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All interfaces > All interologs > Interface groups > group109 > 4H8K_A_C vs 5VAJ_B_C

Interface analysis


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Common contacts -

4H8K_A
4H8K_C
5VAJ_B
5VAJ_C
Conserved?
A:77 [ASN] C:4 [C] B:132 [ASN] C:3 [C] ✔
A:77 [ASN] C:5 [A] B:132 [ASN] C:4 [A] ✔
A:77 [ASN] C:6 [C] B:132 [ASN] C:5 [C] ✔
A:119 [ILE] C:5 [A] B:181 [TRP] C:4 [A] ✔
A:15 [ASN] C:5 [A] B:77 [ASN] C:4 [A] ✔
A:15 [ASN] C:6 [C] B:77 [ASN] C:5 [C] ✔
A:15 [ASN] C:7 [C] B:77 [ASN] C:6 [C] ✔
A:12 [ALA] C:6 [C] B:74 [SER] C:5 [C] ✔
A:12 [ALA] C:7 [C] B:74 [SER] C:6 [C] ✔
A:121 [ARG] C:5 [A] B:183 [THR] C:4 [A] ✔
A:10 [GLY] C:6 [C] B:72 [VAL] C:5 [C] ✔
A:10 [GLY] C:7 [C] B:72 [VAL] C:6 [C] ✔
A:78 [SER] C:4 [C] B:133 [SER] C:3 [C] ✔
A:78 [SER] C:5 [A] B:133 [SER] C:4 [A] ✔
A:128 [ASP] C:6 [C] B:192 [ASP] C:5 [C] ✔
A:11 [GLY] C:6 [C] B:73 [GLY] C:5 [C] ✔
A:11 [GLY] C:7 [C] B:73 [GLY] C:6 [C] ✔
A:13 [ARG] C:7 [C] B:75 [GLN] C:6 [C] ✔
A:13 [ARG] C:8 [U] B:75 [GLN] C:7 [U] ✔
A:80 [LEU] C:4 [C] B:135 [THR] C:3 [C] ✔
A:79 [GLU] C:3 [A] B:134 [GLN] C:2 [A] ✔
A:79 [GLU] C:4 [C] B:134 [GLN] C:3 [C] ✔
A:46 [ASN] C:5 [A] B:106 [ASN] C:4 [A] ✔
A:45 [ASN] C:5 [A] B:105 [ASN] C:4 [A] ✔
A:45 [ASN] C:6 [C] B:105 [ASN] C:5 [C] ✔
A:9 [ASP] C:6 [C] B:71 [ASP] C:5 [C] ✔
A:49 [GLU] C:5 [A] B:109 [GLU] C:4 [A] ✔
A:49 [GLU] C:6 [C] B:109 [GLU] C:5 [C] ✔
A:118 [HIS] C:4 [C] B:180 [LYS] C:3 [C] ✔
A:118 [HIS] C:5 [A] B:180 [LYS] C:4 [A] ✔
A:14 [GLY] C:7 [C] B:76 [GLY] C:6 [C] ✔
A:14 [GLY] C:8 [U] B:76 [GLY] C:7 [U] ✔
A:121 [ARG] C:6 [C] B:183 [THR] C:5 [C] ❌ 5VAJ_B_C
A:13 [ARG] C:6 [C] B:75 [GLN] C:5 [C] ❌ 5VAJ_B_C
A:121 [ARG] C:4 [C] B:183 [THR] C:3 [C] ❌ 4H8K_A_C
A:9 [ASP] C:5 [A] B:71 [ASP] C:4 [A] ❌ 4H8K_A_C
A:12 [ALA] C:8 [U] B:74 [SER] C:7 [U] ❌ 4H8K_A_C
A:14 [GLY] C:6 [C] B:76 [GLY] C:5 [C] ❌ 4H8K_A_C
A:89 [TYR] C:3 [A] B:143 [LYS] C:2 [A] ❌ 5VAJ_B:143 no longer at interface
A:120 [PRO] C:5 [A] B:182 [GLN] C:4 [A] ❌ 5VAJ_B:182 no longer at interface
A:132 [ASN] C:7 [C] B:194 [GLY] C:6 [C] ❌ 5VAJ_B:194 no longer at interface
A:83 [ARG] C:3 [A] B:138 [LYS] C:2 [A] ❌ 5VAJ_B:138 no longer at interface
A:123 [LYS] C:6 [C] B:188 [GLU] C:5 [C] ❌ 4H8K_A:123 no longer at interface
A:124 [ASN] C:6 [C] B:189 [ILE] C:5 [C] ❌ 4H8K_A:124 no longer at interface
A:129 [GLU] C:7 [C] B:193 [TYR] C:6 [C] ❌ 4H8K_A:129 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like 0.63 1.53 0.48 0.61 0.3 0.86 1.0 0.92 0.84 0.47 0.54


Other pairs involving 4H8K_A_C or 5VAJ_B_C

Total number of entries: 11

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1ZBI_A_C 4H8K_A_C 0.90 0.63 1.41 0.17 Ribonuclease H-like compare
1ZBL_A_C 4H8K_A_C 0.93 0.65 1.52 0.4 Ribonuclease H-like compare
2QKB_A_C 4H8K_A_C 0.95 0.79 0.79 0.48 Ribonuclease H-like compare
1ZBI_A_C 5VAJ_B_C 0.98 0.95 0.24 0.17 Ribonuclease H-like compare
4H8K_A_C 5VAJ_B_C 0.92 0.63 1.53 0.48 Ribonuclease H-like compare
1ZBL_A_C 5VAJ_B_C 0.97 0.97 0.36 0.85 Ribonuclease H-like compare
2QKB_A_C 5VAJ_B_C 0.89 0.66 1.51 0.33 Ribonuclease H-like compare
5VAJ_B_C 6BSG_A_R 0.57 0.61 1.5 0.0 Ribonuclease H-like compare
4H8K_A_C 6BSG_A_R 0.63 0.7 0.75 0.0 Ribonuclease H-like compare
5VAJ_B_C 6VRD_A_B 0.91 0.65 1.27 0.17 Ribonuclease H-like compare
4H8K_A_C 6VRD_A_B 0.94 0.76 1.42 0.17 Ribonuclease H-like compare