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All interfaces > All interologs > Interface groups > group112 > 4W2F_AG_AA

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Licorice
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Licorice
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Chain
Chain (with hetatm)
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Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

4W2F_AG
4W2F_AA
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
AG:2 [ALA] AA:935 [A] 3.77 AA:1380 [U] 0.0
AG:2 [ALA] AA:936 [C] 3.96 AA:1379 [G] 0.0
AG:2 [ALA] AA:1377 [A] 3.02 0.0
AG:2 [ALA] AA:1378 [C] 3.78 0.0
AG:2 [ALA] AA:1379 [G] 3.21 AA:936 [C] base:BB 0.0
AG:2 [ALA] AA:1380 [U] 3.44 AA:935 [A] base:BB 0.0
AG:3 [ARG] AA:932 [C] 3.56 AA:1385 [G] base/AA stacks 0.0
AG:3 [ARG] AA:933 [G] 2.57 AA:1384 [C] base:SC, base:SC 0.0
AG:3 [ARG] AA:935 [A] 3.3 AA:1380 [U] base/AA stacks 0.0
AG:3 [ARG] AA:1379 [G] 4.87 AA:936 [C] 0.0
AG:3 [ARG] AA:1380 [U] 3.05 AA:935 [A] base/AA stacks 0.0
AG:3 [ARG] AA:1383 [C] 4.45 0.0
AG:3 [ARG] AA:1384 [C] 4.26 AA:933 [G] 0.0
AG:3 [ARG] AA:1385 [G] 4.77 AA:932 [C] 0.0
AG:4 [ARG] AA:932 [C] 3.42 AA:1385 [G] 0.0
AG:4 [ARG] AA:933 [G] 3.95 AA:1384 [C] 0.0
AG:4 [ARG] AA:1092 [A] 3.36 0.0
AG:4 [ARG] AA:1093 [A] 4.34 0.0
AG:5 [ARG] AA:1378 [C] 4.2 0.0
AG:6 [ARG] AA:1378 [C] 3.83 0.0
AG:6 [ARG] AA:1379 [G] 2.98 AA:936 [C] 0.0
AG:7 [ALA] AA:1377 [A] 3.31 0.0
AG:7 [ALA] AA:1378 [C] 3.11 0.0
AG:8 [GLU] AA:1377 [A] 4.82 0.0
AG:10 [ARG] AA:1346 [A] 3.13 AA:1375 [A] sugar:SC base/AA stacks 0.0
AG:10 [ARG] AA:1375 [A] 4.1 AA:1346 [A] 0.0
AG:10 [ARG] AA:1376 [U] 3.24 AA:1345 [U] base:SC 0.0
AG:10 [ARG] AA:1377 [A] 4.97 0.0
AG:12 [LEU] AA:1375 [A] 3.19 AA:1346 [A] 0.0
AG:25 [ALA] AA:1375 [A] 4.81 AA:1346 [A] 0.0
AG:28 [ASN] AA:1373 [G] 4.97 AA:1349 [A] 0.0
AG:28 [ASN] AA:1374 [A] 3.29 AA:1348 [U] 0.0
AG:28 [ASN] AA:1375 [A] 2.91 AA:1346 [A] 0.0
AG:29 [LYS] AA:939 [G] 4.04 AA:1344 [C] 0.0
AG:29 [LYS] AA:940 [C] 3.1 AA:1343 [G] 0.0
AG:29 [LYS] AA:1240 [U] 4.98 0.0
AG:29 [LYS] AA:1375 [A] 2.8 AA:1346 [A] sugar:SC 0.0
AG:30 [ILE] AA:1240 [U] 2.76 base:BB 0.0
AG:31 [MET] AA:1240 [U] 4.93 0.0
AG:31 [MET] AA:1373 [G] 3.78 AA:1349 [A] 0.0
AG:31 [MET] AA:1374 [A] 3.24 AA:1348 [U] 0.0
AG:32 [ARG] AA:1240 [U] 2.97 sugar:SC, sugar:SC base/AA stacks 0.0
AG:33 [ASP] AA:1350 [A] 2.62 AA:1372 [U] sugar:SC 0.0
AG:33 [ASP] AA:1351 [U] 3.31 AA:1371 [G] 0.0
AG:33 [ASP] AA:1372 [U] 4.07 AA:1350 [A] 0.0
AG:34 [GLY] AA:1350 [A] 4.17 AA:1372 [U] 0.0
AG:34 [GLY] AA:1372 [U] 2.88 AA:1350 [A] sugar:BB 0.0
AG:34 [GLY] AA:1373 [G] 3.2 AA:1349 [A] sugar:BB 0.0
AG:35 [LYS] AA:1240 [U] 4.79 0.0
AG:35 [LYS] AA:1241 [G] 2.81 AA:1296 [C] 0.0
AG:35 [LYS] AA:1289 [A] 3.46 AA:1248 [A] 0.0
AG:35 [LYS] AA:1290 [G] 3.22 AA:1247 [U] 0.0
AG:35 [LYS] AA:1372 [U] 4.54 AA:1350 [A] 0.0
AG:36 [LYS] AA:1372 [U] 4.55 AA:1350 [A] 0.0
AG:36 [LYS] AA:1373 [G] 3.36 AA:1349 [A] 0.0
AG:36 [LYS] AA:1374 [A] 3.23 AA:1348 [U] 0.0
AG:37 [ASN] AA:1290 [G] 4.1 AA:1247 [U] 0.0
AG:37 [ASN] AA:1291 [G] 3.22 AA:1246 [C] 0.0
AG:38 [LEU] AA:1240 [U] 3.52 0.0
AG:38 [LEU] AA:1241 [G] 4.13 AA:1296 [C] 0.0
AG:38 [LEU] AA:1291 [G] 4.39 AA:1246 [C] 0.0
AG:39 [ALA] AA:1240 [U] 4.99 0.0
AG:41 [ARG] AA:1291 [G] 3.01 AA:1246 [C] 0.0
AG:41 [ARG] AA:1292 [U] 2.77 AA:1245 [A] 0.0
AG:42 [ILE] AA:1240 [U] 3.86 0.0
AG:76 [ARG] AA:1378 [C] 2.93 base:SC 0.0
AG:78 [ARG] AA:1381 [U] 4.68 0.0
AG:79 [ARG] AA:1381 [U] 3.23 base:BB 0.0
AG:82 [GLY] AA:693 [G] 3.9 0.0
AG:83 [ALA] AA:693 [G] 4.43 0.0
AG:85 [TYR] AA:694 [A] 4.6 0.0
AG:94 [ARG] AA:1376 [U] 3.29 AA:1345 [U] 0.0
AG:94 [ARG] AA:1377 [A] 3.11 0.0
AG:95 [ARG] AA:938 [A] 3.45 0.0
AG:95 [ARG] AA:939 [G] 3.03 AA:1344 [C] 0.0
AG:98 [SER] AA:1375 [A] 4.89 AA:1346 [A] 0.0
AG:98 [SER] AA:1376 [U] 2.54 AA:1345 [U] 0.0
AG:99 [LEU] AA:939 [G] 4.12 AA:1344 [C] 0.0
AG:102 [ARG] AA:938 [A] 4.83 0.0
AG:102 [ARG] AA:939 [G] 2.8 AA:1344 [C] 0.0
AG:102 [ARG] AA:940 [C] 3.2 AA:1343 [G] 0.0
AG:102 [ARG] AA:1375 [A] 4.48 AA:1346 [A] 0.0
AG:102 [ARG] AA:1376 [U] 3.89 AA:1345 [U] 0.0
AG:105 [VAL] AA:1240 [U] 3.94 0.0
AG:109 [ASN] AA:1240 [U] 3.04 base:SC 0.0
AG:114 [ARG] AA:1239 [A] 2.75 AA:1299 [A] sugar:BB 0.0
AG:114 [ARG] AA:1240 [U] 3.57 0.0
AG:114 [ARG] AA:1297 [C] 2.6 base:SC, sugar:SC 0.0
AG:114 [ARG] AA:1298 [C] 3.23 base/AA stacks 0.0
AG:115 [ARG] AA:1239 [A] 4.39 AA:1299 [A] 0.0
AG:115 [ARG] AA:1240 [U] 3.09 0.0
AG:115 [ARG] AA:1297 [C] 4.92 0.0
AG:116 [ALA] AA:1239 [A] 4.76 AA:1299 [A] 0.0
AG:116 [ALA] AA:1240 [U] 2.34 0.0
AG:119 [ARG] AA:1239 [A] 4.36 AA:1299 [A] 0.0
AG:119 [ARG] AA:1240 [U] 2.7 0.0
AG:120 [ILE] AA:1240 [U] 4.99 0.0
AG:156 [TRP] AA:1378 [C] 4.6 0.0

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group112 4W2F_AG_AA AG: 30s ribosomal protein s7, Thermus thermophilus (natural) AA: 16s ribosomal RNA, Thermus thermophilus (natural) P17291 Ribosomal protein S7 Bacterial small subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4W2F_AG_AA 7RYG_g_a 0.20 0.88 5.56 0.12 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4W2F_AG_AA 7O7Y_Ae_A2 0.48 0.93 1.93 0.19 Ribosomal protein S7 compare
4W2F_AG_AA 6S0X_g_a 0.72 0.96 2.93 0.41 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4W2F_AG_AA 4YBB_AG_AA 0.82 0.96 3.89 0.45 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4W2F_AG_AA 7K00_G_A 0.83 0.98 1.2 0.47 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4W2F_AG_AA 4Y4O_1g_1a 0.95 1.0 0.97 0.93 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare