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All interfaces > All interologs > Interface groups > group108 > 6AZ3_e_1 vs 7O7Y_Bd_B5

Interface analysis


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Common contacts -

6AZ3_e
6AZ3_1
7O7Y_Bd
7O7Y_B5
Conserved?
e:134 [GLY] 1:1583 [U] Bd:76 [GLY] B5:2233 [G] ✔
e:134 [GLY] 1:1584 [A] Bd:76 [GLY] B5:2234 [G] ✔
e:121 [ARG] 1:1552 [A] Bd:63 [ARG] B5:2217 [A] ✔
e:121 [ARG] 1:1553 [A] Bd:63 [ARG] B5:2218 [A] ✔
e:127 [ASN] 1:1550 [C] Bd:69 [ASN] B5:2215 [U] ✔
e:127 [ASN] 1:1551 [U] Bd:69 [ASN] B5:2216 [C] ✔
e:127 [ASN] 1:1581 [G] Bd:69 [ASN] B5:2231 [A] ✔
e:127 [ASN] 1:1582 [A] Bd:69 [ASN] B5:2232 [A] ✔
e:135 [VAL] 1:1548 [A] Bd:77 [ILE] B5:2213 [A] ✔
e:135 [VAL] 1:1583 [U] Bd:77 [ILE] B5:2233 [G] ✔
e:123 [ASP] 1:1551 [U] Bd:65 [ASP] B5:2216 [C] ✔
e:104 [ILE] 1:1550 [C] Bd:46 [LEU] B5:2215 [U] ✔
e:104 [ILE] 1:1551 [U] Bd:46 [LEU] B5:2216 [C] ✔
e:101 [PRO] 1:1549 [U] Bd:43 [PRO] B5:2214 [U] ✔
e:101 [PRO] 1:1550 [C] Bd:43 [PRO] B5:2215 [U] ✔
e:108 [LYS] 1:1551 [U] Bd:50 [ARG] B5:2216 [C] ✔
e:108 [LYS] 1:1552 [A] Bd:50 [ARG] B5:2217 [A] ✔
e:132 [HIS] 1:1583 [U] Bd:74 [ALA] B5:2233 [G] ✔
e:131 [TRP] 1:1548 [A] Bd:73 [TRP] B5:2213 [A] ✔
e:131 [TRP] 1:1549 [U] Bd:73 [TRP] B5:2214 [U] ✔
e:131 [TRP] 1:1550 [C] Bd:73 [TRP] B5:2215 [U] ✔
e:131 [TRP] 1:1582 [A] Bd:73 [TRP] B5:2232 [A] ✔
e:131 [TRP] 1:1583 [U] Bd:73 [TRP] B5:2233 [G] ✔
e:97 [SER] 1:1548 [A] Bd:39 [LYS] B5:2213 [A] ✔
e:122 [ILE] 1:1551 [U] Bd:64 [ILE] B5:2216 [C] ✔
e:122 [ILE] 1:1552 [A] Bd:64 [ILE] B5:2217 [A] ✔
e:128 [THR] 1:1581 [G] Bd:70 [LYS] B5:2231 [A] ✔
e:128 [THR] 1:1582 [A] Bd:70 [LYS] B5:2232 [A] ✔
e:124 [ALA] 1:1551 [U] Bd:66 [THR] B5:2216 [C] ✔
e:120 [ASN] 1:1552 [A] Bd:62 [VAL] B5:2217 [A] ✔
e:136 [LYS] 1:1547 [G] Bd:78 [ARG] B5:2212 [U] ❌ 7O7Y_Bd_B5
e:121 [ARG] 1:1551 [U] Bd:63 [ARG] B5:2216 [C] ❌ 7O7Y_Bd_B5
e:123 [ASP] 1:1552 [A] Bd:65 [ASP] B5:2217 [A] ❌ 7O7Y_Bd_B5
e:133 [LYS] 1:1584 [A] Bd:75 [LYS] B5:2234 [G] ❌ 7O7Y_Bd_B5
e:97 [SER] 1:1547 [G] Bd:39 [LYS] B5:2212 [U] ❌ 6AZ3_e_1
e:124 [ALA] 1:1552 [A] Bd:66 [THR] B5:2217 [A] ❌ 6AZ3_e_1
e:135 [VAL] 1:1549 [U] Bd:77 [ILE] B5:2214 [U] ❌ 6AZ3_e_1
e:124 [ALA] 1:1580 [G] Bd:66 [THR] B5:2230 [G] ❌ 6AZ3_1:1580 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L31e/gp120 outer domain Eukaryotic large subunit ribosomal RNA 0.91 0.96 0.22 0.92 0.91 0.47 0.55 0.90 0.88 0.56 0.12


Other pairs involving 6AZ3_e_1 or 7O7Y_Bd_B5

Total number of entries: 8

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_X_0 6AZ3_e_1 0.79 0.75 1.28 0.05 Ribosomal protein L31e/gp120 outer domain compare
1YHQ_X_0 6AZ3_e_1 0.80 0.75 1.26 0.05 Ribosomal protein L31e/gp120 outer domain compare
6AZ3_e_1 7O7Y_Bd_B5 0.90 0.91 0.96 0.22 Ribosomal protein L31e/gp120 outer domain Eukaryotic large subunit ribosomal RNA compare
6AZ3_e_4 7O7Y_Bd_B5 0.70 0.86 1.14 0.31 Ribosomal protein L31e/gp120 outer domain Eukaryotic large subunit ribosomal RNA compare
1VQ8_X_0 7O7Y_Bd_B5 0.66 0.94 1.78 0.35 Ribosomal protein L31e/gp120 outer domain compare
1YHQ_X_0 7O7Y_Bd_B5 0.64 0.94 1.83 0.35 Ribosomal protein L31e/gp120 outer domain compare
6AZ3_e_5 7O7Y_Bd_B5 0.79 0.88 0.83 0.12 Ribosomal protein L31e/gp120 outer domain compare
6AZ3_e_2 7O7Y_Bd_B5 0.31 0.9 1.17 0.25 Ribosomal protein L31e/gp120 outer domain Eukaryotic large subunit ribosomal RNA compare