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All interfaces > All interologs > Interface groups > group112 > 4Y4O_1g_1a vs 4YBB_AG_AA

Interface analysis


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Common contacts -

4Y4O_1g
4Y4O_1a
4YBB_AG
4YBB_AA
Conserved?
1g:76 [ARG] 1a:1378 [C] AG:76 [LYS] AA:1378 [C] ✔
1g:33 [ASP] 1a:1350 [A] AG:33 [ASP] AA:1350 [A] ✔
1g:33 [ASP] 1a:1351 [U] AG:33 [ASP] AA:1351 [U] ✔
1g:33 [ASP] 1a:1372 [U] AG:33 [ASP] AA:1372 [U] ✔
1g:38 [LEU] 1a:1240 [U] AG:38 [THR] AA:1240 [U] ✔
1g:38 [LEU] 1a:1291 [G] AG:38 [THR] AA:1291 [U] ✔
1g:32 [ARG] 1a:1240 [U] AG:32 [VAL] AA:1240 [U] ✔
1g:116 [ALA] 1a:1239 [A] AG:116 [MET] AA:1239 [A] ✔
1g:116 [ALA] 1a:1240 [U] AG:116 [MET] AA:1240 [U] ✔
1g:41 [ARG] 1a:1291 [G] AG:41 [SER] AA:1291 [U] ✔
1g:25 [ALA] 1a:1375 [A] AG:25 [LYS] AA:1375 [A] ✔
1g:4 [ARG] 1a:932 [C] AG:4 [ARG] AA:932 [C] ✔
1g:4 [ARG] 1a:933 [G] AG:4 [ARG] AA:933 [G] ✔
1g:4 [ARG] 1a:1092 [A] AG:4 [ARG] AA:1092 [A] ✔
1g:4 [ARG] 1a:1093 [A] AG:4 [ARG] AA:1093 [A] ✔
1g:98 [SER] 1a:1376 [U] AG:98 [ALA] AA:1376 [U] ✔
1g:36 [LYS] 1a:1372 [U] AG:36 [LYS] AA:1372 [U] ✔
1g:36 [LYS] 1a:1373 [G] AG:36 [LYS] AA:1373 [G] ✔
1g:36 [LYS] 1a:1374 [A] AG:36 [LYS] AA:1374 [A] ✔
1g:109 [ASN] 1a:1240 [U] AG:109 [ARG] AA:1240 [U] ✔
1g:35 [LYS] 1a:1241 [G] AG:35 [LYS] AA:1241 [G] ✔
1g:35 [LYS] 1a:1289 [A] AG:35 [LYS] AA:1289 [A] ✔
1g:35 [LYS] 1a:1290 [G] AG:35 [LYS] AA:1290 [G] ✔
1g:35 [LYS] 1a:1372 [U] AG:35 [LYS] AA:1372 [U] ✔
1g:10 [ARG] 1a:1346 [A] AG:10 [ARG] AA:1346 [A] ✔
1g:10 [ARG] 1a:1375 [A] AG:10 [ARG] AA:1375 [A] ✔
1g:10 [ARG] 1a:1376 [U] AG:10 [ARG] AA:1376 [U] ✔
1g:37 [ASN] 1a:1290 [G] AG:37 [SER] AA:1290 [G] ✔
1g:37 [ASN] 1a:1291 [G] AG:37 [SER] AA:1291 [U] ✔
1g:3 [ARG] 1a:932 [C] AG:3 [ARG] AA:932 [C] ✔
1g:3 [ARG] 1a:933 [G] AG:3 [ARG] AA:933 [G] ✔
1g:3 [ARG] 1a:935 [A] AG:3 [ARG] AA:935 [A] ✔
1g:3 [ARG] 1a:1379 [G] AG:3 [ARG] AA:1379 [G] ✔
1g:3 [ARG] 1a:1380 [U] AG:3 [ARG] AA:1380 [U] ✔
1g:3 [ARG] 1a:1384 [C] AG:3 [ARG] AA:1384 [C] ✔
1g:42 [ILE] 1a:1240 [U] AG:42 [ILE] AA:1240 [U] ✔
1g:115 [ARG] 1a:1239 [A] AG:115 [SER] AA:1239 [A] ✔
1g:115 [ARG] 1a:1240 [U] AG:115 [SER] AA:1240 [U] ✔
1g:99 [LEU] 1a:939 [G] AG:99 [LEU] AA:939 [G] ✔
