RNAprotDB

Interface analysis

6AZ3_e	6AZ3_2	7O7Y_Bd	7O7Y_B5	Conserved?
e:95 [THR]	2:591 [A2M]	Bd:37 [GLY]	B5:3581 [A]	✔
e:102 [LEU]	2:67 [G]	Bd:44 [ARG]	B5:2676 [A]	✔
e:105 [LYS]	2:65 [G]	Bd:47 [LYS]	B5:2674 [G]	✔
e:105 [LYS]	2:66 [A]	Bd:47 [LYS]	B5:2675 [A]	✔
e:98 [LYS]	2:67 [G]	Bd:40 [LYS]	B5:2676 [A]	❌ 7O7Y_Bd_B5
e:94 [LYS]	2:67 [G]	Bd:36 [VAL]	B5:2676 [A]	❌ 7O7Y_Bd_B5
e:94 [LYS]	2:591 [A2M]	Bd:36 [VAL]	B5:3581 [A]	❌ 7O7Y_Bd_B5
e:93 [LYS]	2:591 [A2M]	Bd:35 [GLY]	B5:3581 [A]	❌ 7O7Y_Bd_B5
e:102 [LEU]	2:66 [A]	Bd:44 [ARG]	B5:2675 [A]	❌ 7O7Y_Bd_B5
e:98 [LYS]	2:65 [G]	Bd:40 [LYS]	B5:2674 [G]	❌ 6AZ3_e_2
e:95 [THR]	2:592 [C]	Bd:37 [GLY]	B5:3582 [C]	❌ 7O7Y_B5:3582 no longer at interface
e:98 [LYS]	2:592 [C]	Bd:40 [LYS]	B5:3582 [C]	❌ 7O7Y_B5:3582 no longer at interface
e:94 [LYS]	2:68 [A]	Bd:36 [VAL]	B5:2677 [C]	❌ 7O7Y_B5:2677 no longer at interface
e:93 [LYS]	2:589 [U]	Bd:35 [GLY]	B5:3579 [C]	❌ 7O7Y_B5:3579 no longer at interface
e:93 [LYS]	2:590 [U]	Bd:35 [GLY]	B5:3580 [U]	❌ 7O7Y_B5:3580 no longer at interface
e:106 [ARG]	2:67 [G]	Bd:48 [GLU]	B5:2676 [A]	❌ 7O7Y_Bd:48 no longer at interface
e:96 [PHE]	2:591 [A2M]	Bd:38 [PHE]	B5:3581 [A]	❌ 6AZ3_e:96 no longer at interface

Export the table of contacts

Common ECOD label(s)	Common RFAM label(s)	Interface TM-score	Interface RMSD	Percentage identity	Protein TM-score	RNA TM-score	Protein coverage	RNA coverage	Percentage conservation	Apolar conservation	H-bond conservation	Percentage switching out
Ribosomal protein L31e/gp120 outer domain	Eukaryotic large subunit ribosomal RNA	0.9	1.17	0.25	0.92	0.9	0.86	0.5	0.31	0.00	0.12	0.54

Other pairs involving 6AZ3_e_2 or 7O7Y_Bd_B5

Interface 1	Interface 2	Percentage conservation	Interface TM-score	Interface RMSD	Percentage identity	Common ECOD label(s)	Common RFAM label(s)	Explore both interfaces
6AZ3_e_1	7O7Y_Bd_B5	0.90	0.91	0.96	0.22	Ribosomal protein L31e/gp120 outer domain	Eukaryotic large subunit ribosomal RNA	compare
6AZ3_e_4	7O7Y_Bd_B5	0.70	0.86	1.14	0.31	Ribosomal protein L31e/gp120 outer domain	Eukaryotic large subunit ribosomal RNA	compare
1VQ8_X_0	7O7Y_Bd_B5	0.66	0.94	1.78	0.35	Ribosomal protein L31e/gp120 outer domain		compare
1VQ8_X_0	6AZ3_e_2	0.33	0.79	2.67	0.12	Ribosomal protein L31e/gp120 outer domain		compare
1YHQ_X_0	7O7Y_Bd_B5	0.64	0.94	1.83	0.35	Ribosomal protein L31e/gp120 outer domain		compare
1YHQ_X_0	6AZ3_e_2	0.34	0.79	2.69	0.12	Ribosomal protein L31e/gp120 outer domain		compare
6AZ3_e_5	7O7Y_Bd_B5	0.79	0.88	0.83	0.12	Ribosomal protein L31e/gp120 outer domain		compare
6AZ3_e_2	7O7Y_Bd_B5	0.31	0.9	1.17	0.25	Ribosomal protein L31e/gp120 outer domain	Eukaryotic large subunit ribosomal RNA	compare

Interface 1

Interface 2

Percentage conservation

Interface TM-score

Interface RMSD

Percentage identity

Common ECOD label(s)

Common RFAM label(s)

Explore both interfaces

0.90