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All interfaces > All interologs > Interface groups > group112 > 4YBB_AG_AA vs 7K00_G_A

Interface analysis


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Common contacts -

4YBB_AG
4YBB_AA
7K00_G
7K00_A
Conserved?
AG:33 [ASP] AA:1350 [A] G:33 [ASP] A:1350 [A] ✔
AG:33 [ASP] AA:1351 [U] G:33 [ASP] A:1351 [U] ✔
AG:33 [ASP] AA:1372 [U] G:33 [ASP] A:1372 [U] ✔
AG:78 [ARG] AA:1381 [U] G:78 [ARG] A:1381 [U] ✔
AG:116 [MET] AA:1240 [U] G:117 [ALA] A:1240 [U] ✔
AG:4 [ARG] AA:932 [C] G:4 [ARG] A:932 [C] ✔
AG:4 [ARG] AA:933 [G] G:4 [ARG] A:933 [G] ✔
AG:4 [ARG] AA:1092 [A] G:4 [ARG] A:1092 [A] ✔
AG:4 [ARG] AA:1093 [A] G:4 [ARG] A:1093 [A] ✔
AG:115 [SER] AA:1239 [A] G:116 [MET] A:1239 [A] ✔
AG:115 [SER] AA:1240 [U] G:116 [MET] A:1240 [U] ✔
AG:36 [LYS] AA:1372 [U] G:36 [LYS] A:1372 [U] ✔
AG:36 [LYS] AA:1373 [G] G:36 [LYS] A:1373 [G] ✔
AG:36 [LYS] AA:1374 [A] G:36 [LYS] A:1374 [A] ✔
AG:39 [ALA] AA:1240 [U] G:39 [ALA] A:1240 [U] ✔
AG:35 [LYS] AA:1241 [G] G:35 [LYS] A:1241 [G] ✔
AG:35 [LYS] AA:1289 [A] G:35 [LYS] A:1289 [A] ✔
AG:35 [LYS] AA:1290 [G] G:35 [LYS] A:1290 [G] ✔
AG:35 [LYS] AA:1351 [U] G:35 [LYS] A:1351 [U] ✔
AG:35 [LYS] AA:1372 [U] G:35 [LYS] A:1372 [U] ✔
AG:10 [ARG] AA:1346 [A] G:10 [ARG] A:1346 [A] ✔
AG:10 [ARG] AA:1375 [A] G:10 [ARG] A:1375 [A] ✔
AG:10 [ARG] AA:1376 [U] G:10 [ARG] A:1376 [U] ✔
AG:79 [ARG] AA:1381 [U] G:79 [ARG] A:1381 [U] ✔
AG:79 [ARG] AA:1382 [C] G:79 [ARG] A:1382 [C] ✔
AG:3 [ARG] AA:932 [C] G:3 [ARG] A:932 [C] ✔
AG:3 [ARG] AA:933 [G] G:3 [ARG] A:933 [G] ✔
AG:3 [ARG] AA:935 [A] G:3 [ARG] A:935 [A] ✔
AG:3 [ARG] AA:1379 [G] G:3 [ARG] A:1379 [G] ✔
AG:3 [ARG] AA:1380 [U] G:3 [ARG] A:1380 [U] ✔
AG:3 [ARG] AA:1384 [C] G:3 [ARG] A:1384 [C] ✔
AG:42 [ILE] AA:1240 [U] G:42 [ILE] A:1240 [U] ✔
AG:28 [ASN] AA:1374 [A] G:28 [ASN] A:1374 [A] ✔
AG:28 [ASN] AA:1375 [A] G:28 [ASN] A:1375 [A] ✔
AG:2 [PRO] AA:935 [A] G:2 [PRO] A:935 [A] ✔
AG:2 [PRO] AA:936 [C] G:2 [PRO] A:936 [C] ✔
AG:2 [PRO] AA:937 [A] G:2 [PRO] A:937 [A] ✔
AG:2 [PRO] AA:1377 [A] G:2 [PRO] A:1377 [A] ✔
AG:2 [PRO] AA:1378 [C] G:2 [PRO] A:1378 [C] ✔
AG:2 [PRO] AA:1379 [G] G:2 [PRO] A:1379 [G] ✔
AG:2 [PRO] AA:1380 [U] G:2 [PRO] A:1380 [U] ✔
AG:32 [VAL] AA:1240 [U] G:32 [VAL] A:1240 [U] ✔
AG:102 [ARG] AA:939 [G] G:99 [LEU] A:939 [G] ✔
AG:114 [LYS] AA:1239 [A] G:115 [SER] A:1239 [A] ✔
AG:114 [LYS] AA:1297 [G] G:115 [SER] A:1297 [G] ✔
AG:114 [LYS] AA:1298 [U] G:115 [SER] A:1298 [U] ✔
AG:12 [ILE] AA:1375 [A] G:12 [ILE] A:1375 [A] ✔
AG:7 [ILE] AA:1377 [A] G:7 [ILE] A:1377 [A] ✔
AG:7 [ILE] AA:1378 [C] G:7 [ILE] A:1378 [C] ✔
AG:38 [THR] AA:1240 [U] G:38 [THR] A:1240 [U] ✔
AG:38 [THR] AA:1290 [G] G:38 [THR] A:1290 [G] ✔
AG:38 [THR] AA:1291 [U] G:38 [THR] A:1291 [U] ✔
AG:76 [LYS] AA:1378 [C] G:76 [LYS] A:1378 [C] ✔
AG:25 [LYS] AA:1375 [A] G:25 [LYS] A:1375 [A] ✔
AG:30 [LEU] AA:1240 [U] G:30 [LEU] A:1240 [U] ✔
AG:34 [GLY] AA:1349 [A] G:34 [GLY] A:1349 [A] ✔
AG:34 [GLY] AA:1350 [A] G:34 [GLY] A:1350 [A] ✔
AG:34 [GLY] AA:1372 [U] G:34 [GLY] A:1372 [U] ✔
AG:34 [GLY] AA:1373 [G] G:34 [GLY] A:1373 [G] ✔
AG:29 [ILE] AA:1374 [A] G:29 [ILE] A:1374 [A] ✔
AG:29 [ILE] AA:1375 [A] G:29 [ILE] A:1375 [A] ✔
AG:29 [ILE] AA:1376 [U] G:29 [ILE] A:1376 [U] ✔
AG:31 [MET] AA:1373 [G] G:31 [MET] A:1373 [G] ✔
AG:31 [MET] AA:1374 [A] G:31 [MET] A:1374 [A] ✔
AG:37 [SER] AA:1290 [G] G:37 [SER] A:1290 [G] ✔
AG:37 [SER] AA:1291 [U] G:37 [SER] A:1291 [U] ✔
AG:116 [MET] AA:1239 [A] G:117 [ALA] A:1239 [A] ❌ 7K00_G_A
AG:115 [SER] AA:1297 [G] G:116 [MET] A:1297 [G] ❌ 7K00_G_A
AG:115 [SER] AA:1298 [U] G:116 [MET] A:1298 [U] ❌ 7K00_G_A
AG:109 [ARG] AA:1239 [A] G:106 [GLU] A:1239 [A] ❌ 7K00_G_A
AG:109 [ARG] AA:1240 [U] G:106 [GLU] A:1240 [U] ❌ 7K00_G_A
AG:5 [ARG] AA:1377 [A] G:5 [ARG] A:1377 [A] ❌ 7K00_G_A
AG:98 [ALA] AA:1376 [U] G:95 [ARG] A:1376 [U] ❌ 7K00_G_A
AG:102 [ARG] AA:940 [C] G:99 [LEU] A:940 [C] ❌ 7K00_G_A
AG:102 [ARG] AA:1375 [A] G:99 [LEU] A:1375 [A] ❌ 7K00_G_A
AG:102 [ARG] AA:1376 [U] G:99 [LEU] A:1376 [U] ❌ 7K00_G_A
AG:105 [VAL] AA:1240 [U] G:102 [ARG] A:1240 [U] ❌ 7K00_G_A
AG:76 [LYS] AA:937 [A] G:76 [LYS] A:937 [A] ❌ 7K00_G_A
AG:76 [LYS] AA:938 [A] G:76 [LYS] A:938 [A] ❌ 7K00_G_A
AG:10 [ARG] AA:1377 [A] G:10 [ARG] A:1377 [A] ❌ 4YBB_AG_AA
AG:105 [VAL] AA:940 [C] G:102 [ARG] A:940 [C] ❌ 4YBB_AG_AA
AG:105 [VAL] AA:1375 [A] G:102 [ARG] A:1375 [A] ❌ 4YBB_AG_AA
AG:105 [VAL] AA:938 [A] G:102 [ARG] A:938 [A] ❌ 4YBB_AG_AA