1g:28 [ASN] 1a:1374 [A] AG:28 [ASN] AA:1374 [A] ✔
1g:28 [ASN] 1a:1375 [A] AG:28 [ASN] AA:1375 [A] ✔
1g:102 [ARG] 1a:939 [G] AG:102 [ARG] AA:939 [G] ✔
1g:102 [ARG] 1a:940 [C] AG:102 [ARG] AA:940 [C] ✔
1g:102 [ARG] 1a:1375 [A] AG:102 [ARG] AA:1375 [A] ✔
1g:102 [ARG] 1a:1376 [U] AG:102 [ARG] AA:1376 [U] ✔
1g:6 [ARG] 1a:1378 [C] AG:6 [VAL] AA:1378 [C] ✔
1g:6 [ARG] 1a:1379 [G] AG:6 [VAL] AA:1379 [G] ✔
1g:105 [VAL] 1a:1240 [U] AG:105 [VAL] AA:1240 [U] ✔
1g:119 [ARG] 1a:1239 [A] AG:119 [ARG] AA:1239 [A] ✔
1g:119 [ARG] 1a:1240 [U] AG:119 [ARG] AA:1240 [U] ✔
1g:12 [LEU] 1a:1375 [A] AG:12 [ILE] AA:1375 [A] ✔
1g:117 [ALA] 1a:1240 [U] AG:117 [ALA] AA:1240 [U] ✔
1g:34 [GLY] 1a:1350 [A] AG:34 [GLY] AA:1350 [A] ✔
1g:34 [GLY] 1a:1372 [U] AG:34 [GLY] AA:1372 [U] ✔
1g:34 [GLY] 1a:1373 [G] AG:34 [GLY] AA:1373 [G] ✔
1g:30 [ILE] 1a:1240 [U] AG:30 [LEU] AA:1240 [U] ✔
1g:29 [LYS] 1a:1374 [A] AG:29 [ILE] AA:1374 [A] ✔
1g:29 [LYS] 1a:1375 [A] AG:29 [ILE] AA:1375 [A] ✔
1g:31 [MET] 1a:1373 [G] AG:31 [MET] AA:1373 [G] ✔
1g:31 [MET] 1a:1374 [A] AG:31 [MET] AA:1374 [A] ✔
1g:7 [ALA] 1a:1377 [A] AG:7 [ILE] AA:1377 [A] ✔
1g:7 [ALA] 1a:1378 [C] AG:7 [ILE] AA:1378 [C] ✔
1g:114 [ARG] 1a:1239 [A] AG:114 [LYS] AA:1239 [A] ✔
1g:114 [ARG] 1a:1297 [C] AG:114 [LYS] AA:1297 [G] ✔
1g:114 [ARG] 1a:1298 [C] AG:114 [LYS] AA:1298 [U] ✔
1g:95 [ARG] 1a:938 [A] AG:95 [ARG] AA:938 [A] ✔
1g:95 [ARG] 1a:939 [G] AG:95 [ARG] AA:939 [G] ✔
1g:95 [ARG] 1a:1377 [A] AG:95 [ARG] AA:1377 [A] ✔
1g:2 [ALA] 1a:935 [A] AG:2 [PRO] AA:935 [A] ✔
1g:2 [ALA] 1a:937 [A] AG:2 [PRO] AA:937 [A] ✔
1g:2 [ALA] 1a:1377 [A] AG:2 [PRO] AA:1377 [A] ✔
1g:2 [ALA] 1a:1378 [C] AG:2 [PRO] AA:1378 [C] ✔
1g:2 [ALA] 1a:1379 [G] AG:2 [PRO] AA:1379 [G] ✔
1g:2 [ALA] 1a:1380 [U] AG:2 [PRO] AA:1380 [U] ✔
1g:38 [LEU] 1a:1241 [G] AG:38 [THR] AA:1241 [G] ❌ 4YBB_AG_AA
1g:10 [ARG] 1a:1377 [A] AG:10 [ARG] AA:1377 [A] ❌ 4YBB_AG_AA
1g:5 [ARG] 1a:1378 [C] AG:5 [ARG] AA:1378 [C] ❌ 4YBB_AG_AA
1g:102 [ARG] 1a:938 [A] AG:102 [ARG] AA:938 [A] ❌ 4YBB_AG_AA
1g:29 [LYS] 1a:939 [G] AG:29 [ILE] AA:939 [G] ❌ 4YBB_AG_AA
1g:29 [LYS] 1a:940 [C] AG:29 [ILE] AA:940 [C] ❌ 4YBB_AG_AA
1g:31 [MET] 1a:1240 [U] AG:31 [MET] AA:1240 [U] ❌ 4YBB_AG_AA
1g:114 [ARG] 1a:1240 [U] AG:114 [LYS] AA:1240 [U] ❌ 4YBB_AG_AA
