Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
4Y4O_1g
|
4Y4O_1a
|
7O7Y_Ae
|
7O7Y_A2
|
Conserved?
|
---|---|---|---|---|
1g:33 [ASP] | 1a:1350 [A] | Ae:83 [ASN] | A2:1652 [A] | ✔ |
1g:33 [ASP] | 1a:1351 [U] | Ae:83 [ASN] | A2:1653 [G] | ✔ |
1g:33 [ASP] | 1a:1372 [U] | Ae:83 [ASN] | A2:1674 [U] | ✔ |
1g:38 [LEU] | 1a:1240 [U] | Ae:88 [MET] | A2:1536 [U] | ✔ |
1g:38 [LEU] | 1a:1241 [G] | Ae:88 [MET] | A2:1537 [G] | ✔ |
1g:38 [LEU] | 1a:1291 [G] | Ae:88 [MET] | A2:1593 [C] | ✔ |
1g:32 [ARG] | 1a:1240 [U] | Ae:78 [MET] | A2:1536 [U] | ✔ |
1g:116 [ALA] | 1a:1240 [U] | Ae:169 [ILE] | A2:1536 [U] | ✔ |
1g:41 [ARG] | 1a:1291 [G] | Ae:91 [ARG] | A2:1593 [C] | ✔ |
1g:41 [ARG] | 1a:1292 [U] | Ae:91 [ARG] | A2:1594 [C] | ✔ |
1g:98 [SER] | 1a:1376 [U] | Ae:148 [ASN] | A2:1678 [U] | ✔ |
1g:36 [LYS] | 1a:1372 [U] | Ae:86 [LYS] | A2:1674 [U] | ✔ |
1g:36 [LYS] | 1a:1373 [G] | Ae:86 [LYS] | A2:1675 [G] | ✔ |
1g:36 [LYS] | 1a:1374 [A] | Ae:86 [LYS] | A2:1676 [A] | ✔ |
1g:109 [ASN] | 1a:1240 [U] | Ae:159 [ARG] | A2:1536 [U] | ✔ |
1g:35 [LYS] | 1a:1241 [G] | Ae:85 [LYS] | A2:1537 [G] | ✔ |
1g:35 [LYS] | 1a:1289 [A] | Ae:85 [LYS] | A2:1591 [C] | ✔ |
1g:35 [LYS] | 1a:1290 [G] | Ae:85 [LYS] | A2:1592 [C] | ✔ |
1g:35 [LYS] | 1a:1372 [U] | Ae:85 [LYS] | A2:1674 [U] | ✔ |
1g:37 [ASN] | 1a:1290 [G] | Ae:87 [LEU] | A2:1592 [C] | ✔ |
1g:37 [ASN] | 1a:1291 [G] | Ae:87 [LEU] | A2:1593 [C] | ✔ |
1g:42 [ILE] | 1a:1240 [U] | Ae:92 [ILE] | A2:1536 [U] | ✔ |
1g:115 [ARG] | 1a:1240 [U] | Ae:168 [THR] | A2:1536 [U] | ✔ |
1g:28 [ASN] | 1a:1374 [A] | Ae:74 [ASN] | A2:1676 [A] | ✔ |
1g:28 [ASN] | 1a:1375 [A] | Ae:74 [ASN] | A2:1677 [U] | ✔ |
1g:102 [ARG] | 1a:939 [G] | Ae:152 [TRP] | A2:1222 [G] | ✔ |
1g:102 [ARG] | 1a:940 [C] | Ae:152 [TRP] | A2:1223 [G] | ✔ |
1g:102 [ARG] | 1a:1375 [A] | Ae:152 [TRP] | A2:1677 [U] | ✔ |
1g:105 [VAL] | 1a:1240 [U] | Ae:155 [CYS] | A2:1536 [U] | ✔ |
1g:34 [GLY] | 1a:1350 [A] | Ae:84 [GLY] | A2:1652 [A] | ✔ |
1g:34 [GLY] | 1a:1372 [U] | Ae:84 [GLY] | A2:1674 [U] | ✔ |
1g:34 [GLY] | 1a:1373 [G] | Ae:84 [GLY] | A2:1675 [G] | ✔ |
1g:30 [ILE] | 1a:1240 [U] | Ae:76 [MET] | A2:1536 [U] | ✔ |
1g:29 [LYS] | 1a:1374 [A] | Ae:75 [SER] | A2:1676 [A] | ✔ |
1g:29 [LYS] | 1a:1375 [A] | Ae:75 [SER] | A2:1677 [U] | ✔ |
1g:31 [MET] | 1a:1373 [G] | Ae:77 [MET] | A2:1675 [G] | ✔ |
1g:31 [MET] | 1a:1374 [A] | Ae:77 [MET] | A2:1676 [A] | ✔ |
1g:7 [ALA] | 1a:1378 [C] | Ae:58 [ALA] | A2:1680 [A] | ✔ |
1g:114 [ARG] | 1a:1239 [A] | Ae:167 [LYS] | A2:1535 [C] | ✔ |
1g:114 [ARG] | 1a:1240 [U] | Ae:167 [LYS] | A2:1536 [U] | ✔ |
1g:95 [ARG] | 1a:938 [A] | Ae:145 [ARG] | A2:1221 [A] | ✔ |
1g:95 [ARG] | 1a:939 [G] | Ae:145 [ARG] | A2:1222 [G] | ✔ |
1g:95 [ARG] | 1a:1377 [A] | Ae:145 [ARG] | A2:1679 [A2M] | ✔ |
1g:116 [ALA] | 1a:1239 [A] | Ae:169 [ILE] | A2:1535 [C] | ❌ 7O7Y_Ae_A2 |
1g:25 [ALA] | 1a:1375 [A] | Ae:71 [ARG] | A2:1677 [U] | ❌ 7O7Y_Ae_A2 |
1g:115 [ARG] | 1a:1239 [A] | Ae:168 [THR] | A2:1535 [C] | ❌ 7O7Y_Ae_A2 |
1g:102 [ARG] | 1a:938 [A] | Ae:152 [TRP] | A2:1221 [A] | ❌ 7O7Y_Ae_A2 |
1g:102 [ARG] | 1a:1376 [U] | Ae:152 [TRP] | A2:1678 [U] | ❌ 7O7Y_Ae_A2 |
1g:8 [GLU] | 1a:1377 [A] | Ae:59 [LYS] | A2:1679 [A2M] | ❌ 7O7Y_Ae_A2 |
1g:12 [LEU] | 1a:1375 [A] | Ae:63 [LYS] | A2:1677 [U] | ❌ 7O7Y_Ae_A2 |
1g:29 [LYS] | 1a:939 [G] | Ae:75 [SER] | A2:1222 [G] | ❌ 7O7Y_Ae_A2 |
1g:29 [LYS] | 1a:940 [C] | Ae:75 [SER] | A2:1223 [G] | ❌ 7O7Y_Ae_A2 |
1g:31 [MET] | 1a:1240 [U] | Ae:77 [MET] | A2:1536 [U] | ❌ 7O7Y_Ae_A2 |
1g:7 [ALA] | 1a:1377 [A] | Ae:58 [ALA] | A2:1679 [A2M] | ❌ 7O7Y_Ae_A2 |
1g:114 [ARG] | 1a:1297 [C] | Ae:167 [LYS] | A2:1599 [G] | ❌ 7O7Y_Ae_A2 |
1g:114 [ARG] | 1a:1298 [C] | Ae:167 [LYS] | A2:1600 [U] | ❌ 7O7Y_Ae_A2 |
1g:95 [ARG] | 1a:1376 [U] | Ae:145 [ARG] | A2:1678 [U] | ❌ 4Y4O_1g_1a |
1g:98 [SER] | 1a:1377 [A] | Ae:148 [ASN] | A2:1679 [A2M] | ❌ 4Y4O_1g_1a |
1g:7 [ALA] | 1a:1346 [A] | Ae:58 [ALA] | A2:1648 [A] | ❌ 4Y4O_1g_1a |
1g:8 [GLU] | 1a:1378 [C] | Ae:59 [LYS] | A2:1680 [A] | ❌ 4Y4O_1g_1a |
1g:12 [LEU] | 1a:1377 [A] | Ae:63 [LYS] | A2:1679 [A2M] | ❌ 4Y4O_1g_1a |
1g:12 [LEU] | 1a:1376 [U] | Ae:63 [LYS] | A2:1678 [U] | ❌ 4Y4O_1g_1a |
1g:25 [ALA] | 1a:1376 [U] | Ae:71 [ARG] | A2:1678 [U] | ❌ 4Y4O_1g_1a |
1g:28 [ASN] | 1a:1373 [G] | Ae:74 [ASN] | A2:1675 [G] | ❌ 4Y4O_1g_1a |
1g:32 [ARG] | 1a:1375 [A] | Ae:78 [MET] | A2:1677 [U] | ❌ 4Y4O_1g_1a |
1g:32 [ARG] | 1a:940 [C] | Ae:78 [MET] | A2:1223 [G] | ❌ 4Y4O_1g_1a |
1g:33 [ASP] | 1a:940 [C] | Ae:83 [ASN] | A2:1223 [G] | ❌ 4Y4O_1g_1a |
1g:35 [LYS] | 1a:1351 [U] | Ae:85 [LYS] | A2:1653 [G] | ❌ 4Y4O_1g_1a |
1g:37 [ASN] | 1a:1373 [G] | Ae:87 [LEU] | A2:1675 [G] | ❌ 4Y4O_1g_1a |
1g:38 [LEU] | 1a:1290 [G] | Ae:88 [MET] | A2:1592 [C] | ❌ 4Y4O_1g_1a |
1g:41 [ARG] | 1a:1240 [U] | Ae:91 [ARG] | A2:1536 [U] | ❌ 4Y4O_1g_1a |
1g:41 [ARG] | 1a:1241 [G] | Ae:91 [ARG] | A2:1537 [G] | ❌ 4Y4O_1g_1a |
1g:82 [GLY] | 1a:693 [G] | Ae:132 [GLY] | A2:962 [G] | ❌ 7O7Y_Ae:132, 7O7Y_A2:962 no longer at interface |
1g:81 [GLY] | 1a:693 [G] | Ae:131 [ALA] | A2:962 [G] | ❌ 7O7Y_Ae:131, 7O7Y_A2:962 no longer at interface |
1g:80 [VAL] | 1a:693 [G] | Ae:130 [ARG] | A2:962 [G] | ❌ 7O7Y_A2:962 no longer at interface |
1g:85 [TYR] | 1a:693 [G] | Ae:135 [ARG] | A2:962 [G] | ❌ 7O7Y_Ae:135, 7O7Y_A2:962 no longer at interface |
1g:85 [TYR] | 1a:694 [A] | Ae:135 [ARG] | A2:963 [A] | ❌ 7O7Y_Ae:135, 7O7Y_A2:963 no longer at interface |
1g:83 [ALA] | 1a:693 [G] | Ae:133 [THR] | A2:962 [G] | ❌ 7O7Y_Ae:133, 7O7Y_A2:962 no longer at interface |
1g:83 [ALA] | 1a:694 [A] | Ae:133 [THR] | A2:963 [A] | ❌ 7O7Y_Ae:133, 7O7Y_A2:963 no longer at interface |
1g:80 [VAL] | 1a:1382 [C] | Ae:130 [ARG] | A2:1684 [C] | ❌ 4Y4O_1a:1382 no longer at interface |
1g:8 [GLU] | 1a:1175 [G] | Ae:59 [LYS] | A2:1471 [C] | ❌ 4Y4O_1a:1175 no longer at interface |
1g:8 [GLU] | 1a:1174 [G] | Ae:59 [LYS] | A2:1470 [A] | ❌ 4Y4O_1a:1174 no longer at interface |
1g:32 [ARG] | 1a:941 [G] | Ae:78 [MET] | A2:1224 [A] | ❌ 4Y4O_1a:941 no longer at interface |
1g:33 [ASP] | 1a:941 [G] | Ae:83 [ASN] | A2:1224 [A] | ❌ 4Y4O_1a:941 no longer at interface |
1g:33 [ASP] | 1a:1349 [A] | Ae:83 [ASN] | A2:1651 [A] | ❌ 4Y4O_1a:1349 no longer at interface |
1g:34 [GLY] | 1a:1349 [A] | Ae:84 [GLY] | A2:1651 [A] | ❌ 4Y4O_1a:1349 no longer at interface |
1g:76 [ARG] | 1a:1378 [C] | Ae:126 [THR] | A2:1680 [A] | ❌ 7O7Y_Ae:126 no longer at interface |
1g:94 [ARG] | 1a:1375 [A] | Ae:144 [LEU] | A2:1677 [U] | ❌ 7O7Y_Ae:144 no longer at interface |
1g:94 [ARG] | 1a:1376 [U] | Ae:144 [LEU] | A2:1678 [U] | ❌ 7O7Y_Ae:144 no longer at interface |
1g:94 [ARG] | 1a:1377 [A] | Ae:144 [LEU] | A2:1679 [A2M] | ❌ 7O7Y_Ae:144 no longer at interface |
1g:10 [ARG] | 1a:1346 [A] | Ae:61 [PHE] | A2:1648 [A] | ❌ 7O7Y_Ae:61 no longer at interface |
1g:10 [ARG] | 1a:1375 [A] | Ae:61 [PHE] | A2:1677 [U] | ❌ 7O7Y_Ae:61 no longer at interface |
1g:10 [ARG] | 1a:1376 [U] | Ae:61 [PHE] | A2:1678 [U] | ❌ 7O7Y_Ae:61 no longer at interface |
1g:10 [ARG] | 1a:1377 [A] | Ae:61 [PHE] | A2:1679 [A2M] | ❌ 7O7Y_Ae:61 no longer at interface |
1g:99 [LEU] | 1a:939 [G] | Ae:149 [GLN] | A2:1222 [G] | ❌ 7O7Y_Ae:149 no longer at interface |
1g:119 [ARG] | 1a:1239 [A] | Ae:172 [CYS] | A2:1535 [C] | ❌ 7O7Y_Ae:172 no longer at interface |
1g:119 [ARG] | 1a:1240 [U] | Ae:172 [CYS] | A2:1536 [U] | ❌ 7O7Y_Ae:172 no longer at interface |
1g:120 [ILE] | 1a:1240 [U] | Ae:173 [LEU] | A2:1536 [U] | ❌ 7O7Y_Ae:173 no longer at interface |
1g:117 [ALA] | 1a:1240 [U] | Ae:170 [ALA] | A2:1536 [U] | ❌ 7O7Y_Ae:170 no longer at interface |
1g:77 [SER] | 1a:937 [A] | Ae:127 [ARG] | A2:1220 [C] | ❌ 4Y4O_1g:77 no longer at interface |
1g:77 [SER] | 1a:938 [A] | Ae:127 [ARG] | A2:1221 [A] | ❌ 4Y4O_1g:77 no longer at interface |
1g:112 [PRO] | 1a:1240 [U] | Ae:162 [ALA] | A2:1536 [U] | ❌ 4Y4O_1g:112 no longer at interface |
1g:112 [PRO] | 1a:1239 [A] | Ae:162 [ALA] | A2:1535 [C] | ❌ 4Y4O_1g:112 no longer at interface |
1g:113 [GLU] | 1a:1298 [C] | Ae:165 [ASN] | A2:1600 [U] | ❌ 4Y4O_1g:113 no longer at interface |
1g:113 [GLU] | 1a:1239 [A] | Ae:165 [ASN] | A2:1535 [C] | ❌ 4Y4O_1g:113 no longer at interface |
1g:9 [VAL] | 1a:1378 [C] | Ae:60 [ARG] | A2:1680 [A] | ❌ 4Y4O_1g:9 no longer at interface |
1g:9 [VAL] | 1a:1379 [G] | Ae:60 [ARG] | A2:1681 [G] | ❌ 4Y4O_1g:9 no longer at interface |
1g:24 [THR] | 1a:1374 [A] | Ae:70 [GLU] | A2:1676 [A] | ❌ 4Y4O_1g:24 no longer at interface |
1g:39 [ALA] | 1a:1240 [U] | Ae:89 [THR] | A2:1536 [U] | ❌ 4Y4O_1g:39 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Ribosomal protein S7 | 0.93 | 2.9 | 0.21 | 0.81 | 0.93 | 0.6 | 0.69 | 0.45 | 0.47 | 0.27 | 0.56 |
Other pairs involving 4Y4O_1g_1a or 7O7Y_Ae_A2
Total number of entries: 10