC, sugar:SC 65.26
BN:93 [LYS] B5:288 [G] 3.23 B5:299 [C] sugar:SC 65.26
BN:93 [LYS] B5:300 [A] 3.31 B5:287 [U] 65.26
BN:93 [LYS] B5:301 [G] 3.66 B5:286 [U] 65.26
BN:93 [LYS] B5:3922 [C] 4.7 B5:3666 [G] 65.26
BN:93 [LYS] B5:3923 [C] 2.91 B5:3665 [G] 65.26
BN:94 [PHE] B5:30 [C] 3.07 B5:52 [G] 18.17
BN:94 [PHE] B5:31 [U] 3.35 B5:51 [A] 18.17
BN:94 [PHE] B5:299 [C] 4.98 B5:288 [G] 18.17
BN:94 [PHE] B5:300 [A] 2.71 B5:287 [U] sugar:BB 18.17
BN:94 [PHE] B5:2303 [A] 3.26 18.17
BN:95 [ALA] B5:30 [C] 3.77 B5:52 [G] 4.2
BN:95 [ALA] B5:31 [U] 3.0 B5:51 [A] 4.2
BN:95 [ALA] B5:299 [C] 2.52 B5:288 [G] sugar:BB 4.2
BN:95 [ALA] B5:300 [A] 3.19 B5:287 [U] 4.2
BN:96 [ARG] B5:29 [G] 3.58 B5:53 [C] 54.58
BN:96 [ARG] B5:30 [C] 3.48 B5:52 [G] 54.58
BN:96 [ARG] B5:299 [C] 4.74 B5:288 [G] 54.58
BN:96 [ARG] B5:300 [A] 3.52 B5:287 [U] 54.58
BN:96 [ARG] B5:301 [G] 4.84 B5:286 [U] 54.58
BN:96 [ARG] B5:2303 [A] 3.34 sugar:SC 54.58
BN:97 [SER] B5:300 [A] 3.28 B5:287 [U] 84.29
BN:97 [SER] B5:301 [G] 3.37 B5:286 [U] 84.29
BN:98 [LEU] B5:300 [A] 4.24 B5:287 [U] 31.42
BN:98 [LEU] B5:301 [G] 2.88 B5:286 [U] 31.42
BN:98 [LEU] B5:302 [C] 3.43 B5:285 [G] 31.42
BN:99 [GLN] B5:281 [U] 4.63 B5:306 [A] 76.97
BN:99 [GLN] B5:301 [G] 4.92 B5:286 [U] 76.97
BN:101 [VAL] B5:2303 [A] 4.28 78.17
BN:101 [VAL] B5:2304 [G] 4.58 78.17
BN:104 [GLU] B5:54 [G] 4.77 B5:28 [C] 61.38
BN:104 [GLU] B5:2303 [A] 2.85 sugar:SC, sugar:SC 61.38
BN:104 [GLU] B5:2304 [G] 3.26 61.38
BN:105 [ARG] B5:2302 [G] 3.12 base/AA stacks 89.4
BN:105 [ARG] B5:2303 [A] 4.03 89.4
BN:105 [ARG] B5:2304 [G] 2.91 89.4
BN:108 [ARG] B5:54 [G] 3.12 B5:28 [C] sugar:SC 59.63
BN:108 [ARG] B5:55 [G] 4.57 B5:27 [C] 59.63
BN:108 [ARG] B5:2304 [G] 3.52 59.63
BN:108 [ARG] B5:2305 [C] 3.3 59.63
BN:109 [HIS] B8:4947 [G] 3.11 B5:18 [C] sugar:BB 59.54
BN:109 [HIS] B8:4948 [C] 2.97 B5:17 [A] 59.54
BN:110 [CYS] B8:4948 [C] 4.1 B5:17 [A] 45.35
BN:111 [GLY] B5:19 [G] 3.5 B8:4946 [C] 53.57
BN:112 [ALA] B5:18 [C] 3.23 B8:4947 [G] sugar:BB 96.21
BN:112 [ALA] B5:19 [G] 3.26 B8:4946 [C] 96.21
BN:112 [ALA] B8:4947 [G] 3.65 B5:18 [C] 96.21
BN:112 [ALA] B8:4948 [C] 4.81 B5:17 [A] 96.21
BN:113 [LEU] B8:4948 [C] 3.92 B5:17 [A] 66.28
BN:113 [LEU] B8:4949 [C] 3.78 B5:16 [G] 66.28
BN:117 [ASN] B5:330 [G] 2.96 B5:111 [C] sugar:SC 85.13
BN:117 [ASN] B5:331 [G] 4.1 B5:110 [C] 85.13
BN:120 [TRP] B5:280 [G] 3.75 0.0
BN:120 [TRP] B5:281 [U] 4.76 B5:306 [A] 0.0