1g:109 [ASN] 1a:1239 [A] AG:109 [ARG] AA:1239 [A] ❌ 4Y4O_1g_1a
1g:115 [ARG] 1a:1298 [C] AG:115 [SER] AA:1298 [U] ❌ 4Y4O_1g_1a
1g:115 [ARG] 1a:1297 [C] AG:115 [SER] AA:1297 [G] ❌ 4Y4O_1g_1a
1g:29 [LYS] 1a:1376 [U] AG:29 [ILE] AA:1376 [U] ❌ 4Y4O_1g_1a
1g:35 [LYS] 1a:1351 [U] AG:35 [LYS] AA:1351 [U] ❌ 4Y4O_1g_1a
1g:38 [LEU] 1a:1290 [G] AG:38 [THR] AA:1290 [G] ❌ 4Y4O_1g_1a
1g:5 [ARG] 1a:1377 [A] AG:5 [ARG] AA:1377 [A] ❌ 4Y4O_1g_1a
1g:76 [ARG] 1a:937 [A] AG:76 [LYS] AA:937 [A] ❌ 4Y4O_1g_1a
1g:76 [ARG] 1a:938 [A] AG:76 [LYS] AA:938 [A] ❌ 4Y4O_1g_1a
1g:95 [ARG] 1a:1376 [U] AG:95 [ARG] AA:1376 [U] ❌ 4Y4O_1g_1a
1g:82 [GLY] 1a:693 [G] AG:82 [GLY] AA:693 [G] ❌ 4YBB_AG:82, 4YBB_AA:693 no longer at interface
1g:81 [GLY] 1a:693 [G] AG:81 [GLY] AA:693 [G] ❌ 4YBB_AG:81, 4YBB_AA:693 no longer at interface
1g:41 [ARG] 1a:1292 [U] AG:41 [SER] AA:1292 [G] ❌ 4YBB_AA:1292 no longer at interface
1g:3 [ARG] 1a:1383 [C] AG:3 [ARG] AA:1383 [C] ❌ 4YBB_AA:1383 no longer at interface
1g:3 [ARG] 1a:1385 [G] AG:3 [ARG] AA:1385 [G] ❌ 4YBB_AA:1385 no longer at interface
1g:80 [VAL] 1a:693 [G] AG:80 [VAL] AA:693 [G] ❌ 4YBB_AA:693 no longer at interface
1g:85 [TYR] 1a:693 [G] AG:85 [TYR] AA:693 [G] ❌ 4YBB_AG:85, 4YBB_AA:693 no longer at interface
1g:85 [TYR] 1a:694 [A] AG:85 [TYR] AA:694 [A] ❌ 4YBB_AG:85, 4YBB_AA:694 no longer at interface
1g:83 [ALA] 1a:693 [G] AG:83 [SER] AA:693 [G] ❌ 4YBB_AG:83, 4YBB_AA:693 no longer at interface
1g:83 [ALA] 1a:694 [A] AG:83 [SER] AA:694 [A] ❌ 4YBB_AG:83, 4YBB_AA:694 no longer at interface
1g:109 [ASN] 1a:1238 [A] AG:109 [ARG] AA:1238 [A] ❌ 4Y4O_1a:1238 no longer at interface
1g:2 [ALA] 1a:936 [C] AG:2 [PRO] AA:936 [C] ❌ 4Y4O_1a:936 no longer at interface
1g:34 [GLY] 1a:1349 [A] AG:34 [GLY] AA:1349 [A] ❌ 4Y4O_1a:1349 no longer at interface
1g:4 [ARG] 1a:1091 [U] AG:4 [ARG] AA:1091 [U] ❌ 4Y4O_1a:1091 no longer at interface
1g:5 [ARG] 1a:1345 [U] AG:5 [ARG] AA:1345 [U] ❌ 4Y4O_1a:1345 no longer at interface
1g:78 [ARG] 1a:1381 [U] AG:78 [ARG] AA:1381 [U] ❌ 4Y4O_1g:78, 4Y4O_1a:1381 no longer at interface
1g:79 [ARG] 1a:1382 [C] AG:79 [ARG] AA:1382 [C] ❌ 4Y4O_1g:79, 4Y4O_1a:1382 no longer at interface
1g:79 [ARG] 1a:1381 [U] AG:79 [ARG] AA:1381 [U] ❌ 4Y4O_1g:79, 4Y4O_1a:1381 no longer at interface
