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All interfaces > All interologs > Interface groups > group108 > 1VQ8_X_0 vs 6AZ3_e_4

Interface analysis


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Licorice
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Common contacts -

1VQ8_X
1VQ8_0
6AZ3_e
6AZ3_4
Conserved?
X:60 [ALA] 0:2743 [A] e:132 [HIS] 4:102 [G] ✔
X:18 [ARG] 0:2727 [A] e:92 [LYS] 4:85 [C] ✔
X:22 [ASN] 0:2726 [U] e:96 [PHE] 4:84 [U] ✔
X:22 [ASN] 0:2749 [U] e:96 [PHE] 4:107 [U] ✔
X:62 [GLY] 0:2744 [G] e:134 [GLY] 4:103 [C] ✔
X:65 [ASN] 0:2744 [G] e:137 [GLY] 4:103 [C] ✔
X:61 [ARG] 0:2743 [A] e:133 [LYS] 4:102 [G] ✔
X:61 [ARG] 0:2744 [G] e:133 [LYS] 4:103 [C] ✔
X:22 [ASN] 0:2727 [A] e:96 [PHE] 4:85 [C] ❌ 6AZ3_e_4
X:65 [ASN] 0:2745 [C] e:137 [GLY] 4:104 [A] ❌ 6AZ3_e_4
X:61 [ARG] 0:2745 [C] e:133 [LYS] 4:104 [A] ❌ 1VQ8_X_0
X:62 [GLY] 0:2745 [C] e:134 [GLY] 4:104 [A] ❌ 1VQ8_X_0
X:63 [ARG] 0:2745 [C] e:135 [VAL] 4:104 [A] ❌ 1VQ8_X_0
X:19 [ALA] 0:2726 [U] e:93 [LYS] 4:84 [U] ❌ 1VQ8_X_0
X:19 [ALA] 0:2727 [A] e:93 [LYS] 4:85 [C] ❌ 1VQ8_X_0
X:20 [GLU] 0:2726 [U] e:94 [LYS] 4:84 [U] ❌ 1VQ8_X_0
X:21 [PRO] 0:2726 [U] e:95 [THR] 4:84 [U] ❌ 1VQ8_X_0
X:25 [ARG] 0:2726 [U] e:99 [ARG] 4:84 [U] ❌ 1VQ8_X_0
X:25 [ARG] 0:2727 [A] e:99 [ARG] 4:85 [C] ❌ 1VQ8_X_0
X:25 [ARG] 0:2728 [C] e:99 [ARG] 4:87 [G] ❌ 6AZ3_4:87 no longer at interface
X:60 [ALA] 0:2742 [G] e:132 [HIS] 4:101 [G] ❌ 1VQ8_0:2742 no longer at interface
X:64 [ALA] 0:2746 [A] e:136 [LYS] 4:105 [A] ❌ 1VQ8_X:64, 1VQ8_0:2746 no longer at interface
X:64 [ALA] 0:2750 [G] e:136 [LYS] 4:108 [G] ❌ 1VQ8_X:64, 1VQ8_0:2750 no longer at interface
X:18 [ARG] 0:2756 [U] e:92 [LYS] 4:114 [A] ❌ 1VQ8_0:2756 no longer at interface
X:64 [ALA] 0:2745 [C] e:136 [LYS] 4:104 [A] ❌ 1VQ8_X:64 no longer at interface
X:64 [ALA] 0:2749 [U] e:136 [LYS] 4:107 [U] ❌ 1VQ8_X:64 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L31e/gp120 outer domain 0.76 2.15 0.15 0.88 0.79 0.85 0.55 0.47 0.50 0.10 0.39


Other pairs involving 1VQ8_X_0 or 6AZ3_e_4

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_X_0 1YHQ_X_0 0.99 1.0 0.21 1.0 Ribosomal protein L31e/gp120 outer domain Archaeal large subunit ribosomal RNA compare
1VQ8_X_0 7O7Y_Bd_B5 0.66 0.94 1.78 0.35 Ribosomal protein L31e/gp120 outer domain compare
1VQ8_X_0 6AZ3_e_2 0.33 0.79 2.67 0.12 Ribosomal protein L31e/gp120 outer domain compare
1VQ8_X_0 6AZ3_e_4 0.47 0.76 2.15 0.15 Ribosomal protein L31e/gp120 outer domain compare
1VQ8_X_0 6AZ3_e_1 0.79 0.75 1.28 0.05 Ribosomal protein L31e/gp120 outer domain compare
1YHQ_X_0 6AZ3_e_4 0.47 0.76 2.19 0.15 Ribosomal protein L31e/gp120 outer domain compare
6AZ3_e_4 7O7Y_Bd_B5 0.70 0.86 1.14 0.31 Ribosomal protein L31e/gp120 outer domain Eukaryotic large subunit ribosomal RNA compare