BN:123 [GLU] B5:280 [G] 4.48 61.53
BN:123 [GLU] B5:303 [C] 4.47 B5:284 [G] 61.53
BN:124 [ASP] B5:3669 [C] 3.47 B5:3919 [G] 98.46
BN:125 [SER] B5:3668 [A] 3.7 B5:3920 [U] 81.47
BN:125 [SER] B5:3669 [C] 2.91 B5:3919 [G] base:SC, sugar:BB 81.47
BN:125 [SER] B5:3919 [G] 3.73 B5:3669 [C] 81.47
BN:125 [SER] B5:3920 [U] 3.5 B5:3668 [A] base:SC 81.47
BN:125 [SER] B5:3921 [G] 3.88 B5:3667 [C] 81.47
BN:126 [THR] B5:3920 [U] 3.94 B5:3668 [A] 43.14
BN:127 [TYR] B5:2300 [G] 4.42 B5:2307 [C] 38.56
BN:127 [TYR] B5:2301 [C] 3.15 B5:2306 [G] 38.56
BN:127 [TYR] B5:3405 [C] 4.63 38.56
BN:128 [LYS] B5:301 [G] 4.75 B5:286 [U] 53.25
BN:128 [LYS] B5:302 [C] 2.87 B5:285 [G] 53.25
BN:136 [ASP] B8:4949 [C] 2.98 B5:16 [G] sugar:SC 88.36
BN:138 [PHE] B5:17 [A] 4.09 B8:4948 [C] 5.82
BN:138 [PHE] B5:18 [C] 3.45 B8:4947 [G] 5.82
BN:138 [PHE] B5:19 [G] 4.5 B8:4946 [C] 5.82
BN:139 [HIS] B5:124 [C] 3.73 B5:145 [G] 76.49
BN:139 [HIS] B8:4949 [C] 4.19 B5:16 [G] 76.49
BN:139 [HIS] B8:4950 [U] 3.23 B5:15 [A] sugar:SC 76.49
BN:140 [LYS] B5:124 [C] 3.62 B5:145 [G] 69.73
BN:140 [LYS] B5:125 [C] 3.23 B5:144 [G] 69.73
BN:140 [LYS] B5:137 [G] 3.96 B5:131 [C] 69.73
BN:141 [ALA] B5:123 [C] 3.71 B5:146 [G] 38.85
BN:141 [ALA] B5:124 [C] 3.84 B5:145 [G] 38.85
BN:144 [ARG] B5:124 [C] 3.17 B5:145 [G] 49.38
BN:144 [ARG] B5:125 [C] 2.89 B5:144 [G] 49.38
BN:144 [ARG] B5:137 [G] 2.63 B5:131 [C] 49.38
BN:145 [ASN] B5:153 [G] 3.85 B5:118 [C] 82.49
BN:147 [ASP] B5:111 [C] 4.41 B5:330 [G] 22.02
BN:150 [TRP] B5:331 [G] 3.88 B5:110 [C] 19.92
BN:150 [TRP] B5:332 [C] 3.42 B5:109 [G] 19.92
BN:150 [TRP] B5:333 [U] 4.93 B5:64 [A] 19.92
BN:154 [PRO] B5:56 [A] 3.8 B5:24 [G] 12.32
BN:154 [PRO] B5:57 [G] 3.57 B5:26 [C] 12.32
BN:154 [PRO] B5:58 [G] 4.72 B5:25 [A] 12.32
BN:155 [VAL] B5:56 [A] 4.1 B5:24 [G] 30.98
BN:155 [VAL] B5:57 [G] 4.1 B5:26 [C] 30.98
BN:155 [VAL] B5:60 [A] 3.77 30.98
BN:155 [VAL] B5:61 [A] 3.62 30.98
BN:155 [VAL] B5:333 [U] 4.6 B5:64 [A] 30.98
BN:156 [HIS] B5:332 [C] 4.02 B5:109 [G] 67.12
BN:156 [HIS] B5:333 [U] 3.03 B5:64 [A] 67.12
BN:157 [LYS] B5:55 [G] 3.56 B5:27 [C] 69.77
BN:157 [LYS] B5:56 [A] 3.77 B5:24 [G] 69.77
BN:157 [LYS] B5:57 [G] 2.77 B5:26 [C] 69.77
BN:157 [LYS] B8:4844 [G] 4.78 69.77
BN:158 [HIS] B5:55 [G] 3.33 B5:27 [C] 73.65
BN:158 [HIS] B5:56 [A] 4.04 B5:24 [G] 73.65
BN:159 [ARG] B5:331 [G] 4.0 B5:110 [C] 97.59
BN:159 [ARG] B5:332 [C] 3.39 B5:109 [G] 97.59
BN:161 [MET] B5:28 [C] 4.68 B5:54 [G] 21.28
BN:161 [MET] B5:29 [G] 3.67 B5:53 [C] 21.28
BN:161 [MET] B5:54 [G] 3.37 B5:28 [C] base:BB 21.28
BN:161 [MET] B5:55 [G] 3.45 B5:27 [C] 21.28
BN:162 [ARG] B5:28 [C] 2.48 B5:54 [G] sugar:BB 93.79
BN:162 [ARG] B5:29 [G] 3.33 B5:53 [C] 93.79
BN:162 [ARG] B5:54 [G] 4.29 B5:28 [C] 93.79
BN:162 [ARG] B5:55 [G] 3.6 B5:27 [C] 93.79
BN:162 [ARG] B5:56 [A] 3.72 B5:24 [G] 93.79
BN:162 [ARG] B5:60 [A] 3.66 93.79
BN:162 [ARG] B5:61 [A] 3.02 93.79
BN:163 [GLY] B5:28 [C] 4.66 B5:54 [G] 78.73
BN:163 [GLY] B5:29 [G] 3.93 B5:53 [C] 78.73
BN:163 [GLY] B5:62 [A] 4.54 78.73
BN:164 [LEU] B5:28 [C] 4.78 B5:54 [G] 70.13
BN:164 [LEU] B5:61 [A] 3.35 70.13
BN:164 [LEU] B5:62 [A] 3.54 70.13
BN:164 [LEU] B5:331 [G] 4.69 B5:110 [C] 70.13
BN:164 [LEU] B5:332 [C] 4.98 B5:109 [G] 70.13
BN:165 [THR] B5:331 [G] 4.15 B5:110 [C] 91.03
BN:166 [SER] B5:329 [A] 3.87 76.32
BN:166 [SER] B5:330 [G] 3.04 B5:111 [C] 76.32
BN:166 [SER] B5:331 [G] 3.23 B5:110 [C] 76.32
BN:169 [ARG] B5:62 [A] 4.98 72.13
BN:169 [ARG] B5:63 [G] 2.98 B5:334 [A] 72.13
BN:169 [ARG] B5:331 [G] 4.57 B5:110 [C] 72.13
BN:170 [LYS] B5:281 [U] 4.7 B5:306 [A] 67.77
BN:170 [LYS] B5:299 [C] 3.25 B5:288 [G] 67.77
BN:170 [LYS] B5:300 [A] 3.72 B5:287 [U] 67.77
BN:170 [LYS] B5:329 [A] 3.2 sugar:SC 67.77
BN:170 [LYS] B5:330 [G] 4.74 B5:111 [C] 67.77
BN:171 [SER] B5:29 [G] 4.1 B5:53 [C] 48.42
BN:171 [SER] B5:30 [C] 2.76 B5:52 [G] 48.42
BN:171 [SER] B5:299 [C] 3.22 B5:288 [G] 48.42
BN:171 [SER] B5:300 [A] 3.87 B5:287 [U] 48.42
BN:172 [ARG] B5:28 [C] 3.25 B5:54 [G] 90.83
BN:172 [ARG] B5:29 [G] 2.97 B5:53 [C] 90.83
BN:172 [ARG] B5:30 [C] 4.07 B5:52 [G] 90.83
BN:172 [ARG] B5:61 [A] 2.97 sugar:SC 90.83
BN:172 [ARG] B5:62 [A] 2.42 90.83
BN:172 [ARG] B5:299 [C] 4.92 B5:288 [G] 90.83
BN:173 [GLY] B5:298 [G] 3.7 B5:289 [C] 67.71
BN:173 [GLY] B5:299 [C] 4.21 B5:288 [G] 67.71
BN:174 [LEU] B5:62 [A] 3.87 70.79
BN:174 [LEU] B5:63 [G] 4.17 B5:334 [A] 70.79
BN:175 [GLY] B5:63 [G] 4.8 B5:334 [A] 36.46
BN:176 [LYS] B5:63 [G] 4.24 B5:334 [A] 69.92
BN:176 [LYS] B5:64 [A] 4.07 B5:333 [U] 69.92
BN:176 [LYS] B5:65 [A] 3.0 B5:75 [G] base:SC, sugar:SC 69.92
BN:176 [LYS] B5:66 [A] 4.73 69.92
BN:176 [LYS] B5:67 [C] 3.58 B5:74 [G] 69.92
BN:176 [LYS] B5:76 [A] 2.88 B5:335 [A] sugar:SC 69.92
BN:176 [LYS] B5:77 [U] 4.25 B5:336 [A] 69.92
BN:177 [GLY] B5:67 [C] 3.03 B5:74 [G] 59.89
BN:177 [GLY] B5:68 [U] 3.74 B5:73 [A] 59.89
BN:178 [HIS] B5:67 [C] 4.08 B5:74 [G] 25.87
BN:178 [HIS] B5:68 [U] 2.3 B5:73 [A] 25.87
BN:178 [HIS] B5:293 [G] 2.68 B5:291 [U] base:BB, base:BB 25.87
BN:178 [HIS] B5:297 [U] 4.52 B5:290 [U] 25.87
BN:178 [HIS] B5:313 [U] 3.55 B5:324 [A] 25.87
BN:178 [HIS] B5:314 [G] 3.23 B5:323 [C] 25.87
BN:178 [HIS] B5:315 [G] 3.16 B5:292 [G] base/AA stacks 25.87
BN:179 [LYS] B5:293 [G] 4.48 B5:291 [U] 48.95
BN:179 [LYS] B5:297 [U] 2.94 B5:290 [U] sugar:BB 48.95
BN:179 [LYS] B5:298 [G] 2.83 B5:289 [C] 48.95
BN:179 [LYS] B5:313 [U] 3.66 B5:324 [A] 48.95
BN:179 [LYS] B5:314 [G] 4.63 B5:323 [C] 48.95
BN:180 [PHE] B5:297 [U] 4.7 B5:290 [U] 51.93
BN:180 [PHE] B5:298 [G] 3.8 B5:289 [C] 51.93
BN:180 [PHE] B5:299 [C] 4.26 B5:288 [G] 51.93
BN:181 [HIS] B5:98 [A] 3.79 B5:86 [U] 63.72
BN:181 [HIS] B5:99 [A] 3.27 B5:84 [A] sugar:SC 63.72
BN:181 [HIS] B5:292 [G] 2.74 B5:315 [G] base:SC 63.72
BN:181 [HIS] B5:293 [G] 3.58 B5:291 [U] 63.72
BN:181 [HIS] B5:315 [G] 3.81 B5:292 [G] 63.72
BN:182 [HIS] B5:291 [U] 3.75 B5:293 [G] sugar:SC 60.46
BN:182 [HIS] B5:293 [G] 2.94 B5:291 [U] 60.46
BN:182 [HIS] B5:297 [U] 3.1 B5:290 [U] base:SC 60.46
BN:182 [HIS] B5:298 [G] 3.67 B5:289 [C] 60.46
BN:183 [THR] B5:78 [U] 4.46 B5:105 [A] 60.91
BN:184 [ILE] B5:78 [U] 3.68 B5:105 [A] 6.79
BN:184 [ILE] B5:79 [C] 4.66 B5:104 [G] 6.79
BN:184 [ILE] B5:99 [A] 3.69 B5:84 [A] 6.79
BN:184 [ILE] B5:100 [C] 4.53 B5:83 [C] 6.79
BN:185 [GLY] B5:61 [A] 3.74 74.04
BN:185 [GLY] B5:78 [U] 2.7 B5:105 [A] 74.04
BN:185 [GLY] B5:79 [C] 3.63 B5:104 [G] 74.04
BN:186 [GLY] B5:29 [G] 4.68 B5:53 [C] 61.75
BN:186 [GLY] B5:61 [A] 2.96 61.75
BN:186 [GLY] B5:62 [A] 3.43 61.75
BN:186 [GLY] B5:78 [U] 3.95 B5:105 [A] 61.75
BN:187 [SER] B5:28 [C] 2.68 B5:54 [G] 89.72
BN:187 [SER] B5:29 [G] 3.32 B5:53 [C] 89.72
BN:187 [SER] B5:61 [A] 4.53 89.72
BN:188 [ARG] B5:29 [G] 4.69 B5:53 [C] 12.79
BN:188 [ARG] B5:30 [C] 4.28 B5:52 [G] 12.79
BN:188 [ARG] B5:298 [G] 3.3 B5:289 [C] sugar:SC 12.79
BN:188 [ARG] B5:299 [C] 3.73 B5:288 [G] sugar:SC 12.79
BN:189 [ARG] B5:28 [C] 4.24 B5:54 [G] 72.01
BN:189 [ARG] B5:29 [G] 4.33 B5:53 [C] 72.01
BN:189 [ARG] B5:30 [C] 4.25 B5:52 [G] 72.01
BN:189 [ARG] B5:31 [U] 3.94 B5:51 [A] base:SC 72.01
BN:189 [ARG] B5:32 [G] 4.71 B5:50 [C] 72.01
BN:189 [ARG] B5:48 [G] 3.65 72.01
BN:189 [ARG] B5:49 [U] 2.91 B5:33 [A] 72.01
BN:190 [ALA] B5:28 [C] 3.57 B5:54 [G] 79.29
BN:190 [ALA] B5:79 [C] 4.88 B5:104 [G] 79.29
BN:192 [TRP] B5:47 [A] 4.4 B5:34 [A] 5.18
BN:192 [TRP] B5:48 [G] 2.5 5.18
BN:192 [TRP] B5:49 [U] 3.62 B5:33 [A] 5.18
BN:193 [ARG] B5:27 [C] 2.75 B5:55 [G] 58.82
BN:193 [ARG] B5:28 [C] 2.87 B5:54 [G] 58.82
BN:194 [ARG] B5:79 [C] 3.01 B5:104 [G] 41.53
BN:194 [ARG] B5:80 [C] 3.55 B5:103 [G] 41.53
BN:194 [ARG] B5:99 [A] 3.98 B5:84 [A] 41.53
BN:195 [ARG] B5:98 [A] 3.05 B5:86 [U] 28.98
BN:195 [ARG] B5:99 [A] 3.21 B5:84 [A] 28.98
BN:196 [ASN] B5:48 [G] 4.74 64.31
BN:196 [ASN] B5:97 [G] 4.18 B5:87 [A] 64.31
BN:198 [LEU] B5:1285 [U] 4.75 B5:1470 [A] 56.7
BN:199 [GLN] B5:80 [C] 3.98 B5:103 [G] 21.92
BN:199 [GLN] B5:81 [C] 3.66 B5:102 [G] 21.92
BN:200 [LEU] B5:1285 [U] 3.8 B5:1470 [A] 70.96
BN:200 [LEU] B5:1286 [A] 4.03 B5:1469 [U] 70.96
BN:201 [HIS] B5:80 [C] 4.31 B5:103 [G] 50.77
BN:201 [HIS] B5:81 [C] 2.97 B5:102 [G] 50.77
BN:201 [HIS] B5:1303 [G] 4.74 50.77
BN:201 [HIS] B5:1304 [G] 2.84 B5:1323 [C] 50.77
BN:202 [ARG] B5:1304 [G] 4.72 B5:1323 [C] 76.57
BN:202 [ARG] B5:1315 [A] 3.49 76.57
BN:202 [ARG] B5:1316 [A] 2.52 76.57
BN:203 [TYR] B5:1303 [G] 3.7 29.64
BN:203 [TYR] B5:1304 [G] 4.28 B5:1323 [C] 29.64
BN:203 [TYR] B5:1316 [A] 4.63 29.64
BN:203 [TYR] B5:1317 [A] 3.97 29.64
BN:204 [ARG] B5:1285 [U] 3.35 B5:1470 [A] 77.69
BN:204 [ARG] B5:1286 [A] 2.64 B5:1469 [U] 77.69
BN:204 [ARG] B5:1303 [G] 4.07 77.69

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group106 7O7Y_BN_B5,B8 BN: Ribosomal protein l15, Oryctolagus cuniculus (natural) B5: 28s rRNA, Oryctolagus cuniculus (natural) B8: 5.8s rRNA, Oryctolagus cuniculus (natural) G1T0C1 Ribosomal proteins S24e, L23 and L15e Eukaryotic large subunit ribosomal RNA & 5.8S ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_L_0 7O7Y_BN_B5,B8 0.70 0.94 2.07 0.36 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_M_0 7O7Y_BN_B5,B8 0.72 0.94 2.04 0.36 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_M_0 7O7Y_BN_B5,B8 0.71 0.94 2.03 0.36 Ribosomal proteins S24e, L23 and L15e compare
3CC2_M_0 7O7Y_BN_B5,B8 0.70 0.94 2.07 0.36 Ribosomal proteins S24e, L23 and L15e compare
6AZ3_M_1,7 7O7Y_BN_B5,B8 0.81 0.93 0.85 0.54 Ribosomal proteins S24e, L23 and L15e 5.8S ribosomal RNA & Eukaryotic large subunit ribosomal RNA compare
6AZ3_M_2 7O7Y_BN_B5,B8 0.79 0.92 0.77 0.62 Ribosomal proteins S24e, L23 and L15e Eukaryotic large subunit ribosomal RNA compare