AG:105 [VAL] AA:1376 [U] G:102 [ARG] A:1376 [U] ❌ 4YBB_AG_AA
AG:105 [VAL] AA:939 [G] G:102 [ARG] A:939 [G] ❌ 4YBB_AG_AA
AG:109 [ARG] AA:940 [C] G:106 [GLU] A:940 [C] ❌ 4YBB_AG_AA
AG:114 [LYS] AA:1240 [U] G:115 [SER] A:1240 [U] ❌ 4YBB_AG_AA
AG:12 [ILE] AA:1374 [A] G:12 [ILE] A:1374 [A] ❌ 4YBB_AG_AA
AG:25 [LYS] AA:1376 [U] G:25 [LYS] A:1376 [U] ❌ 4YBB_AG_AA
AG:31 [MET] AA:1240 [U] G:31 [MET] A:1240 [U] ❌ 4YBB_AG_AA
AG:35 [LYS] AA:1240 [U] G:35 [LYS] A:1240 [U] ❌ 4YBB_AG_AA
AG:38 [THR] AA:1241 [G] G:38 [THR] A:1241 [G] ❌ 4YBB_AG_AA
AG:5 [ARG] AA:1379 [G] G:5 [ARG] A:1379 [G] ❌ 4YBB_AG_AA
AG:5 [ARG] AA:1378 [C] G:5 [ARG] A:1378 [C] ❌ 4YBB_AG_AA
AG:78 [ARG] AA:1379 [G] G:78 [ARG] A:1379 [G] ❌ 4YBB_AG_AA
AG:98 [ALA] AA:1377 [A] G:95 [ARG] A:1377 [A] ❌ 4YBB_AG_AA
AG:98 [ALA] AA:939 [G] G:95 [ARG] A:939 [G] ❌ 4YBB_AG_AA
AG:98 [ALA] AA:938 [A] G:95 [ARG] A:938 [A] ❌ 4YBB_AG_AA
AG:4 [ARG] AA:1091 [U] G:4 [ARG] A:1091 [U] ❌ 7K00_A:1091 no longer at interface
AG:109 [ARG] AA:1238 [A] G:106 [GLU] A:1238 [A] ❌ 7K00_A:1238 no longer at interface
AG:5 [ARG] AA:1345 [U] G:5 [ARG] A:1345 [U] ❌ 7K00_A:1345 no longer at interface
AG:3 [ARG] AA:1385 [G] G:3 [ARG] A:1385 [G] ❌ 4YBB_AA:1385 no longer at interface
AG:3 [ARG] AA:1383 [C] G:3 [ARG] A:1383 [C] ❌ 4YBB_AA:1383 no longer at interface
AG:79 [ARG] AA:1383 [C] G:79 [ARG] A:1383 [C] ❌ 4YBB_AA:1383 no longer at interface
AG:81 [GLY] AA:693 [G] G:81 [GLY] A:693 [G] ❌ 4YBB_AG:81, 4YBB_AA:693 no longer at interface
AG:83 [SER] AA:693 [G] G:83 [SER] A:693 [G] ❌ 4YBB_AG:83, 4YBB_AA:693 no longer at interface
AG:6 [VAL] AA:1378 [C] G:6 [VAL] A:1378 [C] ❌ 7K00_G:6 no longer at interface
AG:6 [VAL] AA:1379 [G] G:6 [VAL] A:1379 [G] ❌ 7K00_G:6 no longer at interface
AG:41 [SER] AA:1291 [U] G:41 [SER] A:1291 [U] ❌ 7K00_G:41 no longer at interface
AG:24 [ALA] AA:1375 [A] G:24 [ALA] A:1375 [A] ❌ 7K00_G:24 no longer at interface
AG:99 [LEU] AA:939 [G] G:96 [ARG] A:939 [G] ❌ 7K00_G:96 no longer at interface
AG:80 [VAL] AA:1381 [U] G:80 [VAL] A:1381 [U] ❌ 7K00_G:80 no longer at interface
AG:80 [VAL] AA:1382 [C] G:80 [VAL] A:1382 [C] ❌ 7K00_G:80 no longer at interface
