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All interfaces > All interologs > Interface groups > group109 > 1ZBL_A_C

Interface analysis

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Protein

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Interface

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Rim - Core

Contacts -

1ZBL_A
1ZBL_C
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:71 [ASP] C:4 [A] 4.53 D:21 [DT] 98.73
A:71 [ASP] C:5 [C] 3.07 D:20 [DG] 98.73
A:72 [VAL] C:5 [C] 3.58 D:20 [DG] 93.82
A:72 [VAL] C:6 [C] 4.22 D:19 [DG] 93.82
A:73 [GLY] C:5 [C] 4.35 D:20 [DG] 90.23
A:73 [GLY] C:6 [C] 3.53 D:19 [DG] 90.23
A:74 [SER] C:5 [C] 2.62 D:20 [DG] sugar:SC 79.52
A:74 [SER] C:6 [C] 2.74 D:19 [DG] 79.52
A:74 [SER] C:7 [U] 4.48 D:18 [DA] 79.52
A:75 [GLN] C:6 [C] 3.54 D:19 [DG] 79.28
A:75 [GLN] C:7 [U] 3.04 D:18 [DA] 79.28
A:76 [GLY] C:5 [C] 4.08 D:20 [DG] 71.04
A:76 [GLY] C:6 [C] 2.54 D:19 [DG] sugar:BB 71.04
A:76 [GLY] C:7 [U] 4.06 D:18 [DA] 71.04
A:77 [ASN] C:4 [A] 4.81 D:21 [DT] 83.76
A:77 [ASN] C:5 [C] 3.68 D:20 [DG] 83.76
A:77 [ASN] C:6 [C] 4.01 D:19 [DG] 83.76
A:105 [ASN] C:4 [A] 3.38 D:21 [DT] base:SC 94.09
A:105 [ASN] C:5 [C] 3.28 D:20 [DG] 94.09
A:106 [ASN] C:4 [A] 4.64 D:21 [DT] 96.94
A:109 [GLU] C:4 [A] 2.87 D:21 [DT] sugar:SC 98.61
A:109 [GLU] C:5 [C] 3.77 D:20 [DG] 98.61
A:132 [ASP] C:3 [C] 2.7 D:22 [DG] sugar:BB 98.76
A:132 [ASP] C:4 [A] 2.86 D:21 [DT] 98.76
A:132 [ASP] C:5 [C] 3.8 D:20 [DG] 98.76
A:133 [SER] C:3 [C] 3.85 D:22 [DG] 99.0
A:133 [SER] C:4 [A] 4.75 D:21 [DT] 99.0
A:134 [GLN] C:2 [A] 3.13 D:23 [DT] base:SC, sugar:SC 44.77
A:134 [GLN] C:3 [C] 3.04 D:22 [DG] sugar:BB 44.77
A:135 [THR] C:3 [C] 4.71 D:22 [DG] 78.35
A:180 [LYS] C:3 [C] 2.66 D:22 [DG] 92.0
A:180 [LYS] C:4 [A] 2.83 D:21 [DT] 92.0
A:181 [TRP] C:4 [A] 4.0 D:21 [DT] 95.23
A:183 [THR] C:4 [A] 2.61 D:21 [DT] 95.47
A:184 [ASP] C:3 [C] 4.8 D:22 [DG] 33.49
A:192 [ASN] C:5 [C] 4.15 D:20 [DG] 97.83
A:192 [ASN] C:6 [C] 4.76 D:19 [DG] 97.83
A:193 [TYR] C:6 [C] 4.41 D:19 [DG] 78.02

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group109 1ZBL_A_C A: Ribonuclease h-related protein, Bacillus halodurans (genetically engineered) C: N/A Q9KEI9 Ribonuclease H-like ✘

Interologs

Total number of interologs for this interface: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1ZBI_A_C 1ZBL_A_C 0.97 0.95 0.23 0.17 Ribonuclease H-like compare
1ZBL_A_C 5VAJ_B_C 0.97 0.97 0.36 0.85 Ribonuclease H-like compare
1ZBL_A_C 6VRD_A_B 0.92 0.67 1.41 0.17 Ribonuclease H-like compare
1ZBL_A_C 2QKB_A_C 0.92 0.67 2.33 0.25 Ribonuclease H-like compare
1ZBL_A_C 4H8K_A_C 0.93 0.65 1.52 0.4 Ribonuclease H-like compare
1ZBL_A_C 6BSG_A_R 0.55 0.61 2.22 0.0 Ribonuclease H-like compare