RNAprotDB

All interfaces > All interologs > Interface groups > group111 > 2R8S_H_R vs 7MLX_H_R

Interface analysis


mouse controls

Style

Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Structure
Structure (with hetatm)
Chain
Chainbow

View

Focus on

Interface
RNA
Protein
All

Show chains

Interface

show interface as licorice

Common contacts -

2R8S_H
2R8S_R
7MLX_H
7MLX_R
Conserved?
H:52 [SER] R:175 [G] H:55 [SER] R:44 [C] ✔
H:57 [TYR] R:175 [G] H:60 [SER] R:44 [C] ✔
H:102 [GLY] R:165 [C] H:105 [ARG] R:39 [A] ✔
H:103 [MET] R:165 [C] H:106 [ARG] R:39 [A] ✔
H:57 [TYR] R:174 [G] H:60 [SER] R:43 [A] ❌ 7MLX_H_R
H:102 [GLY] R:175 [G] H:105 [ARG] R:44 [C] ❌ 7MLX_H_R
H:103 [MET] R:175 [G] H:106 [ARG] R:44 [C] ❌ 7MLX_H_R
H:99 [ARG] R:174 [G] H:102 [GLN] R:43 [A] ❌ 2R8S_H_R
H:106 [TYR] R:174 [G] H:110 [ARG] R:43 [A] ❌ 2R8S_H_R
H:108 [PHE] R:174 [G] H:112 [PHE] R:43 [A] ❌ 2R8S_H_R
H:52 [SER] R:174 [G] H:55 [SER] R:43 [A] ❌ 2R8S_H_R
H:53 [SER] R:175 [G] H:56 [PRO] R:44 [C] ❌ 2R8S_H_R
H:53 [SER] R:174 [G] H:56 [PRO] R:43 [A] ❌ 2R8S_H_R
H:53 [SER] R:177 [U] H:56 [PRO] R:46 [C] ❌ 7MLX_R:46 no longer at interface
H:54 [SER] R:177 [U] H:57 [TYR] R:46 [C] ❌ 7MLX_R:46 no longer at interface
H:104 [SER] R:174 [G] H:108 [SER] R:43 [A] ❌ 7MLX_H:108 no longer at interface
H:104 [SER] R:175 [G] H:108 [SER] R:44 [C] ❌ 7MLX_H:108 no longer at interface
H:105 [THR] R:174 [G] H:109 [GLY] R:43 [A] ❌ 7MLX_H:109 no longer at interface
H:50 [TYR] R:175 [G] H:53 [SER] R:44 [C] ❌ 7MLX_H:53 no longer at interface
H:33 [SER] R:174 [G] H:36 [SER] R:43 [A] ❌ 2R8S_H:33 no longer at interface
H:35 [HIS] R:174 [G] H:38 [HIS] R:43 [A] ❌ 2R8S_H:35 no longer at interface
H:55 [TYR] R:175 [G] H:58 [SER] R:44 [C] ❌ 2R8S_H:55 no longer at interface
H:59 [TYR] R:175 [G] H:62 [TYR] R:44 [C] ❌ 2R8S_H:59 no longer at interface
H:59 [TYR] R:174 [G] H:62 [TYR] R:43 [A] ❌ 2R8S_H:59 no longer at interface

logo_download Export the table of contacts

Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.75 3.05 0.00 0.94 0.25 0.72 0.43 0.19 0.16 0.00 0.55


Other pairs involving 2R8S_H_R or 7MLX_H_R

Total number of entries: 8

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6X5M_h_r 7MLX_H_R 0.99 0.89 1.01 0.86 Immunoglobulin/Fibronectin type III/E set domains/PapD-like compare
6DB8_H_R 7MLX_H_R 0.95 0.79 1.5 0.86 Immunoglobulin/Fibronectin type III/E set domains/PapD-like compare
6B3K_H_R 7MLX_H_R 0.98 0.79 1.18 0.57 Immunoglobulin/Fibronectin type III/E set domains/PapD-like compare
6U8D_H_A 7MLX_H_R 0.24 0.64 5.1 0.0 Immunoglobulin/Fibronectin type III/E set domains/PapD-like compare
6B14_H_R 7MLX_H_R 0.98 0.79 1.24 0.86 Immunoglobulin/Fibronectin type III/E set domains/PapD-like compare
2R8S_H_R 6B14_H_R 0.20 0.63 3.45 0.12 Immunoglobulin/Fibronectin type III/E set domains/PapD-like compare
2R8S_H_R 6B3K_H_R 0.15 0.63 3.5 0.0 Immunoglobulin/Fibronectin type III/E set domains/PapD-like compare
2R8S_H_R 7MLX_H_R 0.19 0.75 3.05 0.0 Immunoglobulin/Fibronectin type III/E set domains/PapD-like compare