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All interfaces > All interologs > Interface groups > group11 > 6S8B_I_U,V

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Licorice
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Licorice
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Chain
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Hydrophobicity
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Conservation*

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Contacts -

6S8B_I
6S8B_U,V
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
I:33 [TYR] U:11 [G] 4.86 66.27
I:33 [TYR] U:12 [G] 3.93 V:82 [C] 66.27
I:60 [LEU] U:8 [U] 4.96 V:86 [A] 59.68
I:67 [LYS] U:9 [C] 4.05 V:85 [G] 12.23
I:71 [GLU] U:9 [C] 4.66 V:85 [G] 41.94
I:74 [ASN] U:11 [G] 2.79 sugar:SC base/AA stacks 42.27
I:77 [LYS] U:11 [G] 3.54 sugar:SC 81.66
I:77 [LYS] U:12 [G] 2.46 V:82 [C] 81.66
I:78 [ARG] U:11 [G] 4.82 75.23
I:78 [ARG] V:84 [A] 4.42 U:10 [U] 75.23
I:125 [LEU] V:79 [A] 4.57 U:15 [U] 73.19
I:126 [ILE] V:79 [A] 3.88 U:15 [U] 80.9
I:127 [GLY] V:78 [G] 3.27 U:16 [C] 93.39
I:127 [GLY] V:79 [A] 2.95 U:15 [U] 93.39
I:128 [VAL] V:78 [G] 3.39 U:16 [C] 76.61
I:128 [VAL] V:79 [A] 3.53 U:15 [U] 76.61
I:129 [SER] V:78 [G] 3.38 U:16 [C] sugar:BB 89.27
I:129 [SER] V:79 [A] 2.99 U:15 [U] base:SC, base:SC 89.27
I:129 [SER] V:80 [A] 4.83 U:14 [U] 89.27
I:130 [THR] V:78 [G] 4.29 U:16 [C] 72.69
I:136 [ILE] U:12 [G] 4.96 V:82 [C] 73.52
I:137 [PHE] U:12 [G] 4.41 V:82 [C] 77.77
I:138 [GLY] U:12 [G] 3.87 V:82 [C] 92.02
I:139 [SER] U:12 [G] 4.91 V:82 [C] 81.08
I:153 [PRO] V:78 [G] 4.0 U:16 [C] 96.88
I:155 [SER] V:77 [G] 3.54 96.04
I:155 [SER] V:78 [G] 2.34 U:16 [C] 96.04
I:156 [GLU] V:77 [G] 3.23 90.87
I:156 [GLU] V:78 [G] 3.08 U:16 [C] 90.87
I:156 [GLU] V:79 [A] 2.61 U:15 [U] 90.87
I:158 [LYS] V:75 [A] 4.57 U:19 [U] 99.0
I:158 [LYS] V:76 [G] 2.55 U:18 [C] 99.0
I:159 [GLY] V:77 [G] 3.36 98.92
I:160 [ILE] V:77 [G] 3.44 84.06
I:162 [ARG] V:75 [A] 2.91 U:19 [U] 93.73
I:162 [ARG] V:76 [G] 2.54 U:18 [C] 93.73
I:162 [ARG] V:77 [G] 4.42 93.73
I:163 [SER] V:77 [G] 3.97 83.32
I:178 [PHE] V:75 [A] 3.39 U:19 [U] 94.64
I:178 [PHE] V:76 [G] 3.88 U:18 [C] 94.64
I:179 [GLY] V:75 [A] 3.74 U:19 [U] 96.43
I:180 [ASN] V:74 [G] 2.85 U:20 [C] sugar:BB 57.18
I:180 [ASN] V:75 [A] 2.94 U:19 [U] 57.18
I:181 [GLU] U:19 [U] 4.55 V:75 [A] 46.9
I:181 [GLU] U:20 [C] 3.26 V:74 [G] sugar:SC 46.9
I:181 [GLU] U:21 [C] 4.9 V:73 [G] 46.9
I:181 [GLU] V:74 [G] 3.34 U:20 [C] base:BB 46.9
I:181 [GLU] V:75 [A] 3.71 U:19 [U] 46.9
I:182 [GLU] V:74 [G] 4.49 U:20 [C] 39.27
I:183 [ARG] V:74 [G] 3.19 U:20 [C] 41.5
I:183 [ARG] V:75 [A] 3.91 U:19 [U] 41.5