AG:106 [GLU] AA:940 [C] G:103 [TRP] A:940 [C] ❌ 7K00_G:103 no longer at interface
AG:119 [ARG] AA:1239 [A] G:120 [LEU] A:1239 [A] ❌ 7K00_G:120 no longer at interface
AG:119 [ARG] AA:1240 [U] G:120 [LEU] A:1240 [U] ❌ 7K00_G:120 no longer at interface
AG:117 [ALA] AA:1240 [U] G:118 [LEU] A:1240 [U] ❌ 7K00_G:118 no longer at interface
AG:113 [ASP] AA:1298 [U] G:113 [ASP] A:1298 [U] ❌ 7K00_G:113 no longer at interface
AG:112 [GLY] AA:1298 [U] G:111 [ARG] A:1298 [U] ❌ 7K00_G:111 no longer at interface
AG:108 [ALA] AA:1240 [U] G:105 [VAL] A:1240 [U] ❌ 4YBB_AG:108 no longer at interface
AG:118 [LEU] AA:1239 [A] G:119 [ARG] A:1239 [A] ❌ 4YBB_AG:118 no longer at interface
AG:118 [LEU] AA:1240 [U] G:119 [ARG] A:1240 [U] ❌ 4YBB_AG:118 no longer at interface
AG:77 [SER] AA:1381 [U] G:77 [SER] A:1381 [U] ❌ 4YBB_AG:77 no longer at interface
AG:92 [ARG] AA:1377 [A] G:92 [ARG] A:1377 [A] ❌ 4YBB_AG:92 no longer at interface
AG:92 [ARG] AA:1378 [C] G:92 [ARG] A:1378 [C] ❌ 4YBB_AG:92 no longer at interface
AG:101 [MET] AA:1376 [U] G:98 [ALA] A:1376 [U] ❌ 4YBB_AG:101 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S7 Bacterial small subunit ribosomal RNA 0.97 4.0 0.60 0.97 0.98 0.78 0.92 0.76 0.66 0.34 0.47


Other pairs involving 4YBB_AG_AA or 7K00_G_A

Total number of entries: 10

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1g_1a 4YBB_AG_AA 0.76 0.96 4.23 0.43 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4Y4O_1g_1a 7K00_G_A 0.78 0.98 1.18 0.45 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
7K00_G_A 7O7Y_Ae_A2 0.46 0.91 2.33 0.23 Ribosomal protein S7 compare
6S0X_g_a 7K00_G_A 0.64 0.95 3.32 0.41 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4YBB_AG_AA 7K00_G_A 0.76 0.97 4.0 0.6 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4YBB_AG_AA 6S0X_g_a 0.72 0.97 3.42 0.54 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4YBB_AG_AA 7O7Y_Ae_A2 0.47 0.9 4.12 0.19 Ribosomal protein S7 compare
4YBB_AG_AA 7RYG_g_a 0.41 0.96 4.99 0.31 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4W2F_AG_AA 4YBB_AG_AA 0.82 0.96 3.89 0.45 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4W2F_AG_AA 7K00_G_A 0.83 0.98 1.2 0.47 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare