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All interfaces > All interologs > Interface groups > group112 > 4Y4O_1g_1a vs 7RYG_g_a

Interface analysis


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Licorice
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RNA

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Licorice
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Common contacts -

4Y4O_1g
4Y4O_1a
7RYG_g
7RYG_a
Conserved?
1g:94 [ARG] 1a:1376 [U] g:92 [ARG] a:1373 [U] ✔
1g:94 [ARG] 1a:1377 [A] g:92 [ARG] a:1374 [A] ✔
1g:25 [ALA] 1a:1375 [A] g:29 [HIS] a:1372 [A] ✔
1g:4 [ARG] 1a:932 [C] g:3 [ARG] a:929 [C] ✔
1g:4 [ARG] 1a:933 [G] g:3 [ARG] a:930 [G] ✔
1g:36 [LYS] 1a:1372 [U] g:34 [GLY] a:1369 [U] ✔
1g:36 [LYS] 1a:1373 [G] g:34 [GLY] a:1370 [G] ✔
1g:35 [LYS] 1a:1372 [U] g:33 [ASP] a:1369 [U] ✔
1g:37 [ASN] 1a:1290 [G] g:35 [LYS] a:1287 [G] ✔
1g:8 [GLU] 1a:1377 [A] g:7 [VAL] a:1374 [A] ✔
1g:105 [VAL] 1a:1240 [U] g:105 [VAL] a:1237 [U] ✔
1g:31 [MET] 1a:1240 [U] g:32 [GLN] a:1237 [U] ✔
1g:7 [ALA] 1a:1378 [C] g:6 [VAL] a:1375 [C] ✔
1g:95 [ARG] 1a:938 [A] g:95 [ARG] a:935 [A] ✔
1g:95 [ARG] 1a:939 [G] g:95 [ARG] a:936 [G] ✔
1g:95 [ARG] 1a:1377 [A] g:95 [ARG] a:1374 [A] ✔
1g:2 [ALA] 1a:1377 [A] g:2 [PRO] a:1374 [A] ✔
1g:2 [ALA] 1a:1378 [C] g:2 [PRO] a:1375 [C] ✔
1g:2 [ALA] 1a:1379 [G] g:2 [PRO] a:1376 [G] ✔
1g:2 [ALA] 1a:1380 [U] g:2 [PRO] a:1377 [U] ✔
1g:38 [LEU] 1a:1240 [U] g:36 [LYS] a:1237 [U] ❌ 7RYG_g_a
1g:38 [LEU] 1a:1241 [G] g:36 [LYS] a:1238 [G] ❌ 7RYG_g_a
1g:38 [LEU] 1a:1291 [G] g:36 [LYS] a:1288 [C] ❌ 7RYG_g_a
1g:94 [ARG] 1a:1375 [A] g:92 [ARG] a:1372 [A] ❌ 7RYG_g_a
1g:4 [ARG] 1a:1092 [A] g:3 [ARG] a:1089 [A] ❌ 7RYG_g_a
1g:4 [ARG] 1a:1093 [A] g:3 [ARG] a:1090 [A] ❌ 7RYG_g_a
1g:36 [LYS] 1a:1374 [A] g:34 [GLY] a:1371 [A] ❌ 7RYG_g_a
1g:35 [LYS] 1a:1241 [G] g:33 [ASP] a:1238 [G] ❌ 7RYG_g_a
1g:35 [LYS] 1a:1289 [A] g:33 [ASP] a:1286 [A] ❌ 7RYG_g_a
1g:35 [LYS] 1a:1290 [G] g:33 [ASP] a:1287 [G] ❌ 7RYG_g_a
1g:37 [ASN] 1a:1291 [G] g:35 [LYS] a:1288 [C] ❌ 7RYG_g_a
1g:5 [ARG] 1a:1378 [C] g:4 [ARG] a:1375 [C] ❌ 7RYG_g_a
1g:6 [ARG] 1a:1378 [C] g:5 [ARG] a:1375 [C] ❌ 7RYG_g_a
1g:6 [ARG] 1a:1379 [G] g:5 [ARG] a:1376 [G] ❌ 7RYG_g_a
1g:31 [MET] 1a:1373 [G] g:32 [GLN] a:1370 [G] ❌ 7RYG_g_a
1g:31 [MET] 1a:1374 [A] g:32 [GLN] a:1371 [A] ❌ 7RYG_g_a
1g:7 [ALA] 1a:1377 [A] g:6 [VAL] a:1374 [A] ❌ 7RYG_g_a
1g:2 [ALA] 1a:935 [A] g:2 [PRO] a:932 [A] ❌ 7RYG_g_a
1g:2 [ALA] 1a:933 [G] g:2 [PRO] a:930 [G] ❌ 4Y4O_1g_1a
1g:2 [ALA] 1a:932 [C] g:2 [PRO] a:929 [C] ❌ 4Y4O_1g_1a
1g:25 [ALA] 1a:1376 [U] g:29 [HIS] a:1373 [U] ❌ 4Y4O_1g_1a
1g:4 [ARG] 1a:935 [A] g:3 [ARG] a:932 [A] ❌ 4Y4O_1g_1a
1g:4 [ARG] 1a:1380 [U] g:3 [ARG] a:1377 [U] ❌ 4Y4O_1g_1a
