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All interfaces > All interologs > Interface groups > group112 > 4YBB_AG_AA vs 7RYG_g_a

Interface analysis


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Licorice
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Licorice
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Common contacts -

4YBB_AG
4YBB_AA
7RYG_g
7RYG_a
Conserved?
AG:33 [ASP] AA:1350 [A] g:33 [ASP] a:1347 [A] ✔
AG:33 [ASP] AA:1351 [U] g:33 [ASP] a:1348 [U] ✔
AG:33 [ASP] AA:1372 [U] g:33 [ASP] a:1369 [U] ✔
AG:115 [SER] AA:1239 [A] g:114 [LYS] a:1236 [A] ✔
AG:115 [SER] AA:1240 [U] g:114 [LYS] a:1237 [U] ✔
AG:115 [SER] AA:1297 [G] g:114 [LYS] a:1294 [G] ✔
AG:36 [LYS] AA:1372 [U] g:35 [LYS] a:1369 [U] ✔
AG:39 [ALA] AA:1240 [U] g:38 [ILE] a:1237 [U] ✔
AG:35 [LYS] AA:1372 [U] g:34 [GLY] a:1369 [U] ✔
AG:3 [ARG] AA:932 [C] g:3 [ARG] a:929 [C] ✔
AG:3 [ARG] AA:933 [G] g:3 [ARG] a:930 [G] ✔
AG:3 [ARG] AA:935 [A] g:3 [ARG] a:932 [A] ✔
AG:3 [ARG] AA:1380 [U] g:3 [ARG] a:1377 [U] ✔
AG:98 [ALA] AA:1376 [U] g:98 [ALA] a:1373 [U] ✔
AG:28 [ASN] AA:1374 [A] g:28 [ASN] a:1371 [A] ✔
AG:28 [ASN] AA:1375 [A] g:28 [ASN] a:1372 [A] ✔
AG:2 [PRO] AA:936 [C] g:2 [PRO] a:933 [C] ✔
AG:2 [PRO] AA:1377 [A] g:2 [PRO] a:1374 [A] ✔
AG:2 [PRO] AA:1378 [C] g:2 [PRO] a:1375 [C] ✔
AG:2 [PRO] AA:1379 [G] g:2 [PRO] a:1376 [G] ✔
AG:2 [PRO] AA:1380 [U] g:2 [PRO] a:1377 [U] ✔
AG:32 [VAL] AA:1240 [U] g:32 [GLN] a:1237 [U] ✔
AG:7 [ILE] AA:1378 [C] g:6 [VAL] a:1375 [C] ✔
AG:38 [THR] AA:1290 [G] g:37 [SER] a:1287 [G] ✔
AG:38 [THR] AA:1291 [U] g:37 [SER] a:1288 [C] ✔
AG:25 [LYS] AA:1375 [A] g:25 [LYS] a:1372 [A] ✔
AG:30 [LEU] AA:1240 [U] g:30 [VAL] a:1237 [U] ✔
AG:117 [ALA] AA:1240 [U] g:116 [MET] a:1237 [U] ✔
AG:29 [ILE] AA:1375 [A] g:29 [HIS] a:1372 [A] ✔
AG:29 [ILE] AA:1376 [U] g:29 [HIS] a:1373 [U] ✔
AG:31 [MET] AA:1373 [G] g:31 [MET] a:1370 [G] ✔
AG:31 [MET] AA:1374 [A] g:31 [MET] a:1371 [A] ✔
AG:95 [ARG] AA:938 [A] g:95 [ARG] a:935 [A] ✔
AG:95 [ARG] AA:939 [G] g:95 [ARG] a:936 [G] ✔
AG:95 [ARG] AA:1376 [U] g:95 [ARG] a:1373 [U] ✔
AG:95 [ARG] AA:1377 [A] g:95 [ARG] a:1374 [A] ✔
AG:6 [VAL] AA:1378 [C] g:5 [ARG] a:1375 [C] ❌ 7RYG_g_a
AG:6 [VAL] AA:1379 [G] g:5 [ARG] a:1376 [G] ❌ 7RYG_g_a
AG:36 [LYS] AA:1373 [G] g:35 [LYS] a:1370 [G] ❌ 7RYG_g_a
AG:36 [LYS] AA:1374 [A] g:35 [LYS] a:1371 [A] ❌ 7RYG_g_a
AG:35 [LYS] AA:1241 [G] g:34 [GLY] a:1238 [G] ❌ 7RYG_g_a
AG:35 [LYS] AA:1289 [A] g:34 [GLY] a:1286 [A] ❌ 7RYG_g_a
AG:35 [LYS] AA:1290 [G] g:34 [GLY] a:1287 [G] ❌ 7RYG_g_a
AG:35 [LYS] AA:1351 [U] g:34 [GLY] a:1348 [U] ❌ 7RYG_g_a
AG:3 [ARG] AA:1379 [G] g:3 [ARG] a:1376 [G] ❌ 7RYG_g_a
AG:5 [ARG] AA:1345 [U] g:4 [ARG] a:1342 [U] ❌ 7RYG_g_a
AG:5 [ARG] AA:1377 [A] g:4 [ARG] a:1374 [A] ❌ 7RYG_g_a
AG:2 [PRO] AA:935 [A] g:2 [PRO] a:932 [A] ❌ 7RYG_g_a
AG:106 [GLU] AA:940 [C] g:105 [VAL] a:937 [C] ❌ 7RYG_g_a
AG:7 [ILE] AA:1377 [A] g:6 [VAL] a:1374 [A] ❌ 7RYG_g_a
AG:38 [THR] AA:1240 [U] g:37 [SER] a:1237 [U] ❌ 7RYG_g_a
AG:29 [ILE] AA:1374 [A] g:29 [HIS] a:1371 [A] ❌ 7RYG_g_a
AG:37 [SER] AA:1290 [G] g:36 [LYS] a:1287 [G] ❌ 7RYG_g_a
AG:37 [SER] AA:1291 [U] g:36 [LYS] a:1288 [C] ❌ 7RYG_g_a
AG:106 [GLU] AA:1240 [U] g:105 [VAL] a:1237 [U] ❌ 4YBB_AG_AA
AG:2 [PRO] AA:933 [G] g:2 [PRO] a:930 [G] ❌ 4YBB_AG_AA
AG:2 [PRO] AA:932 [C] g:2 [PRO] a:929 [C] ❌ 4YBB_AG_AA
AG:25 [LYS] AA:1376 [U] g:25 [LYS] a:1373 [U] ❌ 4YBB_AG_AA
AG:31 [MET] AA:1240 [U] g:31 [MET] a:1237 [U] ❌ 4YBB_AG_AA
AG:35 [LYS] AA:1373 [G] g:34 [GLY] a:1370 [G] ❌ 4YBB_AG_AA
AG:35 [LYS] AA:1350 [A] g:34 [GLY] a:1347 [A] ❌ 4YBB_AG_AA
AG:36 [LYS] AA:1289 [A] g:35 [LYS] a:1286 [A] ❌ 4YBB_AG_AA
AG:36 [LYS] AA:1290 [G] g:35 [LYS] a:1287 [G] ❌ 4YBB_AG_AA
AG:36 [LYS] AA:1241 [G] g:35 [LYS] a:1238 [G] ❌ 4YBB_AG_AA
AG:37 [SER] AA:1373 [G] g:36 [LYS] a:1370 [G] ❌ 4YBB_AG_AA
AG:37 [SER] AA:1374 [A] g:36 [LYS] a:1371 [A] ❌ 4YBB_AG_AA
AG:37 [SER] AA:1372 [U] g:36 [LYS] a:1369 [U] ❌ 4YBB_AG_AA
AG:39 [ALA] AA:1291 [U] g:38 [ILE] a:1288 [C] ❌ 4YBB_AG_AA
AG:39 [ALA] AA:1290 [G] g:38 [ILE] a:1287 [G] ❌ 4YBB_AG_AA
AG:39 [ALA] AA:1241 [G] g:38 [ILE] a:1238 [G] ❌ 4YBB_AG_AA
AG:5 [ARG] AA:933 [G] g:4 [ARG] a:930 [G] ❌ 4YBB_AG_AA
AG:5 [ARG] AA:1092 [A] g:4 [ARG] a:1089 [A] ❌ 4YBB_AG_AA
AG:5 [ARG] AA:1093 [A] g:4 [ARG] a:1090 [A] ❌ 4YBB_AG_AA
AG:5 [ARG] AA:1091 [U] g:4 [ARG] a:1088 [U] ❌ 4YBB_AG_AA
AG:5 [ARG] AA:932 [C] g:4 [ARG] a:929 [C] ❌ 4YBB_AG_AA
AG:6 [VAL] AA:1345 [U] g:5 [ARG] a:1342 [U] ❌ 4YBB_AG_AA
AG:6 [VAL] AA:933 [G] g:5 [ARG] a:930 [G] ❌ 4YBB_AG_AA
AG:115 [SER] AA:1298 [U] g:114 [LYS] a:1295 [U] ❌ 7RYG_a:1295 no longer at interface
AG:3 [ARG] AA:1384 [C] g:3 [ARG] a:1381 [C] ❌ 7RYG_a:1381 no longer at interface
AG:2 [PRO] AA:937 [A] g:2 [PRO] a:934 [A] ❌ 7RYG_a:934 no longer at interface
AG:114 [LYS] AA:1298 [U] g:113 [GLU] a:1295 [U] ❌ 7RYG_g:113, 7RYG_a:1295 no longer at interface
AG:113 [ASP] AA:1298 [U] g:112 [SER] a:1295 [U] ❌ 7RYG_g:112, 7RYG_a:1295 no longer at interface
AG:112 [GLY] AA:1298 [U] g:111 [ARG] a:1295 [U] ❌ 7RYG_g:111, 7RYG_a:1295 no longer at interface
AG:5 [ARG] AA:931 [C] g:4 [ARG] a:928 [C] ❌ 4YBB_AA:931 no longer at interface
AG:41 [SER] AA:1291 [U] g:40 [GLU] a:1288 [C] ❌ 7RYG_g:40 no longer at interface
AG:10 [ARG] AA:1346 [A] g:9 [ALA] a:1343 [A] ❌ 7RYG_g:9 no longer at interface
AG:10 [ARG] AA:1375 [A] g:9 [ALA] a:1372 [A] ❌ 7RYG_g:9 no longer at interface
AG:10 [ARG] AA:1376 [U] g:9 [ALA] a:1373 [U] ❌ 7RYG_g:9 no longer at interface
AG:42 [ILE] AA:1240 [U] g:41 [SER] a:1237 [U] ❌ 7RYG_g:41 no longer at interface
AG:24 [ALA] AA:1375 [A] g:24 [ALA] a:1372 [A] ❌ 7RYG_g:24 no longer at interface
AG:102 [ARG] AA:939 [G] g:101 [MET] a:936 [G] ❌ 7RYG_g:101 no longer at interface
AG:102 [ARG] AA:940 [C] g:101 [MET] a:937 [C] ❌ 7RYG_g:101 no longer at interface
AG:102 [ARG] AA:1375 [A] g:101 [MET] a:1372 [A] ❌ 7RYG_g:101 no longer at interface
AG:102 [ARG] AA:1376 [U] g:101 [MET] a:1373 [U] ❌ 7RYG_g:101 no longer at interface
AG:114 [LYS] AA:1239 [A] g:113 [GLU] a:1236 [A] ❌ 7RYG_g:113 no longer at interface
AG:114 [LYS] AA:1297 [G] g:113 [GLU] a:1294 [G] ❌ 7RYG_g:113 no longer at interface
AG:12 [ILE] AA:1375 [A] g:11 [GLU] a:1372 [A] ❌ 7RYG_g:11 no longer at interface
AG:105 [VAL] AA:1240 [U] g:104 [LEU] a:1237 [U] ❌ 7RYG_g:104 no longer at interface
AG:11 [LYS] AA:1345 [U] g:10 [ARG] a:1342 [U] ❌ 4YBB_AG:11 no longer at interface
AG:11 [LYS] AA:1377 [A] g:10 [ARG] a:1374 [A] ❌ 4YBB_AG:11 no longer at interface
AG:11 [LYS] AA:1375 [A] g:10 [ARG] a:1372 [A] ❌ 4YBB_AG:11 no longer at interface
AG:11 [LYS] AA:1376 [U] g:10 [ARG] a:1373 [U] ❌ 4YBB_AG:11 no longer at interface
AG:11 [LYS] AA:1346 [A] g:10 [ARG] a:1343 [A] ❌ 4YBB_AG:11 no longer at interface
AG:103 [TRP] AA:1375 [A] g:102 [ARG] a:1372 [A] ❌ 4YBB_AG:103 no longer at interface
AG:103 [TRP] AA:1376 [U] g:102 [ARG] a:1373 [U] ❌ 4YBB_AG:103 no longer at interface
AG:103 [TRP] AA:939 [G] g:102 [ARG] a:936 [G] ❌ 4YBB_AG:103 no longer at interface
AG:103 [TRP] AA:940 [C] g:102 [ARG] a:937 [C] ❌ 4YBB_AG:103 no longer at interface
AG:120 [LEU] AA:1239 [A] g:119 [ARG] a:1236 [A] ❌ 4YBB_AG:120 no longer at interface
AG:120 [LEU] AA:1297 [G] g:119 [ARG] a:1294 [G] ❌ 4YBB_AG:120 no longer at interface
AG:120 [LEU] AA:1240 [U] g:119 [ARG] a:1237 [U] ❌ 4YBB_AG:120 no longer at interface
AG:13 [LEU] AA:1375 [A] g:12 [ILE] a:1372 [A] ❌ 4YBB_AG:13 no longer at interface
AG:43 [VAL] AA:1240 [U] g:42 [ILE] a:1237 [U] ❌ 4YBB_AG:43 no longer at interface
AG:8 [GLY] AA:1377 [A] g:7 [VAL] a:1374 [A] ❌ 4YBB_AG:8 no longer at interface
AG:8 [GLY] AA:1378 [C] g:7 [VAL] a:1375 [C] ❌ 4YBB_AG:8 no longer at interface
AG:9 [GLN] AA:1377 [A] g:8 [ALA] a:1374 [A] ❌ 4YBB_AG:9 no longer at interface
AG:92 [ARG] AA:1378 [C] g:92 [ARG] a:1375 [C] ❌ 4YBB_AG:92 no longer at interface
AG:92 [ARG] AA:1377 [A] g:92 [ARG] a:1374 [A] ❌ 4YBB_AG:92 no longer at interface
AG:92 [ARG] AA:1376 [U] g:92 [ARG] a:1373 [U] ❌ 4YBB_AG:92 no longer at interface
AG:94 [VAL] AA:1377 [A] g:94 [SER] a:1374 [A] ❌ 4YBB_AG:94 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S7 Bacterial small subunit ribosomal RNA 0.96 4.99 0.31 0.92 0.97 0.69 0.97 0.41 0.34 0.11 0.51


Other pairs involving 4YBB_AG_AA or 7RYG_g_a

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1g_1a 7RYG_g_a 0.21 0.88 6.23 0.19 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4Y4O_1g_1a 4YBB_AG_AA 0.76 0.96 4.23 0.43 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
6S0X_g_a 7RYG_g_a 0.22 0.95 5.27 0.12 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4YBB_AG_AA 7K00_G_A 0.76 0.97 4.0 0.6 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4YBB_AG_AA 6S0X_g_a 0.72 0.97 3.42 0.54 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4YBB_AG_AA 7O7Y_Ae_A2 0.47 0.9 4.12 0.19 Ribosomal protein S7 compare
4YBB_AG_AA 7RYG_g_a 0.41 0.96 4.99 0.31 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4W2F_AG_AA 4YBB_AG_AA 0.82 0.96 3.89 0.45 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare
4W2F_AG_AA 7RYG_g_a 0.20 0.88 5.56 0.12 Ribosomal protein S7 Bacterial small subunit ribosomal RNA compare