Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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InterfaceRNA
Protein
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Interface
show interface as licoriceCommon contacts -
4YBB_AG
|
4YBB_AA
|
7O7Y_Ae
|
7O7Y_A2
|
Conserved?
|
---|---|---|---|---|
AG:33 [ASP] | AA:1350 [A] | Ae:83 [ASN] | A2:1652 [A] | ✔ |
AG:33 [ASP] | AA:1351 [U] | Ae:83 [ASN] | A2:1653 [G] | ✔ |
AG:33 [ASP] | AA:1372 [U] | Ae:83 [ASN] | A2:1674 [U] | ✔ |
AG:116 [MET] | AA:1240 [U] | Ae:169 [ILE] | A2:1536 [U] | ✔ |
AG:115 [SER] | AA:1240 [U] | Ae:168 [THR] | A2:1536 [U] | ✔ |
AG:41 [SER] | AA:1291 [U] | Ae:91 [ARG] | A2:1593 [C] | ✔ |
AG:36 [LYS] | AA:1372 [U] | Ae:86 [LYS] | A2:1674 [U] | ✔ |
AG:36 [LYS] | AA:1373 [G] | Ae:86 [LYS] | A2:1675 [G] | ✔ |
AG:36 [LYS] | AA:1374 [A] | Ae:86 [LYS] | A2:1676 [A] | ✔ |
AG:39 [ALA] | AA:1240 [U] | Ae:89 [THR] | A2:1536 [U] | ✔ |
AG:35 [LYS] | AA:1241 [G] | Ae:85 [LYS] | A2:1537 [G] | ✔ |
AG:35 [LYS] | AA:1289 [A] | Ae:85 [LYS] | A2:1591 [C] | ✔ |
AG:35 [LYS] | AA:1290 [G] | Ae:85 [LYS] | A2:1592 [C] | ✔ |
AG:35 [LYS] | AA:1351 [U] | Ae:85 [LYS] | A2:1653 [G] | ✔ |
AG:35 [LYS] | AA:1372 [U] | Ae:85 [LYS] | A2:1674 [U] | ✔ |
AG:42 [ILE] | AA:1240 [U] | Ae:92 [ILE] | A2:1536 [U] | ✔ |
AG:109 [ARG] | AA:1240 [U] | Ae:159 [ARG] | A2:1536 [U] | ✔ |
AG:98 [ALA] | AA:1376 [U] | Ae:148 [ASN] | A2:1678 [U] | ✔ |
AG:80 [VAL] | AA:1382 [C] | Ae:130 [ARG] | A2:1684 [C] | ✔ |
AG:102 [ARG] | AA:939 [G] | Ae:152 [TRP] | A2:1222 [G] | ✔ |
AG:102 [ARG] | AA:940 [C] | Ae:152 [TRP] | A2:1223 [G] | ✔ |
AG:102 [ARG] | AA:1375 [A] | Ae:152 [TRP] | A2:1677 [U] | ✔ |
AG:114 [LYS] | AA:1239 [A] | Ae:167 [LYS] | A2:1535 [C] | ✔ |
AG:105 [VAL] | AA:1240 [U] | Ae:155 [CYS] | A2:1536 [U] | ✔ |
AG:38 [THR] | AA:1240 [U] | Ae:88 [MET] | A2:1536 [U] | ✔ |
AG:38 [THR] | AA:1290 [G] | Ae:88 [MET] | A2:1592 [C] | ✔ |
AG:38 [THR] | AA:1291 [U] | Ae:88 [MET] | A2:1593 [C] | ✔ |
AG:34 [GLY] | AA:1349 [A] | Ae:84 [GLY] | A2:1651 [A] | ✔ |
AG:34 [GLY] | AA:1350 [A] | Ae:84 [GLY] | A2:1652 [A] | ✔ |
AG:34 [GLY] | AA:1372 [U] | Ae:84 [GLY] | A2:1674 [U] | ✔ |
AG:34 [GLY] | AA:1373 [G] | Ae:84 [GLY] | A2:1675 [G] | ✔ |
AG:29 [ILE] | AA:1374 [A] | Ae:74 [ASN] | A2:1676 [A] | ✔ |
AG:29 [ILE] | AA:1375 [A] | Ae:74 [ASN] | A2:1677 [U] | ✔ |
AG:37 [SER] | AA:1290 [G] | Ae:87 [LEU] | A2:1592 [C] | ✔ |
AG:37 [SER] | AA:1291 [U] | Ae:87 [LEU] | A2:1593 [C] | ✔ |
AG:113 [ASP] | AA:1298 [U] | Ae:165 [ASN] | A2:1600 [U] | ✔ |
AG:95 [ARG] | AA:938 [A] | Ae:145 [ARG] | A2:1221 [A] | ✔ |
AG:95 [ARG] | AA:939 [G] | Ae:145 [ARG] | A2:1222 [G] | ✔ |
AG:95 [ARG] | AA:1376 [U] | Ae:145 [ARG] | A2:1678 [U] | ✔ |
AG:95 [ARG] | AA:1377 [A] | Ae:145 [ARG] | A2:1679 [A2M] | ✔ |
AG:116 [MET] | AA:1239 [A] | Ae:169 [ILE] | A2:1535 [C] | ❌ 7O7Y_Ae_A2 |
AG:115 [SER] | AA:1239 [A] | Ae:168 [THR] | A2:1535 [C] | ❌ 7O7Y_Ae_A2 |
AG:115 [SER] | AA:1297 [G] | Ae:168 [THR] | A2:1599 [G] | ❌ 7O7Y_Ae_A2 |
AG:115 [SER] | AA:1298 [U] | Ae:168 [THR] | A2:1600 [U] | ❌ 7O7Y_Ae_A2 |
AG:109 [ARG] | AA:1238 [A] | Ae:159 [ARG] | A2:1534 [A] | ❌ 7O7Y_Ae_A2 |
AG:109 [ARG] | AA:1239 [A] | Ae:159 [ARG] | A2:1535 [C] | ❌ 7O7Y_Ae_A2 |
AG:32 [VAL] | AA:1240 [U] | Ae:77 [MET] | A2:1536 [U] | ❌ 7O7Y_Ae_A2 |
AG:102 [ARG] | AA:1376 [U] | Ae:152 [TRP] | A2:1678 [U] | ❌ 7O7Y_Ae_A2 |
AG:114 [LYS] | AA:1297 [G] | Ae:167 [LYS] | A2:1599 [G] | ❌ 7O7Y_Ae_A2 |
AG:114 [LYS] | AA:1298 [U] | Ae:167 [LYS] | A2:1600 [U] | ❌ 7O7Y_Ae_A2 |
AG:25 [LYS] | AA:1375 [A] | Ae:70 [GLU] | A2:1677 [U] | ❌ 7O7Y_Ae_A2 |
AG:30 [LEU] | AA:1240 [U] | Ae:75 [SER] | A2:1536 [U] | ❌ 7O7Y_Ae_A2 |
AG:29 [ILE] | AA:1376 [U] | Ae:74 [ASN] | A2:1678 [U] | ❌ 7O7Y_Ae_A2 |
AG:31 [MET] | AA:1373 [G] | Ae:76 [MET] | A2:1675 [G] | ❌ 7O7Y_Ae_A2 |
AG:31 [MET] | AA:1374 [A] | Ae:76 [MET] | A2:1676 [A] | ❌ 7O7Y_Ae_A2 |
AG:112 [GLY] | AA:1298 [U] | Ae:162 [ALA] | A2:1600 [U] | ❌ 7O7Y_Ae_A2 |
AG:98 [ALA] | AA:1377 [A] | Ae:148 [ASN] | A2:1679 [A2M] | ❌ 4YBB_AG_AA |
AG:112 [GLY] | AA:1240 [U] | Ae:162 [ALA] | A2:1536 [U] | ❌ 4YBB_AG_AA |
AG:112 [GLY] | AA:1239 [A] | Ae:162 [ALA] | A2:1535 [C] | ❌ 4YBB_AG_AA |
AG:113 [ASP] | AA:1239 [A] | Ae:165 [ASN] | A2:1535 [C] | ❌ 4YBB_AG_AA |
AG:114 [LYS] | AA:1240 [U] | Ae:167 [LYS] | A2:1536 [U] | ❌ 4YBB_AG_AA |
AG:25 [LYS] | AA:1374 [A] | Ae:70 [GLU] | A2:1676 [A] | ❌ 4YBB_AG_AA |
AG:29 [ILE] | AA:1373 [G] | Ae:74 [ASN] | A2:1675 [G] | ❌ 4YBB_AG_AA |
AG:30 [LEU] | AA:1375 [A] | Ae:75 [SER] | A2:1677 [U] | ❌ 4YBB_AG_AA |
AG:30 [LEU] | AA:1374 [A] | Ae:75 [SER] | A2:1676 [A] | ❌ 4YBB_AG_AA |
AG:31 [MET] | AA:1240 [U] | Ae:76 [MET] | A2:1536 [U] | ❌ 4YBB_AG_AA |
AG:32 [VAL] | AA:1374 [A] | Ae:77 [MET] | A2:1676 [A] | ❌ 4YBB_AG_AA |
AG:32 [VAL] | AA:1373 [G] | Ae:77 [MET] | A2:1675 [G] | ❌ 4YBB_AG_AA |
AG:33 [ASP] | AA:940 [C] | Ae:83 [ASN] | A2:1223 [G] | ❌ 4YBB_AG_AA |
AG:33 [ASP] | AA:1349 [A] | Ae:83 [ASN] | A2:1651 [A] | ❌ 4YBB_AG_AA |
AG:37 [SER] | AA:1373 [G] | Ae:87 [LEU] | A2:1675 [G] | ❌ 4YBB_AG_AA |
AG:38 [THR] | AA:1241 [G] | Ae:88 [MET] | A2:1537 [G] | ❌ 4YBB_AG_AA |
AG:41 [SER] | AA:1240 [U] | Ae:91 [ARG] | A2:1536 [U] | ❌ 4YBB_AG_AA |
AG:41 [SER] | AA:1241 [G] | Ae:91 [ARG] | A2:1537 [G] | ❌ 4YBB_AG_AA |
AG:78 [ARG] | AA:1381 [U] | Ae:128 [ILE] | A2:1683 [C] | ❌ 7O7Y_Ae:128, 7O7Y_A2:1683 no longer at interface |
AG:79 [ARG] | AA:1381 [U] | Ae:129 [GLY] | A2:1683 [C] | ❌ 7O7Y_Ae:129, 7O7Y_A2:1683 no longer at interface |
AG:80 [VAL] | AA:1381 [U] | Ae:130 [ARG] | A2:1683 [C] | ❌ 7O7Y_A2:1683 no longer at interface |
AG:33 [ASP] | AA:941 [G] | Ae:83 [ASN] | A2:1224 [A] | ❌ 4YBB_AA:941 no longer at interface |
AG:41 [SER] | AA:1292 [G] | Ae:91 [ARG] | A2:1594 [C] | ❌ 4YBB_AA:1292 no longer at interface |
AG:79 [ARG] | AA:1382 [C] | Ae:129 [GLY] | A2:1684 [C] | ❌ 7O7Y_Ae:129 no longer at interface |
AG:24 [ALA] | AA:1375 [A] | Ae:69 [VAL] | A2:1677 [U] | ❌ 7O7Y_Ae:69 no longer at interface |
AG:99 [LEU] | AA:939 [G] | Ae:149 [GLN] | A2:1222 [G] | ❌ 7O7Y_Ae:149 no longer at interface |
AG:28 [ASN] | AA:1374 [A] | Ae:73 [THR] | A2:1676 [A] | ❌ 7O7Y_Ae:73 no longer at interface |
AG:28 [ASN] | AA:1375 [A] | Ae:73 [THR] | A2:1677 [U] | ❌ 7O7Y_Ae:73 no longer at interface |
AG:106 [GLU] | AA:940 [C] | Ae:156 [THR] | A2:1223 [G] | ❌ 7O7Y_Ae:156 no longer at interface |
AG:119 [ARG] | AA:1239 [A] | Ae:172 [CYS] | A2:1535 [C] | ❌ 7O7Y_Ae:172 no longer at interface |
AG:119 [ARG] | AA:1240 [U] | Ae:172 [CYS] | A2:1536 [U] | ❌ 7O7Y_Ae:172 no longer at interface |
AG:76 [LYS] | AA:937 [A] | Ae:126 [THR] | A2:1220 [C] | ❌ 7O7Y_Ae:126 no longer at interface |
AG:76 [LYS] | AA:938 [A] | Ae:126 [THR] | A2:1221 [A] | ❌ 7O7Y_Ae:126 no longer at interface |
AG:76 [LYS] | AA:1378 [C] | Ae:126 [THR] | A2:1680 [A] | ❌ 7O7Y_Ae:126 no longer at interface |
AG:117 [ALA] | AA:1240 [U] | Ae:170 [ALA] | A2:1536 [U] | ❌ 7O7Y_Ae:170 no longer at interface |
AG:77 [SER] | AA:937 [A] | Ae:127 [ARG] | A2:1220 [C] | ❌ 4YBB_AG:77 no longer at interface |
AG:77 [SER] | AA:938 [A] | Ae:127 [ARG] | A2:1221 [A] | ❌ 4YBB_AG:77 no longer at interface |
AG:26 [PHE] | AA:1376 [U] | Ae:71 [ARG] | A2:1678 [U] | ❌ 4YBB_AG:26 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Ribosomal protein S7 | 0.9 | 4.12 | 0.19 | 0.81 | 0.9 | 0.6 | 0.72 | 0.47 | 0.35 | 0.24 | 0.37 |
Other pairs involving 4YBB_AG_AA or 7O7Y_Ae_A2
Total number of entries: 10