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All interfaces > All interologs > Interface groups > group11 > 3X1L_H_I

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Licorice
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RNA

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Licorice
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Chain
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Hydrophobicity
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Conservation*

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Rim - Core

Contacts -

3X1L_H
3X1L_I
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
H:110 [VAL] I:28 [C] 4.39 J:12 [DG] 83.87
H:111 [VAL] I:28 [C] 3.96 J:12 [DG] 82.4
H:112 [GLY] I:27 [G] 3.25 J:13 [DC] 95.51
H:112 [GLY] I:28 [C] 3.34 J:12 [DG] 95.51
H:113 [LEU] I:27 [G] 3.38 J:13 [DC] 85.82
H:113 [LEU] I:28 [C] 2.99 J:12 [DG] 85.82
H:113 [LEU] I:30 [G] 4.8 J:10 [DC] 85.82
H:114 [GLY] I:27 [G] 2.99 J:13 [DC] sugar:BB 96.34
H:114 [GLY] I:28 [C] 3.22 J:12 [DG] 96.34
H:115 [ASP] I:27 [G] 3.07 J:13 [DC] 57.6
H:116 [GLU] I:27 [G] 4.62 J:13 [DC] 66.48
H:124 [ARG] I:27 [G] 4.12 J:13 [DC] 82.49
H:135 [PRO] I:27 [G] 4.21 J:13 [DC] 96.84
H:137 [SER] I:26 [U] 3.6 94.92
H:137 [SER] I:27 [G] 2.54 J:13 [DC] 94.92
H:138 [ALA] I:26 [U] 3.52 89.31
H:138 [ALA] I:27 [G] 3.69 J:13 [DC] 89.31
H:140 [LYS] I:24 [C] 3.35 J:16 [DG] 99.0
H:140 [LYS] I:25 [U] 2.75 J:15 [DA] 99.0
H:141 [GLY] I:26 [U] 3.23 98.88
H:142 [VAL] I:26 [U] 3.7 74.44
H:144 [LYS] I:24 [C] 3.43 J:16 [DG] 88.98
H:144 [LYS] I:25 [U] 3.16 J:15 [DA] 88.98
H:144 [LYS] I:26 [U] 4.51 88.98
H:145 [HIS] I:26 [U] 2.94 78.93
H:197 [GLN] I:26 [U] 4.47 52.48
H:201 [GLU] I:24 [C] 2.48 J:16 [DG] sugar:SC 45.7
H:201 [GLU] I:25 [U] 3.21 J:15 [DA] 45.7
H:201 [GLU] I:26 [U] 4.59 45.7
H:231 [PHE] I:24 [C] 3.44 J:16 [DG] 96.25
H:231 [PHE] I:25 [U] 3.96 J:15 [DA] 96.25
H:232 [GLY] I:24 [C] 3.7 J:16 [DG] 97.85
H:233 [THR] I:23 [C] 2.54 J:17 [DG] sugar:BB 70.97
H:233 [THR] I:24 [C] 3.21 J:16 [DG] 70.97
H:234 [GLN] I:23 [C] 3.78 J:17 [DG] 59.7
H:234 [GLN] I:24 [C] 3.46 J:16 [DG] 59.7
H:235 [LYS] I:23 [C] 4.47 J:17 [DG] 50.24
H:236 [GLU] I:23 [C] 3.86 J:17 [DG] 52.82
H:236 [GLU] I:24 [C] 4.32 J:16 [DG] 52.82
H:237 [GLU] I:23 [C] 3.36 J:17 [DG] 68.47
H:237 [GLU] I:24 [C] 3.65 J:16 [DG] 68.47
H:238 [GLY] I:23 [C] 4.07 J:17 [DG] 97.94
H:238 [GLY] I:24 [C] 2.92 J:16 [DG] 97.94
H:263 [MET] I:30 [G] 3.78 J:10 [DC] 90.46
H:324 [PHE] I:26 [U] 4.09 57.18
H:325 [GLY] I:26 [U] 4.75 98.53
H:326 [VAL] I:26 [U] 3.62 83.79
H:327 [GLY] I:26 [U] 4.3 98.88
H:327 [GLY] I:28 [C] 3.32 J:12 [DG] 98.88
H:327 [GLY] I:29 [G] 4.53 J:11 [DC] 98.88
H:328 [ALA] I:28 [C] 3.35 J:12 [DG] 96.52
H:328 [ALA] I:29 [G] 3.4 J:11 [DC] 96.52
H:329 [LYS] I:28 [C] 4.79 J:12 [DG] 98.85
H:329 [LYS] I:29 [G] 2.75 J:11 [DC] 98.85
H:329 [LYS] I:30 [G] 3.77 J:10 [DC] 98.85
H:330 [THR] I:29 [G] 3.28 J:11 [DC] 97.7
H:331 [SER] I:29 [G] 4.71 J:11 [DC] 86.53
H:331 [SER] I:30 [G] 3.78 J:10 [DC] 86.53

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group11 3X1L_H_I H: Cmr6, Archaeoglobus fulgidus dsm 4304 (genetically engineered) I: RNA (32-mer), Pyrococcus furiosus com1 (synthetic) O28418 CRISPR-associated protein Cas7/Csa2-related ✘

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
3X1L_H_I 6S8B_I_U,V 0.95 0.64 0.97 0.12 compare