1g:35 [LYS] 1a:1351 [U] g:33 [ASP] a:1348 [U] ❌ 4Y4O_1g_1a
1g:35 [LYS] 1a:1350 [A] g:33 [ASP] a:1347 [A] ❌ 4Y4O_1g_1a
1g:36 [LYS] 1a:1350 [A] g:34 [GLY] a:1347 [A] ❌ 4Y4O_1g_1a
1g:37 [ASN] 1a:1289 [A] g:35 [LYS] a:1286 [A] ❌ 4Y4O_1g_1a
1g:37 [ASN] 1a:1372 [U] g:35 [LYS] a:1369 [U] ❌ 4Y4O_1g_1a
1g:37 [ASN] 1a:1241 [G] g:35 [LYS] a:1238 [G] ❌ 4Y4O_1g_1a
1g:38 [LEU] 1a:1373 [G] g:36 [LYS] a:1370 [G] ❌ 4Y4O_1g_1a
1g:38 [LEU] 1a:1374 [A] g:36 [LYS] a:1371 [A] ❌ 4Y4O_1g_1a
1g:38 [LEU] 1a:1372 [U] g:36 [LYS] a:1369 [U] ❌ 4Y4O_1g_1a
1g:5 [ARG] 1a:933 [G] g:4 [ARG] a:930 [G] ❌ 4Y4O_1g_1a
1g:5 [ARG] 1a:1092 [A] g:4 [ARG] a:1089 [A] ❌ 4Y4O_1g_1a
1g:5 [ARG] 1a:1093 [A] g:4 [ARG] a:1090 [A] ❌ 4Y4O_1g_1a
1g:5 [ARG] 1a:932 [C] g:4 [ARG] a:929 [C] ❌ 4Y4O_1g_1a
1g:6 [ARG] 1a:933 [G] g:5 [ARG] a:930 [G] ❌ 4Y4O_1g_1a
1g:8 [GLU] 1a:1378 [C] g:7 [VAL] a:1375 [C] ❌ 4Y4O_1g_1a
1g:94 [ARG] 1a:1378 [C] g:92 [ARG] a:1375 [C] ❌ 4Y4O_1g_1a
1g:95 [ARG] 1a:1376 [U] g:95 [ARG] a:1373 [U] ❌ 4Y4O_1g_1a
1g:41 [ARG] 1a:1292 [U] g:39 [ALA] a:1289 [C] ❌ 7RYG_g:39, 7RYG_a:1289 no longer at interface
1g:119 [ARG] 1a:1239 [A] g:107 [ALA] a:1235 [A] ❌ 7RYG_g:107, 7RYG_a:1235 no longer at interface
1g:2 [ALA] 1a:937 [A] g:2 [PRO] a:934 [A] ❌ 7RYG_a:934 no longer at interface
1g:11 [GLN] 1a:1345 [U] g:10 [ARG] a:1342 [U] ❌ 4Y4O_1g:11, 4Y4O_1a:1345 no longer at interface
1g:2 [ALA] 1a:936 [C] g:2 [PRO] a:933 [C] ❌ 4Y4O_1a:936 no longer at interface
1g:5 [ARG] 1a:1091 [U] g:4 [ARG] a:1088 [U] ❌ 4Y4O_1a:1091 no longer at interface
1g:5 [ARG] 1a:931 [C] g:4 [ARG] a:928 [C] ❌ 4Y4O_1a:931 no longer at interface
1g:6 [ARG] 1a:1345 [U] g:5 [ARG] a:1342 [U] ❌ 4Y4O_1a:1345 no longer at interface
1g:41 [ARG] 1a:1291 [G] g:39 [ALA] a:1288 [C] ❌ 7RYG_g:39 no longer at interface
1g:98 [SER] 1a:1376 [U] g:99 [LEU] a:1373 [U] ❌ 7RYG_g:99 no longer at interface
1g:10 [ARG] 1a:1346 [A] g:9 [ALA] a:1343 [A] ❌ 7RYG_g:9 no longer at interface
1g:10 [ARG] 1a:1375 [A] g:9 [ALA] a:1372 [A] ❌ 7RYG_g:9 no longer at interface
1g:10 [ARG] 1a:1376 [U] g:9 [ALA] a:1373 [U] ❌ 7RYG_g:9 no longer at interface
1g:10 [ARG] 1a:1377 [A] g:9 [ALA] a:1374 [A] ❌ 7RYG_g:9 no longer at interface
1g:119 [ARG] 1a:1240 [U] g:107 [ALA] a:1237 [U] ❌ 7RYG_g:107 no longer at interface
1g:12 [LEU] 1a:1375 [A] g:11 [GLU] a:1372 [A] ❌ 7RYG_g:11 no longer at interface
1g:120 [ILE] 1a:1240 [U] g:108 [ALA] a:1237 [U] ❌ 7RYG_g:108 no longer at interface
1g:11 [GLN] 1a:1377 [A] g:10 [ARG] a:1374 [A] ❌ 4Y4O_1g:11 no longer at interface
1g:11 [GLN] 1a:1375 [A] g:10 [ARG] a:1372 [A] ❌ 4Y4O_1g:11 no longer at interface
1g:11 [GLN] 1a:1376 [U] g:10 [ARG] a:1373 [U] ❌ 4Y4O_1g:11 no longer at interface
1g:11 [GLN] 1a:1346 [A] g:10 [ARG] a:1343 [A] ❌ 4Y4O_1g:11 no longer at interface
1g:101 [LEU] 1a:1375 [A] g:102 [ARG] a:1372 [A] ❌ 4Y4O_1g:101 no longer at interface
1g:101 [LEU] 1a:1376 [U] g:102 [ARG] a:1373 [U] ❌ 4Y4O_1g:101 no longer at interface
1g:101 [LEU] 1a:939 [G] g:102 [ARG] a:936 [G] ❌ 4Y4O_1g:101 no longer at interface
1g:13 [GLN] 1a:1375 [A] g:12 [ILE] a:1372 [A] ❌ 4Y4O_1g:13 no longer at interface
1g:21 [VAL] 1a:1375 [A] g:25 [LYS] a:1372 [A] ❌ 4Y4O_1g:21 no longer at interface
1g:21 [VAL] 1a:1376 [U] g:25 [LYS] a:1373 [U] ❌ 4Y4O_1g:21 no longer at interface
1g:24 [THR] 1a:1375 [A] g:28 [ASN] a:1372 [A] ❌ 4Y4O_1g:24 no longer at interface
1g:24 [THR] 1a:1374 [A] g:28 [ASN] a:1371 [A] ❌ 4Y4O_1g:24 no longer at interface
1g:26 [PHE] 1a:1240 [U] g:30 [VAL] a:1237 [U] ❌ 4Y4O_1g:26 no longer at interface
1g:27 [ILE] 1a:1374 [A] g:31 [MET] a:1371 [A] ❌ 4Y4O_1g:27 no longer at interface
1g:27 [ILE] 1a:1240 [U] g:31 [MET] a:1237 [U] ❌ 4Y4O_1g:27 no longer at interface
1g:27 [ILE] 1a:1373 [G] g:31 [MET] a:1370 [G] ❌ 4Y4O_1g:27 no longer at interface
1g:40 [ALA] 1a:1291 [G] g:38 [ILE] a:1288 [C] ❌ 4Y4O_1g:40 no longer at interface
1g:40 [ALA] 1a:1290 [G] g:38 [ILE] a:1287 [G] ❌ 4Y4O_1g:40 no longer at interface
1g:40 [ALA] 1a:1240 [U] g:38 [ILE] a:1237 [U] ❌ 4Y4O_1g:40 no longer at interface
1g:40 [ALA] 1a:1241 [G] g:38 [ILE] a:1238 [G] ❌ 4Y4O_1g:40 no longer at interface
1g:44 [TYR] 1a:1240 [U] g:42 [ILE] a:1237 [U] ❌ 4Y4O_1g:44 no longer at interface
1g:9 [VAL] 1a:1377 [A] g:8 [ALA] a:1374 [A] ❌ 4Y4O_1g:9 no longer at interface
1g:97 [GLN] 1a:1376 [U] g:98 [ALA] a:1373 [U] ❌ 4Y4O_1g:97 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S7 Bacterial small subunit ribosomal RNA 0.88 6.23 0.19 0.92 0.91 0.47 0.77 0.21 0.09 0.11 0.50


Other pairs involving 4Y4O_1g_1a or 7RYG_g_a

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4W2F_AG_AA 7RYG_g_a 0.20 0.88 5.56 0.12 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4W2F_AG_AA 4Y4O_1g_1a 0.95 1.0 0.97 0.93 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4Y4O_1g_1a 7O7Y_Ae_A2 0.45 0.93 2.9 0.21 Ribosomal protein S7 compare
4Y4O_1g_1a 6S0X_g_a 0.59 0.95 3.23 0.23 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4Y4O_1g_1a 7RYG_g_a 0.21 0.88 6.23 0.19 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4Y4O_1g_1a 4YBB_AG_AA 0.76 0.96 4.23 0.43 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4Y4O_1g_1a 7K00_G_A 0.78 0.98 1.18 0.45 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4YBB_AG_AA 7RYG_g_a 0.41 0.96 4.99 0.31 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
6S0X_g_a 7RYG_g_a 0.22 0.95 5.27 0.12 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare