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All interfaces > All interologs > Interface groups > group108 > 1YHQ_X_0 vs 6AZ3_e_2

Interface analysis


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Licorice
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Licorice
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Common contacts -

1YHQ_X
1YHQ_0
6AZ3_e
6AZ3_2
Conserved?
X:24 [LYS] 0:2044 [G] e:98 [LYS] 2:592 [C] ✔
X:20 [GLU] 0:1731 [C] e:94 [LYS] 2:68 [A] ✔
X:20 [GLU] 0:2043 [U] e:94 [LYS] 2:591 [A2M] ✔
X:21 [PRO] 0:2043 [U] e:95 [THR] 2:591 [A2M] ✔
X:21 [PRO] 0:2044 [G] e:95 [THR] 2:592 [C] ✔
X:28 [LYS] 0:1728 [G] e:102 [LEU] 2:66 [A] ✔
X:28 [LYS] 0:1729 [A] e:102 [LEU] 2:67 [G] ✔
X:31 [ILE] 0:1728 [G] e:105 [LYS] 2:66 [A] ✔
X:19 [ALA] 0:1731 [C] e:93 [LYS] 2:68 [A] ❌ 6AZ3_e_2
X:21 [PRO] 0:1731 [C] e:95 [THR] 2:68 [A] ❌ 6AZ3_e_2
X:19 [ALA] 0:2042 [U] e:93 [LYS] 2:590 [U] ❌ 1YHQ_X_0
X:19 [ALA] 0:2043 [U] e:93 [LYS] 2:591 [A2M] ❌ 1YHQ_X_0
X:20 [GLU] 0:1729 [A] e:94 [LYS] 2:67 [G] ❌ 1YHQ_X_0
X:24 [LYS] 0:1729 [A] e:98 [LYS] 2:67 [G] ❌ 1YHQ_X_0
X:31 [ILE] 0:1727 [G] e:105 [LYS] 2:65 [G] ❌ 1YHQ_0:1727 no longer at interface
X:19 [ALA] 0:2041 [G] e:93 [LYS] 2:589 [U] ❌ 1YHQ_0:2041 no longer at interface
X:23 [HIS] 0:2043 [U] e:97 [SER] 2:591 [A2M] ❌ 6AZ3_e:97 no longer at interface
X:23 [HIS] 0:2044 [G] e:97 [SER] 2:592 [C] ❌ 6AZ3_e:97 no longer at interface
X:22 [ASN] 0:2042 [U] e:96 [PHE] 2:590 [U] ❌ 6AZ3_e:96 no longer at interface
X:22 [ASN] 0:2043 [U] e:96 [PHE] 2:591 [A2M] ❌ 6AZ3_e:96 no longer at interface
X:32 [LEU] 0:1729 [A] e:106 [ARG] 2:67 [G] ❌ 1YHQ_X:32 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L31e/gp120 outer domain 0.79 2.69 0.12 0.89 0.81 0.86 0.75 0.34 0.25 0.11 0.54


Other pairs involving 1YHQ_X_0 or 6AZ3_e_2

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_X_0 1YHQ_X_0 0.99 1.0 0.21 1.0 Ribosomal protein L31e/gp120 outer domain Archaeal large subunit ribosomal RNA compare
1VQ8_X_0 6AZ3_e_2 0.33 0.79 2.67 0.12 Ribosomal protein L31e/gp120 outer domain compare
1YHQ_X_0 6AZ3_e_1 0.80 0.75 1.26 0.05 Ribosomal protein L31e/gp120 outer domain compare
1YHQ_X_0 6AZ3_e_4 0.47 0.76 2.19 0.15 Ribosomal protein L31e/gp120 outer domain compare
1YHQ_X_0 7O7Y_Bd_B5 0.64 0.94 1.83 0.35 Ribosomal protein L31e/gp120 outer domain compare
1YHQ_X_0 6AZ3_e_2 0.34 0.79 2.69 0.12 Ribosomal protein L31e/gp120 outer domain compare
6AZ3_e_2 7O7Y_Bd_B5 0.31 0.9 1.17 0.25 Ribosomal protein L31e/gp120 outer domain Eukaryotic large subunit ribosomal RNA compare