Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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Focus on
InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
6X5M_h
|
6X5M_r
|
7MLX_H
|
7MLX_R
|
Conserved?
|
---|---|---|---|---|
h:106 [ARG] | r:13 [C] | H:106 [ARG] | R:39 [A] | ✔ |
h:106 [ARG] | r:14 [G] | H:106 [ARG] | R:40 [G] | ✔ |
h:106 [ARG] | r:16 [A] | H:106 [ARG] | R:42 [A] | ✔ |
h:56 [PRO] | r:16 [A] | H:56 [PRO] | R:42 [A] | ✔ |
h:56 [PRO] | r:17 [A] | H:56 [PRO] | R:43 [A] | ✔ |
h:56 [PRO] | r:18 [C] | H:56 [PRO] | R:44 [C] | ✔ |
h:56 [PRO] | r:19 [A] | H:56 [PRO] | R:45 [A] | ✔ |
h:34 [TYR] | r:15 [A] | H:34 [TYR] | R:41 [A] | ✔ |
h:34 [TYR] | r:16 [A] | H:34 [TYR] | R:42 [A] | ✔ |
h:103 [GLY] | r:16 [A] | H:103 [GLY] | R:42 [A] | ✔ |
h:62 [TYR] | r:17 [A] | H:62 [TYR] | R:43 [A] | ✔ |
h:62 [TYR] | r:18 [C] | H:62 [TYR] | R:44 [C] | ✔ |
h:58 [SER] | r:18 [C] | H:58 [SER] | R:44 [C] | ✔ |
h:58 [SER] | r:19 [A] | H:58 [SER] | R:45 [A] | ✔ |
h:57 [TYR] | r:15 [A] | H:57 [TYR] | R:41 [A] | ✔ |
h:57 [TYR] | r:16 [A] | H:57 [TYR] | R:42 [A] | ✔ |
h:57 [TYR] | r:19 [A] | H:57 [TYR] | R:45 [A] | ✔ |
h:36 [SER] | r:17 [A] | H:36 [SER] | R:43 [A] | ✔ |
h:60 [SER] | r:18 [C] | H:60 [SER] | R:44 [C] | ✔ |
h:38 [HIS] | r:17 [A] | H:38 [HIS] | R:43 [A] | ✔ |
h:102 [GLN] | r:17 [A] | H:102 [GLN] | R:43 [A] | ✔ |
h:110 [ARG] | r:17 [A] | H:110 [ARG] | R:43 [A] | ✔ |
h:112 [PHE] | r:17 [A] | H:112 [PHE] | R:43 [A] | ✔ |
h:105 [ARG] | r:13 [C] | H:105 [ARG] | R:39 [A] | ✔ |
h:105 [ARG] | r:14 [G] | H:105 [ARG] | R:40 [G] | ✔ |
h:105 [ARG] | r:16 [A] | H:105 [ARG] | R:42 [A] | ✔ |
h:55 [SER] | r:17 [A] | H:55 [SER] | R:43 [A] | ✔ |
h:55 [SER] | r:18 [C] | H:55 [SER] | R:44 [C] | ✔ |
h:104 [TYR] | r:15 [A] | H:104 [TYR] | R:41 [A] | ✔ |
h:104 [TYR] | r:16 [A] | H:104 [TYR] | R:42 [A] | ✔ |
h:105 [ARG] | r:12 [U] | H:105 [ARG] | R:38 [C] | ❌ 7MLX_R:38 no longer at interface |
h:31 [TYR] | r:15 [A] | H:31 [TYR] | R:41 [A] | ❌ 6X5M_h:31 no longer at interface |
h:35 [SER] | r:15 [A] | H:35 [SER] | R:41 [A] | ❌ 6X5M_h:35 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.89 | 1.01 | 0.86 | 0.96 | 0.34 | 1.0 | 1.0 | 0.99 | 0.98 | 0.82 | 1.00 |
Other pairs involving 6X5M_h_r or 7MLX_H_R
Total number of entries: 10