I:184 [GLU] V:74 [G] 3.24 U:20 [C] 70.25
I:184 [GLU] V:75 [A] 3.9 U:19 [U] 70.25
I:185 [GLY] V:74 [G] 3.85 U:20 [C] 92.37
I:185 [GLY] V:75 [A] 2.9 U:19 [U] 92.37
I:206 [VAL] V:84 [A] 4.13 U:10 [U] 91.13
I:207 [ILE] U:12 [G] 4.44 V:82 [C] 85.34
I:207 [ILE] V:82 [C] 3.55 U:12 [G] 85.34
I:207 [ILE] V:84 [A] 3.78 U:10 [U] 85.34
I:208 [THR] V:82 [C] 4.12 U:12 [G] 95.31
I:208 [THR] V:83 [C] 3.15 95.31
I:208 [THR] V:84 [A] 2.69 U:10 [U] sugar:SC 95.31
I:209 [PRO] U:12 [G] 3.73 V:82 [C] 95.41
I:209 [PRO] V:82 [C] 3.29 U:12 [G] 95.41
I:209 [PRO] V:83 [C] 3.6 95.41
I:209 [PRO] V:84 [A] 4.67 U:10 [U] 95.41
I:210 [HIS] V:82 [C] 3.97 U:12 [G] 96.53
I:210 [HIS] V:83 [C] 2.55 base/AA stacks 96.53
I:210 [HIS] V:85 [G] 3.19 U:9 [C] sugar:SC 96.53
I:211 [TYR] V:82 [C] 4.34 U:12 [G] 94.44
I:211 [TYR] V:83 [C] 2.63 base:SC 94.44
I:212 [ASN] U:12 [G] 4.04 V:82 [C] 54.81
I:212 [ASN] U:13 [U] 4.12 V:81 [A] 54.81
I:212 [ASN] V:81 [A] 3.56 U:13 [U] sugar:SC 54.81
I:212 [ASN] V:82 [C] 3.32 U:12 [G] base/AA stacks 54.81
I:212 [ASN] V:83 [C] 4.31 54.81
I:221 [GLU] U:9 [C] 4.57 V:85 [G] 56.54
I:221 [GLU] U:10 [U] 3.28 V:84 [A] 56.54
I:222 [PRO] U:10 [U] 2.4 V:84 [A] sugar:BB 98.8
I:222 [PRO] V:84 [A] 4.73 U:10 [U] 98.8
I:222 [PRO] V:85 [G] 3.64 U:9 [C] 98.8
I:223 [ARG] U:10 [U] 3.83 V:84 [A] 66.44
I:223 [ARG] U:11 [G] 3.55 66.44
I:223 [ARG] U:12 [G] 3.6 V:82 [C] base:SC 66.44
I:223 [ARG] U:13 [U] 2.69 V:81 [A] sugar:SC 66.44
I:224 [PRO] U:10 [U] 3.34 V:84 [A] 98.82
I:224 [PRO] U:11 [G] 3.36 98.82
I:224 [PRO] U:12 [G] 4.56 V:82 [C] 98.82
I:224 [PRO] V:84 [A] 3.36 U:10 [U] 98.82
I:225 [VAL] U:12 [G] 3.36 V:82 [C] 80.5
I:226 [ILE] V:84 [A] 4.94 U:10 [U] 60.11
I:263 [LEU] V:77 [G] 4.19 80.4
I:264 [GLY] V:77 [G] 2.93 base:BB 98.69
I:264 [GLY] V:79 [A] 3.29 U:15 [U] 98.69
I:264 [GLY] V:80 [A] 4.06 U:14 [U] 98.69
I:265 [ALA] V:79 [A] 3.54 U:15 [U] 96.86
I:265 [ALA] V:80 [A] 3.34 U:14 [U] 96.86
I:266 [ARG] U:12 [G] 3.59 V:82 [C] base:SC 92.5
I:266 [ARG] V:80 [A] 2.89 U:14 [U] 92.5
I:266 [ARG] V:81 [A] 4.24 U:13 [U] 92.5
I:266 [ARG] V:82 [C] 3.37 U:12 [G] 92.5
I:267 [SER] V:80 [A] 4.15 U:14 [U] 95.97
I:268 [SER] V:80 [A] 4.62 U:14 [U] 82.03
I:268 [SER] V:81 [A] 2.86 U:13 [U] 82.03
I:269 [VAL] V:82 [C] 4.54 U:12 [G] 72.28

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group11 6S8B_I_U,V I: Crispr-associated ramp protein, cmr6 family, Sulfolobus islandicus (strain rey15a) (genetically engineered) U: Cognate target RNA (46-mer), Sulfolobus islandicus rey15a (natural) V: crRNA, Sulfolobus islandicus rey15a (natural) F0NDX3 ✘

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
3X1L_H_I 6S8B_I_U,V 0.95 0.64 0.97 0.12 compare