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All interfaces > All interologs > Interface groups > group109 > 6BSG_A_R vs 6VRD_A_B

Interface analysis


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Common contacts -

6BSG_A
6BSG_R
6VRD_A
6VRD_B
Conserved?
A:498 [ASP] R:23 [G] A:210 [ASN] B:13 [G] ✔
A:498 [ASP] R:24 [C] A:210 [ASN] B:14 [A] ✔
A:498 [ASP] R:25 [A] A:210 [ASN] B:15 [G] ✔
A:537 [PRO] R:24 [C] A:262 [PRO] B:14 [A] ✔
A:448 [ARG] R:25 [A] A:151 [ASN] B:15 [G] ✔
A:448 [ARG] R:26 [U] A:151 [ASN] B:16 [U] ✔
A:478 [GLU] R:24 [C] A:186 [GLU] B:14 [A] ✔
A:499 [SER] R:23 [G] A:211 [SER] B:13 [G] ✔
A:499 [SER] R:24 [C] A:211 [SER] B:14 [A] ✔
A:536 [VAL] R:24 [C] A:261 [VAL] B:14 [A] ✔
A:446 [ALA] R:25 [A] A:148 [CYS] B:15 [G] ✔
A:474 [ASN] R:23 [G] A:182 [ASN] B:13 [G] ✔
A:474 [ASN] R:24 [C] A:182 [ASN] B:14 [A] ✔
A:474 [ASN] R:25 [A] A:182 [ASN] B:15 [G] ✔
A:501 [TYR] R:23 [G] A:213 [PHE] B:13 [G] ✔
A:538 [ALA] R:24 [C] A:263 [GLY] B:14 [A] ✔
A:535 [TRP] R:23 [G] A:260 [HIS] B:13 [G] ✔
A:535 [TRP] R:24 [C] A:260 [HIS] B:14 [A] ✔
A:475 [GLN] R:23 [G] A:183 [GLN] B:13 [G] ✔
A:475 [GLN] R:24 [C] A:183 [GLN] B:14 [A] ✔
A:500 [GLN] R:22 [G] A:212 [MET] B:12 [U] ✔
A:500 [GLN] R:23 [G] A:212 [MET] B:13 [G] ✔
A:537 [PRO] R:23 [G] A:262 [PRO] B:13 [G] ❌ 6VRD_A_B
A:501 [TYR] R:22 [G] A:213 [PHE] B:12 [U] ❌ 6VRD_A_B
A:538 [ALA] R:25 [A] A:263 [GLY] B:15 [G] ❌ 6VRD_A_B
A:475 [GLN] R:22 [G] A:183 [GLN] B:12 [U] ❌ 6VRD_A_B
A:446 [ALA] R:26 [U] A:148 [CYS] B:16 [U] ❌ 6BSG_A_R
A:448 [ARG] R:24 [C] A:151 [ASN] B:14 [A] ❌ 6BSG_A_R
A:478 [GLU] R:25 [A] A:186 [GLU] B:15 [G] ❌ 6BSG_A_R
A:549 [ASP] R:25 [A] A:274 [ASP] B:15 [G] ❌ 6VRD_A:274 no longer at interface
A:557 [ARG] R:25 [A] A:282 [LYS] B:15 [G] ❌ 6VRD_A:282 no longer at interface
A:557 [ARG] R:26 [U] A:282 [LYS] B:16 [U] ❌ 6VRD_A:282 no longer at interface
A:539 [HIS] R:24 [C] A:264 [HIS] B:14 [A] ❌ 6VRD_A:264 no longer at interface
A:539 [HIS] R:25 [A] A:264 [HIS] B:15 [G] ❌ 6VRD_A:264 no longer at interface
A:443 [ASP] R:25 [A] A:145 [ASP] B:15 [G] ❌ 6BSG_A:443 no longer at interface
A:444 [GLY] R:25 [A] A:146 [GLY] B:15 [G] ❌ 6BSG_A:444 no longer at interface
A:445 [ALA] R:26 [U] A:147 [CYS] B:16 [U] ❌ 6BSG_A:445 no longer at interface
A:445 [ALA] R:25 [A] A:147 [CYS] B:15 [G] ❌ 6BSG_A:445 no longer at interface
A:447 [SER] R:26 [U] A:149 [SER] B:16 [U] ❌ 6BSG_A:447 no longer at interface
A:447 [SER] R:25 [A] A:149 [SER] B:15 [G] ❌ 6BSG_A:447 no longer at interface
A:449 [GLU] R:26 [U] A:153 [ARG] B:16 [U] ❌ 6BSG_A:449 no longer at interface
A:504 [GLY] R:22 [G] A:216 [ASN] B:12 [U] ❌ 6BSG_A:504 no longer at interface
A:553 [SER] R:26 [U] A:278 [ARG] B:16 [U] ❌ 6BSG_A:553 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like 0.71 1.55 0.25 0.72 0.28 0.59 0.88 0.59 0.40 0.40 0.67


Other pairs involving 6BSG_A_R or 6VRD_A_B

Total number of entries: 11

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
5VAJ_B_C 6VRD_A_B 0.91 0.65 1.27 0.17 Ribonuclease H-like compare
5VAJ_B_C 6BSG_A_R 0.57 0.61 1.5 0.0 Ribonuclease H-like compare
1ZBI_A_C 6BSG_A_R 0.52 0.62 2.08 0.23 Ribonuclease H-like compare
1ZBI_A_C 6VRD_A_B 0.92 0.65 1.28 0.27 Ribonuclease H-like compare
4H8K_A_C 6VRD_A_B 0.94 0.76 1.42 0.17 Ribonuclease H-like compare
4H8K_A_C 6BSG_A_R 0.63 0.7 0.75 0.0 Ribonuclease H-like compare
1ZBL_A_C 6VRD_A_B 0.92 0.67 1.41 0.17 Ribonuclease H-like compare
1ZBL_A_C 6BSG_A_R 0.55 0.61 2.22 0.0 Ribonuclease H-like compare
6BSG_A_R 6VRD_A_B 0.59 0.71 1.55 0.25 Ribonuclease H-like compare
2QKB_A_C 6VRD_A_B 0.94 0.93 1.17 0.17 Ribonuclease H-like compare
2QKB_A_C 6BSG_A_R 0.56 0.7 1.02 0.0 Ribonuclease H-like compare