1g:80 [VAL] 1a:1382 [C] AG:80 [VAL] AA:1382 [C] ❌ 4Y4O_1a:1382 no longer at interface
1g:80 [VAL] 1a:1381 [U] AG:80 [VAL] AA:1381 [U] ❌ 4Y4O_1a:1381 no longer at interface
1g:94 [ARG] 1a:1375 [A] AG:94 [VAL] AA:1375 [A] ❌ 4YBB_AG:94 no longer at interface
1g:94 [ARG] 1a:1376 [U] AG:94 [VAL] AA:1376 [U] ❌ 4YBB_AG:94 no longer at interface
1g:94 [ARG] 1a:1377 [A] AG:94 [VAL] AA:1377 [A] ❌ 4YBB_AG:94 no longer at interface
1g:8 [GLU] 1a:1377 [A] AG:8 [GLY] AA:1377 [A] ❌ 4YBB_AG:8 no longer at interface
1g:120 [ILE] 1a:1240 [U] AG:120 [LEU] AA:1240 [U] ❌ 4YBB_AG:120 no longer at interface
1g:106 [GLN] 1a:940 [C] AG:106 [GLU] AA:940 [C] ❌ 4Y4O_1g:106 no longer at interface
1g:112 [PRO] 1a:1298 [C] AG:112 [GLY] AA:1298 [U] ❌ 4Y4O_1g:112 no longer at interface
1g:113 [GLU] 1a:1298 [C] AG:113 [ASP] AA:1298 [U] ❌ 4Y4O_1g:113 no longer at interface
1g:24 [THR] 1a:1375 [A] AG:24 [ALA] AA:1375 [A] ❌ 4Y4O_1g:24 no longer at interface
1g:39 [ALA] 1a:1240 [U] AG:39 [ALA] AA:1240 [U] ❌ 4Y4O_1g:39 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S7 Bacterial small subunit ribosomal RNA 0.96 4.23 0.43 0.95 0.96 0.83 0.86 0.76 0.73 0.42 0.62


Other pairs involving 4Y4O_1g_1a or 4YBB_AG_AA

Total number of entries: 11

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4W2F_AG_AA 4Y4O_1g_1a 0.95 1.0 0.97 0.93 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4Y4O_1g_1a 4YBB_AG_AA 0.76 0.96 4.23 0.43 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4W2F_AG_AA 4YBB_AG_AA 0.82 0.96 3.89 0.45 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4Y4O_1g_1a 6S0X_g_a 0.59 0.95 3.23 0.23 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4YBB_AG_AA 6S0X_g_a 0.72 0.97 3.42 0.54 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4Y4O_1g_1a 7K00_G_A 0.78 0.98 1.18 0.45 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4YBB_AG_AA 7K00_G_A 0.76 0.97 4.0 0.6 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4Y4O_1g_1a 7O7Y_Ae_A2 0.45 0.93 2.9 0.21 Ribosomal protein S7 compare
4YBB_AG_AA 7O7Y_Ae_A2 0.47 0.9 4.12 0.19 Ribosomal protein S7 compare
4Y4O_1g_1a 7RYG_g_a 0.21 0.88 6.23 0.19 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4YBB_AG_AA 7RYG_g_a 0.41 0.96 4.99 0.31 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare