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All interfaces > All interologs > Interface groups > group108 > 1VQ8_X_0 vs 6AZ3_e_1

Interface analysis


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Common contacts -

1VQ8_X
1VQ8_0
6AZ3_e
6AZ3_1
Conserved?
X:50 [LEU] 0:1384 [C] e:122 [ILE] 1:1551 [U] ✔
X:50 [LEU] 0:1385 [G] e:122 [ILE] 1:1552 [A] ✔
X:48 [VAL] 0:1385 [G] e:120 [ASN] 1:1552 [A] ✔
X:30 [MET] 0:1383 [U] e:104 [ILE] 1:1550 [C] ✔
X:30 [MET] 0:1384 [C] e:104 [ILE] 1:1551 [U] ✔
X:51 [ASP] 0:1384 [C] e:123 [ASP] 1:1551 [U] ✔
X:60 [ALA] 0:1401 [G] e:132 [HIS] 1:1583 [U] ✔
X:59 [TRP] 0:1381 [A] e:131 [TRP] 1:1548 [A] ✔
X:59 [TRP] 0:1382 [G] e:131 [TRP] 1:1549 [U] ✔
X:59 [TRP] 0:1383 [U] e:131 [TRP] 1:1550 [C] ✔
X:59 [TRP] 0:1400 [C] e:131 [TRP] 1:1582 [A] ✔
X:59 [TRP] 0:1401 [G] e:131 [TRP] 1:1583 [U] ✔
X:56 [GLU] 0:1399 [A] e:128 [THR] 1:1581 [G] ✔
X:56 [GLU] 0:1400 [C] e:128 [THR] 1:1582 [A] ✔
X:34 [ARG] 0:1384 [C] e:108 [LYS] 1:1551 [U] ✔
X:34 [ARG] 0:1385 [G] e:108 [LYS] 1:1552 [A] ✔
X:62 [GLY] 0:1401 [G] e:134 [GLY] 1:1583 [U] ✔
X:62 [GLY] 0:1402 [G] e:134 [GLY] 1:1584 [A] ✔
X:52 [PRO] 0:1384 [C] e:124 [ALA] 1:1551 [U] ✔
X:27 [ASP] 0:1382 [G] e:101 [PRO] 1:1549 [U] ✔
X:27 [ASP] 0:1383 [U] e:101 [PRO] 1:1550 [C] ✔
X:49 [ARG] 0:1385 [G] e:121 [ARG] 1:1552 [A] ✔
X:49 [ARG] 0:1386 [G] e:121 [ARG] 1:1553 [A] ✔
X:63 [ARG] 0:1381 [A] e:135 [VAL] 1:1548 [A] ✔
X:63 [ARG] 0:1401 [G] e:135 [VAL] 1:1583 [U] ✔
X:55 [ASN] 0:1383 [U] e:127 [ASN] 1:1550 [C] ✔
X:55 [ASN] 0:1384 [C] e:127 [ASN] 1:1551 [U] ✔
X:55 [ASN] 0:1399 [A] e:127 [ASN] 1:1581 [G] ✔
X:55 [ASN] 0:1400 [C] e:127 [ASN] 1:1582 [A] ✔
X:23 [HIS] 0:1380 [U] e:97 [SER] 1:1547 [G] ❌ 6AZ3_e_1
X:52 [PRO] 0:1385 [G] e:124 [ALA] 1:1552 [A] ❌ 6AZ3_e_1
X:63 [ARG] 0:1380 [U] e:135 [VAL] 1:1547 [G] ❌ 6AZ3_e_1
X:63 [ARG] 0:1382 [G] e:135 [VAL] 1:1549 [U] ❌ 6AZ3_e_1
X:49 [ARG] 0:1384 [C] e:121 [ARG] 1:1551 [U] ❌ 1VQ8_X_0
X:51 [ASP] 0:1385 [G] e:123 [ASP] 1:1552 [A] ❌ 1VQ8_X_0
X:61 [ARG] 0:1402 [G] e:133 [LYS] 1:1584 [A] ❌ 1VQ8_X_0
X:23 [HIS] 0:1381 [A] e:97 [SER] 1:1548 [A] ❌ 1VQ8_X_0
X:52 [PRO] 0:1398 [G] e:124 [ALA] 1:1580 [G] ❌ 6AZ3_1:1580 no longer at interface
X:64 [ALA] 0:1380 [U] e:136 [LYS] 1:1547 [G] ❌ 1VQ8_X:64 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L31e/gp120 outer domain 0.75 1.28 0.05 0.88 0.76 0.47 0.55 0.79 0.72 0.25 0.20


Other pairs involving 1VQ8_X_0 or 6AZ3_e_1

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6AZ3_e_1 7O7Y_Bd_B5 0.90 0.91 0.96 0.22 Ribosomal protein L31e/gp120 outer domain Eukaryotic large subunit ribosomal RNA compare
1VQ8_X_0 1YHQ_X_0 0.99 1.0 0.21 1.0 Ribosomal protein L31e/gp120 outer domain Archaeal large subunit ribosomal RNA compare
1VQ8_X_0 7O7Y_Bd_B5 0.66 0.94 1.78 0.35 Ribosomal protein L31e/gp120 outer domain compare
1VQ8_X_0 6AZ3_e_2 0.33 0.79 2.67 0.12 Ribosomal protein L31e/gp120 outer domain compare
1VQ8_X_0 6AZ3_e_4 0.47 0.76 2.15 0.15 Ribosomal protein L31e/gp120 outer domain compare
1VQ8_X_0 6AZ3_e_1 0.79 0.75 1.28 0.05 Ribosomal protein L31e/gp120 outer domain compare
1YHQ_X_0 6AZ3_e_1 0.80 0.75 1.26 0.05 Ribosomal protein L31e/gp120 outer domain compare